Literature DB >> 32744723

Ending on a high note: Downstream ORFs enhance mRNA translational output.

Samantha Dodbele1, Jeremy E Wilusz1.   

Abstract

Eukaryotic mRNAs were long thought to only translate a single protein product, but it is now recognized that many mRNAs can also encode small open reading frames (ORFs). In this issue of The EMBO Journal, Wu et al characterized small ORFs in the 3' untranslated regions (3' UTRs) of human and zebrafish mRNAs and found that many are indeed translated. The peptides encoded by these downstream ORFs (dORFs) are often poorly conserved across evolution, but many dORFs are nonetheless functional, as the act of their translation can promote translation of the canonical ORF.
© 2020 The Authors.

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Year:  2020        PMID: 32744723      PMCID: PMC7459393          DOI: 10.15252/embj.2020105959

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  11 in total

1.  Pervasive functional translation of noncanonical human open reading frames.

Authors:  Jin Chen; Andreas-David Brunner; J Zachery Cogan; James K Nuñez; Alexander P Fields; Britt Adamson; Daniel N Itzhak; Jason Y Li; Matthias Mann; Manuel D Leonetti; Jonathan S Weissman
Journal:  Science       Date:  2020-03-06       Impact factor: 47.728

2.  Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation.

Authors:  Ariel A Bazzini; Timothy G Johnstone; Romain Christiano; Sebastian D Mackowiak; Benedikt Obermayer; Elizabeth S Fleming; Charles E Vejnar; Miler T Lee; Nikolaus Rajewsky; Tobias C Walther; Antonio J Giraldez
Journal:  EMBO J       Date:  2014-04-04       Impact factor: 11.598

3.  Upstream ORFs are prevalent translational repressors in vertebrates.

Authors:  Timothy G Johnstone; Ariel A Bazzini; Antonio J Giraldez
Journal:  EMBO J       Date:  2016-02-19       Impact factor: 11.598

4.  Multiple upstream AUG codons mediate translational control of GCN4.

Authors:  P P Mueller; A G Hinnebusch
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

5.  Ending on a high note: Downstream ORFs enhance mRNA translational output.

Authors:  Samantha Dodbele; Jeremy E Wilusz
Journal:  EMBO J       Date:  2020-08-03       Impact factor: 11.598

Review 6.  The scanning mechanism of eukaryotic translation initiation.

Authors:  Alan G Hinnebusch
Journal:  Annu Rev Biochem       Date:  2014-01-29       Impact factor: 23.643

7.  Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster.

Authors:  Joshua G Dunn; Catherine K Foo; Nicolette G Belletier; Elizabeth R Gavis; Jonathan S Weissman
Journal:  Elife       Date:  2013-12-03       Impact factor: 8.140

8.  Many lncRNAs, 5'UTRs, and pseudogenes are translated and some are likely to express functional proteins.

Authors:  Zhe Ji; Ruisheng Song; Aviv Regev; Kevin Struhl
Journal:  Elife       Date:  2015-12-19       Impact factor: 8.140

9.  Conservation of uORF repressiveness and sequence features in mouse, human and zebrafish.

Authors:  Guo-Liang Chew; Andrea Pauli; Alexander F Schier
Journal:  Nat Commun       Date:  2016-05-24       Impact factor: 14.919

10.  Translation of small downstream ORFs enhances translation of canonical main open reading frames.

Authors:  Qiushuang Wu; Matthew Wright; Madelaine M Gogol; William D Bradford; Ning Zhang; Ariel A Bazzini
Journal:  EMBO J       Date:  2020-08-03       Impact factor: 11.598

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  1 in total

1.  Ending on a high note: Downstream ORFs enhance mRNA translational output.

Authors:  Samantha Dodbele; Jeremy E Wilusz
Journal:  EMBO J       Date:  2020-08-03       Impact factor: 11.598

  1 in total

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