Literature DB >> 32740003

Precision medicine for pancreatic diseases.

Celeste A Shelton1, David C Whitcomb2.   

Abstract

PURPOSE OF REVIEW: We describe and contrast the strengths of precision medicine with Western medicine, and complex trait genetics with Mendelian genetics. Classic genetics focuses on highly penetrant pathogenic variants in a single gene believed to cause or confer a high risk for well-defined phenotypes. However, a minority of disorders have a single gene cause. Further, even individuals with identical Mendelian disease-associated genotypes may exhibit substantial phenotypic variability indicative of genetic and environmental modifiers. Still, most diseases are considered complex traits (or complex diseases). RECENT
FINDINGS: New insights into the genetic underpinnings of complex traits provide opportunities for advances in diagnosis and management. Precision medicine provides the framework for integrating complex trait knowledge into clinical care through a sophisticated analysis pipeline. Multidimensional modeling of acquired diseases includes multiple genetic risks scattered over many genes and gene regulators that must be interpreted on the basis of functional evidence (e.g., genomics, transcriptomics) with structured models and expert systems; strengthened with machine learning and artificial intelligence. The choice of genotyping approaches (shotgun sequencing, single nucleotide polymorphism chips, targeted panels) is discussed.
SUMMARY: The result of a good precision medicine tool is clinical-decision support and guidance to tackle complex disorders such as pancreatitis, diabetes, and pancreatic cancer oncogenesis.

Entities:  

Mesh:

Year:  2020        PMID: 32740003      PMCID: PMC7748065          DOI: 10.1097/MOG.0000000000000665

Source DB:  PubMed          Journal:  Curr Opin Gastroenterol        ISSN: 0267-1379            Impact factor:   2.741


  45 in total

1.  Standards of medical care in diabetes--2014.

Authors: 
Journal:  Diabetes Care       Date:  2014-01       Impact factor: 19.112

2.  Chronic pancreatitis: An international draft consensus proposal for a new mechanistic definition.

Authors:  David C Whitcomb; Luca Frulloni; Pramod Garg; Julia B Greer; Alexander Schneider; Dhiraj Yadav; Tooru Shimosegawa
Journal:  Pancreatology       Date:  2016-02-16       Impact factor: 3.996

Review 3.  CFTR: A New Horizon in the Pathomechanism and Treatment of Pancreatitis.

Authors:  Péter Hegyi; Michael Wilschanski; Shmuel Muallem; Gergely L Lukacs; Miklós Sahin-Tóth; Aliye Uc; Michael A Gray; Zoltán Rakonczay; József Maléth
Journal:  Rev Physiol Biochem Pharmacol       Date:  2016       Impact factor: 5.545

4.  Variation in the γ-glutamyltransferase 1 gene and risk of chronic pancreatitis.

Authors:  Harrison Brand; Brenda Diergaarde; Michael R O'Connell; David C Whitcomb; Randall E Brand
Journal:  Pancreas       Date:  2013-07       Impact factor: 3.327

5.  International Consensus Guidelines for Risk Factors in Chronic Pancreatitis. Recommendations from the working group for the international consensus guidelines for chronic pancreatitis in collaboration with the International Association of Pancreatology, the American Pancreatic Association, the Japan Pancreas Society, and European Pancreatic Club.

Authors:  Péter Hegyi; Andrea Párniczky; Markus M Lerch; Andrea R G Sheel; Vinciane Rebours; Chris E Forsmark; Marco Del Chiaro; Jonas Rosendahl; Enrique de-Madaria; Ákos Szücs; Kyoichi Takaori; Dhiraj Yadav; Cristian Gheorghe; Zoltán Rakonczay; Xavier Molero; Kazuo Inui; Atsushi Masamune; Carlos Fernandez-Del Castillo; Tooru Shimosegawa; John P Neoptolemos; David C Whitcomb; Miklós Sahin-Tóth
Journal:  Pancreatology       Date:  2020-04-08       Impact factor: 3.996

6.  A conservative assessment of the major genetic causes of idiopathic chronic pancreatitis: data from a comprehensive analysis of PRSS1, SPINK1, CTRC and CFTR genes in 253 young French patients.

Authors:  Emmanuelle Masson; Jian-Min Chen; Marie-Pierre Audrézet; David N Cooper; Claude Férec
Journal:  PLoS One       Date:  2013-08-08       Impact factor: 3.240

7.  SPINK1, PRSS1, CTRC, and CFTR Genotypes Influence Disease Onset and Clinical Outcomes in Chronic Pancreatitis.

Authors:  Wen-Bin Zou; Xin-Ying Tang; Dai-Zhan Zhou; Yang-Yang Qian; Liang-Hao Hu; Fei-Fei Yu; Dong Yu; Hao Wu; Shun-Jiang Deng; Jin-Huan Lin; An-Jing Zhao; Zhen-Hua Zhao; Hong-Yu Wu; Jia-Hui Zhu; Wei Qian; Lei Wang; Lei Xin; Min-Jun Wang; Li-Juan Wang; Xue Fang; Lin He; Emmanuelle Masson; David N Cooper; Claude Férec; Zhao-Shen Li; Jian-Min Chen; Zhuan Liao
Journal:  Clin Transl Gastroenterol       Date:  2018-11-12       Impact factor: 4.488

8.  Artificial intelligence (AI) in healthcare and biomedical research: Why a strong computational/AI bioethics framework is required?

Authors:  Jatinder Bali; Rohit Garg; Renu T Bali
Journal:  Indian J Ophthalmol       Date:  2019-01       Impact factor: 1.848

9.  An integrated encyclopedia of DNA elements in the human genome.

Authors: 
Journal:  Nature       Date:  2012-09-06       Impact factor: 49.962

10.  Mechanisms of CFTR functional variants that impair regulated bicarbonate permeation and increase risk for pancreatitis but not for cystic fibrosis.

Authors:  Jessica LaRusch; Jinsei Jung; Ignacio J General; Michele D Lewis; Hyun Woo Park; Randall E Brand; Andres Gelrud; Michelle A Anderson; Peter A Banks; Darwin Conwell; Christopher Lawrence; Joseph Romagnuolo; John Baillie; Samer Alkaade; Gregory Cote; Timothy B Gardner; Stephen T Amann; Adam Slivka; Bimaljit Sandhu; Amy Aloe; Michelle L Kienholz; Dhiraj Yadav; M Michael Barmada; Ivet Bahar; Min Goo Lee; David C Whitcomb
Journal:  PLoS Genet       Date:  2014-07-17       Impact factor: 5.917

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  1 in total

1.  Constant-severe pain in chronic pancreatitis is associated with genetic loci for major depression in the NAPS2 cohort.

Authors:  Ellyn Dunbar; Phil J Greer; Nadine Melhem; Samer Alkaade; Stephen T Amann; Randall Brand; Gregory A Coté; Christopher E Forsmark; Timothy B Gardner; Andres Gelrud; Nalini M Guda; Jessica LaRusch; Michele D Lewis; Jorge D Machicado; Thiruvengadam Muniraj; Georgios I Papachristou; Joseph Romagnuolo; Bimaljit S Sandhu; Stuart Sherman; Charles M Wilcox; Vikesh K Singh; Dhiraj Yadav; David C Whitcomb
Journal:  J Gastroenterol       Date:  2020-07-17       Impact factor: 6.772

  1 in total

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