| Literature DB >> 32706411 |
Pedro Barrera-López1, Erika D Pérez-Riveros1, José Moreno-Montoya1, Silvia Marcela Ballesteros1, Sergio A Valencia1, José A De la Hoz-Valle1.
Abstract
The pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-Cov-2) has led to the elaboration of multiple studies to increase knowledge and understanding, hence, having the ability to accomplish an adequate and timely diagnosis and give an optimal treatment according to the patient's condition. The clinical manifestations of COVID-19 pose a series of challenges both in understanding and delimiting the disease secondary to the SARS-CoV-2 infection. This is due to the fact that the main axis of this disease is the endothelial compromise and the production of a "cytokine storm," triggering multiple organ failure and death. Given that a complete understanding of its pathophysiology and clinical behavior has not yet been achieved, we wondered if coinfection with other respiratory viruses modifies its performance and outcomes described so far. A literature search was performed, obtaining 68 articles, of which 25 were analyzed. The analysis showed us that there is a high variety both in the types of associated infections and in the clinical behavior of patients and their outcomes. Therefore, we consider that the search for other infections should be performed exhaustively, especially in those cases that may be susceptible to treatment such as Influenza A, human immunodeficiency virus, or bacterial infections. As well as optimize the analysis of these cases and establish if there are characteristics that allow establishing the possibility of carrying an additional infection to that of SARS-CoV-2 and the implications for the management and prognosis of the patient.Entities:
Keywords: SARS coronavirus; coronavirus; human immunodeficiency virus; influenza virus; virus classification
Mesh:
Year: 2020 PMID: 32706411 PMCID: PMC7404860 DOI: 10.1002/jmv.26331
Source DB: PubMed Journal: J Med Virol ISSN: 0146-6615 Impact factor: 20.693
Figure 1Flow chart of article selection
Synthesized data of COVID‐19 and coinfection articles
| Title | Type of study | Journal | DOI | Number of cases (patients) | Country | SARS‐CoV‐2 diagnostic method | Results and findings | Conclusions |
|---|---|---|---|---|---|---|---|---|
| Co‐infection with respiratory pathogens among COVID‐2019 cases | Descriptive | Virus Research | 10.1016/j.virusres.2020.198005 | 257 | China—Jiangsu Province | rRT‐PCR‐SARS‐CoV‐2 | 128 Out of 183 infected men, 113 out of 119 infected women ‐ bacterial co‐infection was the most frequent, mainly by pneumococcus. Under 15 y; 11 pathogens found as a cause of co‐infection, metapneumovirus was found exclusively. 16 to 44 y; 22 pathogens, pneumococcus and | Bacterial and fungal co‐infections were higher in critically ill patients, but there was no statistically significant difference. No clear relationship between co‐infection, ICU admission or mortality. No differences in length of stay and age between the proportions of infection and type of pathogen. |
| Multicentre Italian Study of SARS‐CoV‐2 Infection in Children and Adolescents, Preliminary Data as at 10 April 2020 | Descriptive | Eurosurveillance | 10.2807/1560‐7917.ES.2020.25.18.2000600. | 168 | Italy | rRT‐PCR‐SARS‐CoV‐2 | Reports that includes 11 pediatric hospitals and 51 PICUs—reports 10 patients with co‐infection 3 RSV ‐ 3 Rhinovirus ‐ 2 VEB ‐ 1 Influenza A ‐ 1 Streptococcus pneumoniae | Children and adolescents had a more favorable clinical evolution compared to adults. Consequently, the diagnosis and even the therapeutic approach in children could be more conservative than in adults. |
| Clinical Characteristics and Co‐Infections of 354 Hospitalized Patients With COVID‐19 in Wuhan, China: A Retrospective Cohort Study | Descriptive | Microbes and Infection | 10.1016/j.micinf.2020.05.007 | 354 | China—Renmin Hospital of Wuhan University | rRT‐PCR‐SARS‐CoV‐2 | Co‐infection in 24 patients; identified 13 different pathogens, identified as a risk factor for severity (p: 0.014), higher when there is lymphopenia (p: <0.001) and elevation of D‐dimer (p: <0.001) | Co‐infection can worsen the clinical course of the disease, but other risk markers such as lymphopenia, elevation in D‐dimer and decrease in IL‐10 levels were also identified in these patients. |
| False‐Negative Results of Real‐Time ReverseTranscriptase Polymerase Chain Reaction for Severe Acute Respiratory Syndrome Coronavirus 2: Role of Deep‐Learning‐Based CT Diagnosis and Insights from Two Cases | Case Series | Korean Journal of Radiology | 10.3348/kjr.2020.0146 | 2 (1 with coinfectiown) | China—Beijing Haidian Hospital | rRT‐PCR‐SARS‐CoV‐2 (3 samples to be positive) | 10‐mo‐old male patient with Influenza A (diagnosed 2 wk earlier with PCR‐DNA) with radiological findings: CT ground glass lesions ‐ pneumonia with an occupancy rate of 13.3% | A case series with negative rRT‐PCR had radiological findings with a high suspicion of COVID‐19, which was later confirmed with the repetition of the test. |
| Cluster of Coronavirus Disease 2019 (COVID‐19) in the French Alps, 2020 | Case Series | Clinical infectious diseases: an official publication of the Infectious Diseases Society of America. | 10.1093/cid/ciaa424 | 12 (1 viral co‐infección) | France (Alpes Hotel) | rRT‐PCR‐SARS‐CoV‐2 | Viral co‐infection with Influenza A and Picornavirus (rhinovirus/enterovirus) in the only pediatric patient confirmed by PCR, with favorable evolution and outpatient management | Similarities were found between the viral load of symptomatic and asymptomatic patients, which suggests a potential transmission within the asymptomatic. The fact that an infected child did not transmit the disease despite close interactions within schools suggests a different transmission dynamic in children. |
| COVID‐19 associated pulmonary aspergillosis | Case Series | Mycoses | 10.1111/myc.13096 | 5 | Germany—Hospital of Cologne, Cologne | rRT‐PCR‐SARS‐CoV‐2 | Two women and three men between 73 to 53 y old with identification of Aspergillus by many methods (tracheal aspirate with PCR‐DNA, Ag Galactomannan and culture). All had cardiometabolic comorbidities ‐ COPD and CKD. The radiological finding in all cases was" ground glass "" and in some cases nodular infiltrates and emphysema were evident. All the patients developed ARDS, required ICU management and 1 required ECMO support. | In patients with ARDS due to COVID‐19, invasive pulmonary aspergillosis should be considered and a thorough search for this co‐infection should be made. |
| Co‐infection of Coronavirus Disease 2019 and Influenza A: A Report From Iran | Case Series | Archives of Iranian Medicine | 10.34172/aim.2020.04 | 4 | Iran—Shiraz University of Medical Sciences in southern Iran | rRT‐PCR‐SARS‐CoV‐2 | Two women and two men between 40 and 74 y old, all with Influenza A co‐infection. Only 1 with comorbidities (HT). The radiological findings were disseminated bilaterally in the chest X‐ray and ground glass CT. They have lab results with mild transaminase elevation, only 1 with lymphopenia. Management in hospitalization, general room without complications. | The co‐infection of COVID‐19 and influenza A shows the importance of considering the SARS‐CoV‐2 PCR analysis regardless of other pathogens positive findings. |
| Co‐infection with SARS‐CoV‐2 and Human Metapneumovirus | Case Report | Rhode Island Medical Journal | PMID: 32192233 | 1 | USA—Emergency Department in Rhode Island | rRT‐PCR‐SARS‐CoV‐2 | Case of a 57‐y‐old woman with a history of OSAHS (requiring CPAP management), HT and Hyperlipidemia. Metapneumovirus coinfection was identified in the panel of respiratory pathogens with lymphopenia and chest X‐ray without significant findings. Symptomatic, ambulatory management without complications. | A rare coinfection is reported in an adult patient and it is considered that the algorithms of diagnosis and treatment include the search of other respiratory pathogens. |
| Co‐infection with SARS‐CoV‐2 and Influenza A Virus in Patient with Pneumonia, China | Case Report | Emerging Infectious Diseases | 10.3201/eid2606.200299 | 1 | China‐Japan Friendship Hospital | rRT‐PCR‐SARS‐CoV‐2 | A 69‐y‐old man without comorbidities required 3 RT‐PCR samples for SARS‐CoV‐2 to be positive with a difference of 1 wk, coinfected with Influenza A. The patient had lymphopenia, and CT findings with massive ground glass consolidation in the right lower lobe of the lungs. The disease progressed to ARDS and required ICU. | The case highlights possible joint detection with other respiratory viruses. In addition, rRT‐PCR ‐ SARS‐CoV‐2 showed a low sensitivity, which might complicate the recognition COVID‐19 disease. |
| A Case of Coinfection with SARS‐COV‐2 and Cytomegalovirus in the Era of COVID‐19 | Case Report | European Journal of Case Reports in Internal Medicine | 10.12890/2020_001652 | 1 | Italy—Chieti Hospital | rRT‐PCR‐SARS‐CoV‐2 | A 92‐y‐old female patient, with a history of HT and diabetes mellitus, had lymphopenia and bilateral pneumonia. She also had a positive CMV serology (IgG and IgM), no viral load was measured. The disease progressed to ARDS and dies in the ICU | COVID‐19 is a global disease that has compromised the clinical care and health systems of many countries. Currently there is no concrete evidence in the management of patients and in many cases comorbidities and coinfections complicate the clinical scenario, particularly in the elderly. |
| Co‐infection with SARS‐CoV‐2 and influenza A virus | Case Report | IDCases | 10.1016/j.idcr.2020.e00775 | 1 | Japan—Tokio | rRT‐PCR‐SARS‐CoV‐2 | A 78‐y‐old woman with a history of dyslipidemia and hypothyroidism and was positive to Influenza A coinfection. With radiological findings of crosslinked interstitial radiopacities and ground glass CT scan in right pleura (localized). She did not have major alterations in her lab results, requiring general hospitalization management. | As COVID‐19 cases increase, it will be necessary to thoroughly evaluate the images and other clinical findings to consider possible co‐infections with other respiratory viruses. |
| Case Report: The Importance of Novel Coronavirus Disease (COVID‐19) and Coinfection With Other Respiratory Pathogens in the Current Pandemic | Case Report | The American Journal of Tropical Medicine and Hygiene | 10.4269/ajtmh.20‐0266 | 1 | USA—Illinois | rRT‐PCR‐SARS‐CoV‐2 | A 56‐y‐old female patient with a history of HT in whom group A Streptococcus is identified (rapid test). The chest X‐ray showed small bilateral opacities ‐ CT with small consolidations and ground glass. Patient required ECMO support with subsequent recovery. | The evidence of coinfection between various respiratory pathogens and SARS‐CoV‐2 suggests the use of algorithms where tests for viral respiratory and bacterial pathogens are carried out concomitantly with the SARS‐CoV‐2 test. |
| Coinfection With COVID‐19 and Coronavirus HKU1 ‐ The Critical Need for Repeat Testing if Clinically Indicated | Case Report | Journal of Medical Virology | 10.1002/jmv.25890 | 1 | Singapore | rRT‐PCR‐SARS‐CoV‐2 (three samples to be positive) | A 38‐y‐old female patient without comorbidities with coinfection with coronavirus HCoV‐HKU1 detected through the FilmArray respiratory panel test, required 3 RT‐PCR samples to detect SARS‐CoV‐2; without laboratory alterations and poorly defined bi‐basal chest X‐rays. | Physicians require a high index of suspicion to detect SARS‐CoV‐2 infection and have to be aware of possible infections among SARS‐CoV‐2 to contain and control the spread of COVID‐19. |
| Co‐infection with Influenza A and COVID‐19 | Case Report | European Journal of Case Reports in Internal Medicine | 10.12890/2020_001656 | 1 | USA | rRT‐PCR‐SARS‐CoV‐2 | A 66‐y‐old female patient with history of HT, DM, obesity, heart failure, coronary heart disease, and CKD. Laboratory results without alterations, chest X‐ray with radiopacities in the right base. Influenza A co‐infection was detected by panel of respiratory pathogens. Transfer to ICU where mechanical ventilation was required. | COVID‐19 can coexist with other viral infections and cause similar clinical manifestations. Some of these coinfections have active treatments, others will require supportive management. |
| SARS‐CoV‐2 and Legionella Co‐Infection in a Person Returning From a Nile Cruise | Case Report | Journal of Travel Medicine | 10.1093/jtm/taaa053 | 1 | Japan—Asahi General Hospital | rRT‐PCR‐SARS‐CoV‐2 | An 80‐y‐old male patient with a history of diabetes mellitus and benign prostatic hypertrophy with Legionella pneumophila (urinary antigen ‐ serotype 1) infection is in a deleterious course with respiratory failure and dies in the ICU. | Expand the research for co‐infections that may occur with the COVID‐19 disease, especially those susceptible to treatment. |
| Co‐Infection with SARS‐COV‐2 and Parainfluenza in a young adult patient with pneumonia: Case Report | Case Report | IDCases | 10.1016/j.idcr.2020.e00762 | 1 | USA—Florida | rRT‐PCR‐SARS‐CoV‐2 (two samples to be positive) | A 21‐y‐old male patient with a history of consumption of psychoactive substances and an active smoker, with Parainfluenza 4 infection in a panel of respiratory pathogens, presented with elevation of C‐reactive protein, procalcitonin and ferritin, chest X‐ray showed bilateral opacities that progressively worsened and showed CT scan with multiple consolidations and ground glass. He had respiratory failure and required transfer to ICU and noninvasive mechanical ventilation‐ adequate recovery. | The case represents the importance of rapid diagnosis and recognition of possible co‐infections with other respiratory viruses. |
| A Case of COVID‐19 and Pneumocystis jirovecii Co‐infection | Case Report | American Journal of Respiratory and Critical Care Medicine | 10.1164/rccm.202003‐0766LE | 1 | USA—Boston, MA | rRT‐PCR‐SARS‐CoV‐2 | An 80‐y‐old female patient with a history of ulcerative colitis and mitral valve prolapse, presents lymphopenia, elevated C‐reactive protein and evidence of bilateral ground glass, atelectatic bands, nodular infiltrates, and CT consolidation. In addition, she had elevated levels of β‐ D‐glucan, reason why tracheal aspirate was performed with detection of Pneumocystis jirovecii by PCR. With deterioration to ARDS, required transfer to ICU and mechanical ventilation. | A high risk of coinfection is found in patients with COVID‐19 including Pneumocystis jirovecii, which should be suspected in patients with a suggestive risk or clinical history, not only to adjust the management but to define the relevant isolation. |
| Orbital cellulitis, sinusitis and intracranial abnormalities in two adolescents with COVID‐19 | Case Series | Orbit | 10.1080/01676830.2020.1768560 | 2 | USA—New Jersey | rRT‐PCR‐SARS‐CoV‐2 | A 12 and 15‐y‐old male patients with bacterial sinusitis infection, without clear identification of the germs. One of the patients had Streptococcus B‐hemolytic group C in the throat, require management in general hospitalization. | We present 2 cases of periorbital cellulitis with an unusual evolution concomitant to SARS‐CoV‐2 infection. It is unknown if this association is mere coincidences or reflects a potentiation or exacerbation of bacterial infection secondary to COVID‐19. |
| Co‐infection With COVID‐19 and Influenza A Virus in Two Died Patients With Acute Respiratory Syndrome, Bojnurd, Iran | Letter to the Editor | Journal of Medical Virology | 10.1002/jmv.26014 | 2 | Iran—Bojnurd | rRT‐PCR‐SARS‐CoV‐2 | Two patients between 78 and 75 y old, (woman and man) the first with a history of COPD, both with isolation of influenza A (H1N1) had lymphopenia and the CT scans showed bilateral multifocal ground glass opacities with peripheral distribution with mild interlobular septal thickening, and opacification of the acinar center ground glass with peripheral distribution and interlobular septal thickening. Both patients died. | The findings consider other respiratory viruses in patients with suspected COVID‐19 since coinfection can worsen the evolution of the patients and even lead to death. |
| HIV/SARS‐CoV‐2 Coinfected Patients in Istanbul, Turkey | Case Series | Journal of Medical Virology | 10.1002/jmv.25955 | 4 | Istanbul Turkey | rRT‐PCR‐SARS‐CoV‐2; two patients with SARSCov2 IgM + IgG serology (seventh day) | 4 male patients between 34 and 44 y old with history of HIV diagnosed between 12 and 2 y earlier, one without treatment with a history of bipolar affective disorder, another with obesity and diabetes, the rest without comorbidities. Patients treated with adequate disease control, normal CD4 count ‐ undetectable viral load. All with evidence of ground glass lesion on CT, in addition to this one of the patients had alveolar‐occupying viral pneumonia with a tendency to bilateral consolidation. 3 of them required management in general hospitalization with favorable evolution including the patient without treatment for his HIV disease, one patient died in ICU | Antibody formation to SARS‐CoV‐2 is found in survivors, similar to HIV‐free patients. The presence of comorbidities is likely an important factor in mortality in HIV/SARS‐CoV‐2 co‐infected cases. Therefore, to reduce mortality, it is necessary to control them mainly in patients who are aging. |
| Early virus clearance and delayed antibody response in a case of COVID‐19 with a history of co‐infection with HIV‐1 and HCV | Case Report | Clinical infectious diseases: an official publication of the Infectious Diseases Society of America. | 10.1093/cid/ciaa408 | 1 | China—Shenzhen Third People's Hospital | SARSCov2 IgM + IgG rRT‐PCR‐SARS‐CoV‐2 (three negative samples) | A 38‐y‐old male patient with a history of treated HVC, and HIV, had a suggestive clinical history of COVID‐19 with negative RT‐PCR but seroconversion, normal laboratories including lymphocyte counts with a finding pneumonia on CT. Favorable evolution required general hospitalization. | The first case of COVID‐19 with co‐infection of HIV‐1 and HCV is reported, with a rapid virus clearance possibly mediated by antiretroviral drugs and a delayed response in the detection of specific antibodies for possible immune dysfunction mediated by HIV‐1. |
| One Case of Coronavirus Disease 2019 (COVID‐19) in a patient coinfected by HIV With a Low CD4+ T‐cell Count | Case Report | International Journal of Infectious Diseases | 10.1016/j.ijid.2020.04.060 | 1 | China—Wuhan Huo Shen Shan Hoapital | rRT‐PCR‐SARS‐CoV‐2 (5 samples to be positive) IgM SARS‐CoV‐2 | A 34‐y‐old male patient with a history of HIV in treatment presented with suggestive COVID‐19 symptoms. He had a low CD4 count, C‐reactive protein, high LDH, and GGT, with subsequent elevation in IL‐6; he required multiple RT‐PCR samples to detect SARS‐CoV‐2. CT showed ground glass lesions ‐ small scattered consolidations. Requires general hospitalization, and was finally discharged. | Patients infected with SARS‐Cov‐2 and HIV have longer periods of illness and slower generation of specific antibodies. In case of suspicion of COVID‐19, detection by RT‐PCT and subsequent detection of antibodies allow confirming the diagnosis. SARS‐Cov‐2 can especially damage T lymphocytes, further compromising immunity in this type of patient. |
| Description of COVID‐19 in HIV‐infected individuals: a single‐centre, prospective cohort | Cohort Study | The lancet. HIV. | 10.1016/S2352‐3018(20)30164‐8 | 51 | Spain—Hospital Universitario Ramón y Cajal | RT‐PCR‐SARS‐CoV‐2 in 35 patients 16 compatible clinical manifestation | Adult patients (53 ± 9.5 y) with a ratio of 5.3 men for each woman, 55% required hospitalization, 12% had a severe condition, and 4% (2 patients died). Patients coinfected with HIV/SARS‐CoV‐2 showed a higher proportion of comorbidities (HT, diabetes and CKD), as well as higher body mass index. They were treated with Tenofovir. In confirmed cases there was evidence of elevation in transaminases, LDH and dimer D, as well as progression to respiratory failure, compared to suspicious cases. | HIV infection does not protect against SARS‐CoV‐2 infection or reduces the risk of serious disease. Comorbidities continue to be a determining factor in the severity of patients. |
| Clinical features and outcome of HIV/SARS‐CoV‐2 coinfected patients in the Bronx, New York City | Serie de Casos | Journal of Medical Virology | 10.1002/jmv.26077 | 9 | USA—New York City, Bronx | rRT‐PCR‐SARS‐CoV‐2 | Seven men and two women between 31 to 76 y old, all with comorbidities including, HT, diabetes mellitus, obesity and dyslipidemia. 7 died, all of them carried an undetectable viral load. The CD4 count was between 425‐636 in survivors and between 179 to 1827 among patients who died. | They report a higher mortality in patients with HIV‐SARS‐CoV‐2 co‐infection with a possible inversely proportional relationship between CD4 count and mortality, but all patients had comorbidities as risk factors. |
| Computed Tomography Imaging of an HIV‐infected Patient with Coronavirus Disease 2019 (COVID‐19) | Case Report | Journal of Medical Virology | 10.1002/jmv.25879 | 1 | China—Guiyang | rRT‐PCR‐SARS‐CoV‐2 | 24‐y‐old male patient with a history of HIV 2 y ago in antiretroviral management, did not have alterations in the laboratories results and the CT findings showed irregular shaded lesions in the peripheral lung, compromising the interlobar fissure, with a tendency to complete resolution in 15 d. | This report works as a reference for other possible chest tomography findings other than the ground glass pattern reported in HIV and SARS‐CoV‐2 co‐infection. |
Abbreviations: HIV, human immunodeficiency virus; IgG, immunoglobulin G; IgM, immunoglobulin M; IL, interleukin; PCR, polymerase chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2.