Literature DB >> 32701058

Combining agent-based, trait-based and demographic approaches to model coral-community dynamics.

Jason Pither1,2,3, Lael Parrott1,2,3, Bruno Sylvain Carturan1, Jean-Philippe Maréchal4, Corey Ja Bradshaw5.   

Abstract

The complexity of coral-reef ecosystems makes it challenging to predict their dynamics and resilience under future disturbance regimes. Models for coral-reef dynamics do not adequately account for the high functional diversity exhibited by corals. Models that are ecologically and mechanistically detailed are therefore required to simulate the ecological processes driving coral reef dynamics. Here, we describe a novel model that includes processes at different spatial scales, and the contribution of species' functional diversity to benthic-community dynamics. We calibrated and validated the model to reproduce observed dynamics using empirical data from Caribbean reefs. The model exhibits realistic community dynamics, and individual population dynamics are ecologically plausible. A global sensitivity analysis revealed that the number of larvae produced locally, and interaction-induced reductions in growth rate are the parameters with the largest influence on community dynamics. The model provides a platform for virtual experiments to explore diversity-functioning relationships in coral reefs.
© 2020, Carturan et al.

Entities:  

Keywords:  agent-based model; biodiversity; computational biology; coral; ecology; ecosystem functioning; functional traits; resilience; systems biology

Mesh:

Year:  2020        PMID: 32701058      PMCID: PMC7473774          DOI: 10.7554/eLife.55993

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  105 in total

1.  Indirect effects of algae on coral: algae-mediated, microbe-induced coral mortality.

Authors:  Jennifer E Smith; Morrigan Shaw; Rob A Edwards; David Obura; Olga Pantos; Enric Sala; Stuart A Sandin; Steven Smriga; Mark Hatay; Forest L Rohwer
Journal:  Ecol Lett       Date:  2006-07       Impact factor: 9.492

2.  Dynamics and impact of the coral disease white plague: insights from a simulation model.

Authors:  Marilyn E Brandt; John W McManus
Journal:  Dis Aquat Organ       Date:  2009-11-16       Impact factor: 1.802

3.  Flattening of Caribbean coral reefs: region-wide declines in architectural complexity.

Authors:  Lorenzo Alvarez-Filip; Nicholas K Dulvy; Jennifer A Gill; Isabelle M Côté; Andrew R Watkinson
Journal:  Proc Biol Sci       Date:  2009-06-10       Impact factor: 5.349

4.  Catastrophes, phase shifts, and large-scale degradation of a Caribbean coral reef.

Authors:  T P Hughes
Journal:  Science       Date:  1994-09-09       Impact factor: 47.728

5.  Evaluating life-history strategies of reef corals from species traits.

Authors:  Emily S Darling; Lorenzo Alvarez-Filip; Thomas A Oliver; Timothy R McClanahan; Isabelle M Côté; David Bellwood
Journal:  Ecol Lett       Date:  2012-09-03       Impact factor: 9.492

6.  Biogeographical disparity in the functional diversity and redundancy of corals.

Authors:  Mike McWilliam; Mia O Hoogenboom; Andrew H Baird; Chao-Yang Kuo; Joshua S Madin; Terry P Hughes
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

7.  Global warming impairs stock-recruitment dynamics of corals.

Authors:  Terry P Hughes; James T Kerry; Andrew H Baird; Sean R Connolly; Tory J Chase; Andreas Dietzel; Tessa Hill; Andrew S Hoey; Mia O Hoogenboom; Mizue Jacobson; Ailsa Kerswell; Joshua S Madin; Abbie Mieog; Allison S Paley; Morgan S Pratchett; Gergely Torda; Rachael M Woods
Journal:  Nature       Date:  2019-04-03       Impact factor: 49.962

8.  Larval settlement: the role of surface topography for sessile coral reef invertebrates.

Authors:  Steve Whalan; Muhammad A Abdul Wahab; Susanne Sprungala; Andrew J Poole; Rocky de Nys
Journal:  PLoS One       Date:  2015-02-11       Impact factor: 3.240

9.  Competitive interactions between corals and turf algae depend on coral colony form.

Authors:  Thomas Swierts; Mark Ja Vermeij
Journal:  PeerJ       Date:  2016-05-10       Impact factor: 2.984

10.  Delivering the promises of trait-based approaches to the needs of demographic approaches, and vice versa.

Authors:  Roberto Salguero-Gómez; Cyrille Violle; Olivier Gimenez; Dylan Childs
Journal:  Funct Ecol       Date:  2018-06-17       Impact factor: 5.608

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  2 in total

1.  Combining agent-based, trait-based and demographic approaches to model coral-community dynamics.

Authors:  Jason Pither; Lael Parrott; Bruno Sylvain Carturan; Jean-Philippe Maréchal; Corey Ja Bradshaw
Journal:  Elife       Date:  2020-07-23       Impact factor: 8.140

2.  The war of corals: patterns, drivers and implications of changing coral competitive performances across reef environments.

Authors:  Mohsen Kayal; Mehdi Adjeroud
Journal:  R Soc Open Sci       Date:  2022-06-15       Impact factor: 3.653

  2 in total

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