Literature DB >> 32698018

Rational Design of Bioavailable Photosensitizers for Manipulation and Imaging of Biological Systems.

Thomas C Binns1, Anthony X Ayala2, Jonathan B Grimm2, Ariana N Tkachuk2, Guillaume A Castillon3, Sebastien Phan3, Lixia Zhang2, Timothy A Brown2, Zhe Liu2, Stephen R Adams4, Mark H Ellisman3, Minoru Koyama2, Luke D Lavis5.   

Abstract

Light-mediated chemical reactions are powerful methods for manipulating and interrogating biological systems. Photosensitizers, compounds that generate reactive oxygen species upon excitation with light, can be utilized for numerous biological experiments, but the repertoire of bioavailable photosensitizers is limited. Here, we describe the synthesis, characterization, and utility of two photosensitizers based upon the widely used rhodamine scaffold and demonstrate their efficacy for chromophore-assisted light inactivation, cell ablation in culture and in vivo, and photopolymerization of diaminobenzidine for electron microscopy. These chemical tools will facilitate a broad range of applications spanning from targeted destruction of proteins to high-resolution imaging.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  HaloTag; Janelia Fluor; cell ablation; electron microscopy; fluorescence; photochemistry; photosensitizer; reactive oxygen species; rhodamine

Mesh:

Substances:

Year:  2020        PMID: 32698018      PMCID: PMC7483975          DOI: 10.1016/j.chembiol.2020.07.001

Source DB:  PubMed          Journal:  Cell Chem Biol        ISSN: 2451-9448            Impact factor:   8.116


  70 in total

1.  Fluorophore-assisted light inactivation: a high-throughput tool for direct target validation of proteins.

Authors:  Stefan Beck; Takashi Sakurai; Brenda K Eustace; Gerald Beste; Robert Schier; Fritz Rudert; Daniel G Jay
Journal:  Proteomics       Date:  2002-03       Impact factor: 3.984

2.  Quantification of Protein Levels in Single Living Cells.

Authors:  Chiu-An Lo; Ibrahim Kays; Farida Emran; Tsung-Jung Lin; Vedrana Cvetkovska; Brian Edwin Chen
Journal:  Cell Rep       Date:  2015-12-10       Impact factor: 9.423

3.  Scattering of exciting light by live cells in fluorescence confocal imaging: phototoxic effects and relevance for FRAP studies.

Authors:  Jurek W Dobrucki; Dorota Feret; Anna Noatynska
Journal:  Biophys J       Date:  2007-04-06       Impact factor: 4.033

4.  A genetically encoded photosensitizer.

Authors:  Maria E Bulina; Dmitriy M Chudakov; Olga V Britanova; Yurii G Yanushevich; Dmitry B Staroverov; Tatyana V Chepurnykh; Ekaterina M Merzlyak; Maria A Shkrob; Sergey Lukyanov; Konstantin A Lukyanov
Journal:  Nat Biotechnol       Date:  2005-12-20       Impact factor: 54.908

5.  Optical inactivation of synaptic AMPA receptors erases fear memory.

Authors:  Kiwamu Takemoto; Hiroko Iwanari; Hirobumi Tada; Kumiko Suyama; Akane Sano; Takeharu Nagai; Takao Hamakubo; Takuya Takahashi
Journal:  Nat Biotechnol       Date:  2016-12-05       Impact factor: 54.908

6.  Fiji: an open-source platform for biological-image analysis.

Authors:  Johannes Schindelin; Ignacio Arganda-Carreras; Erwin Frise; Verena Kaynig; Mark Longair; Tobias Pietzsch; Stephan Preibisch; Curtis Rueden; Stephan Saalfeld; Benjamin Schmid; Jean-Yves Tinevez; Daniel James White; Volker Hartenstein; Kevin Eliceiri; Pavel Tomancak; Albert Cardona
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

7.  Rapid killing of single neurons by irradiation of intracellularly injected dye.

Authors:  J P Miller; A Selverston
Journal:  Science       Date:  1979-11-09       Impact factor: 47.728

Review 8.  Molecular Tools to Generate Reactive Oxygen Species in Biological Systems.

Authors:  Ying Xiong; Xiaodong Tian; Hui-Wang Ai
Journal:  Bioconjug Chem       Date:  2019-04-22       Impact factor: 4.774

9.  Directed evolution of APEX2 for electron microscopy and proximity labeling.

Authors:  Stephanie S Lam; Jeffrey D Martell; Kimberli J Kamer; Thomas J Deerinck; Mark H Ellisman; Vamsi K Mootha; Alice Y Ting
Journal:  Nat Methods       Date:  2014-11-24       Impact factor: 28.547

10.  A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins.

Authors:  Gražvydas Lukinavičius; Keitaro Umezawa; Nicolas Olivier; Alf Honigmann; Guoying Yang; Tilman Plass; Veronika Mueller; Luc Reymond; Ivan R Corrêa; Zhen-Ge Luo; Carsten Schultz; Edward A Lemke; Paul Heppenstall; Christian Eggeling; Suliana Manley; Kai Johnsson
Journal:  Nat Chem       Date:  2013-01-06       Impact factor: 24.427

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  5 in total

1.  4-Hydroxyl-oxoisoaporphine, one small molecule as theranostic agent for simultaneous fluorescence imaging and photodynamic therapy as type II photosensitizer.

Authors:  Qi Xu; Yunfan Ji; Meijun Chen; Xusheng Shao
Journal:  Photochem Photobiol Sci       Date:  2021-03-20       Impact factor: 3.982

2.  Balanced Intersystem Crossing in Iodinated Silicon-Fluoresceins Allows New Class of Red Shifted Theranostic Agents.

Authors:  Sultan Cetin; Zubeyir Elmazoglu; Osman Karaman; Hande Gunduz; Gorkem Gunbas; Safacan Kolemen
Journal:  ACS Med Chem Lett       Date:  2021-03-16       Impact factor: 4.345

3.  Optical manipulation of molecular function by chromophore-assisted light inactivation.

Authors:  Kiwamu Takemoto
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2021       Impact factor: 3.493

4.  Subcellular Singlet Oxygen and Cell Death: Location Matters.

Authors:  Pingping Liang; Dmytro Kolodieznyi; Yehuda Creeger; Byron Ballou; Marcel P Bruchez
Journal:  Front Chem       Date:  2020-11-17       Impact factor: 5.221

Review 5.  How Single-Molecule Localization Microscopy Expanded Our Mechanistic Understanding of RNA Polymerase II Transcription.

Authors:  Peter Hoboth; Ondřej Šebesta; Pavel Hozák
Journal:  Int J Mol Sci       Date:  2021-06-22       Impact factor: 5.923

  5 in total

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