Literature DB >> 32696393

Recording In-Cell NMR-Spectra in Living Mammalian Cells.

Irena Matečko-Burmann1,2, Björn M Burmann3,4.   

Abstract

At the foundation of many cellular processes as well as a large number of diseases is the (mis)folding of important intrinsically disordered proteins (IDPs). Despite tremendous scientific efforts, the factors driving their structural changes within the cellular context remain poorly understood. In-cell NMR spectroscopy enables investigation of IDPs directly in the living eukaryotic cell enabling investigation of its intermolecular interactions and ensuing modifications at an unprecedented atomic resolution. In the following protocol, we describe how to prepare in-cell NMR samples of IDPs within eukaryotic cells and how to measure these in-cell NMR samples of an IDP in its natural environment, the living mammalian cell. Furthermore, we outline a procedure to assess the intracellular recombinant protein concentration of the studied IDP based on in-cell NMR methods. We use α-synuclein as a model protein, but the presented approach is highly modular and therefore should be easily adapted and altered to the desired needs for the studies of different IDPs.

Entities:  

Keywords:  Cellular concentration determination; Electroporation; IDPs; Intrinsically disordered proteins; Isotope labeling; Mammalian cell culture; Recombinant protein; Solution NMR; α-synuclein

Mesh:

Substances:

Year:  2020        PMID: 32696393     DOI: 10.1007/978-1-0716-0524-0_44

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  21 in total

1.  Quantitative NMR analysis of the protein G B1 domain in Xenopus laevis egg extracts and intact oocytes.

Authors:  Philipp Selenko; Zach Serber; Bedrick Gadea; Joan Ruderman; Gerhard Wagner
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-27       Impact factor: 11.205

2.  Folding of the Tau Protein on Microtubules.

Authors:  Harindranath Kadavath; Mariusz Jaremko; Łukasz Jaremko; Jacek Biernat; Eckhard Mandelkow; Markus Zweckstetter
Journal:  Angew Chem Int Ed Engl       Date:  2015-06-19       Impact factor: 15.336

Review 3.  Intrinsically disordered proteins in cellular signalling and regulation.

Authors:  Peter E Wright; H Jane Dyson
Journal:  Nat Rev Mol Cell Biol       Date:  2015-01       Impact factor: 94.444

Review 4.  Intrinsically disordered proteins: regulation and disease.

Authors:  M Madan Babu; Robin van der Lee; Natalia Sanchez de Groot; Jörg Gsponer
Journal:  Curr Opin Struct Biol       Date:  2011-04-20       Impact factor: 6.809

Review 5.  The many faces of α-synuclein: from structure and toxicity to therapeutic target.

Authors:  Hilal A Lashuel; Cassia R Overk; Abid Oueslati; Eliezer Masliah
Journal:  Nat Rev Neurosci       Date:  2013-01       Impact factor: 34.870

6.  Bronchopulmonary infection due to Branhamella catarrhalis.

Authors:  D T McLeod; F Ahmad; J T Power; M A Calder; A Seaton
Journal:  Br Med J (Clin Res Ed)       Date:  1983-11-12

Review 7.  Intrinsically disordered proteins in human diseases: introducing the D2 concept.

Authors:  Vladimir N Uversky; Christopher J Oldfield; A Keith Dunker
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

8.  Tight regulation of unstructured proteins: from transcript synthesis to protein degradation.

Authors:  Jörg Gsponer; Matthias E Futschik; Sarah A Teichmann; M Madan Babu
Journal:  Science       Date:  2008-11-28       Impact factor: 47.728

9.  100 years of Lewy pathology.

Authors:  Michel Goedert; Maria Grazia Spillantini; Kelly Del Tredici; Heiko Braak
Journal:  Nat Rev Neurol       Date:  2012-11-27       Impact factor: 42.937

10.  The unfoldomics decade: an update on intrinsically disordered proteins.

Authors:  A Keith Dunker; Christopher J Oldfield; Jingwei Meng; Pedro Romero; Jack Y Yang; Jessica Walton Chen; Vladimir Vacic; Zoran Obradovic; Vladimir N Uversky
Journal:  BMC Genomics       Date:  2008-09-16       Impact factor: 3.969

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