Ira Ben Shir1, Shifi Kababya1, David B Zax2, Asher Schmidt1. 1. Schulich Faculty of Chemistry and Russell Berrie Nanotechnology Institute, Technion-Israel Institute of Technology, Technion City, Haifa 32000, Israel. 2. Department of Chemistry & Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States.
Abstract
In many marine organisms, biomineralization-the crystallization of calcium-based ionic lattices-demonstrates how regulated processes optimize for diverse functions, often via incorporation of agents from the precipitation medium. We study a model system consisting of l-aspartic acid (Asp) which when added to the precipitation solution of calcium carbonate crystallizes the thermodynamically disfavored polymorph vaterite. Though vaterite is at best only kinetically stable, that stability is tunable, as vaterite grown with Asp at high concentration is both thermally and temporally stable, while vaterite grown at 10-fold lower Asp concentration, yet 2-fold less in the crystal, spontaneously transforms to calcite. Solid-state NMR shows that Asp is sparsely occluded within vaterite and calcite. CP-REDOR NMR reveals that each Asp is embedded in a perturbed occlusion shell of ∼8 disordered carbonates which bridge to the bulk. In both the as-deposited vaterites and the evolved calcite, the perturbed shell contains two sets of carbonate species distinguished by their proximity to the amine and identifiable based on 13C chemical shifts. The embedding shell and the occluded Asp act as an integral until which minimally rearranges even as the bulk undergoes extensive reorganization. The resilience of these occlusion units suggests that large Asp-free domains drive the vaterite to calcite transformation-which are retarded by the occlusion units, resulting in concentration-dependent lattice stability. Understanding the structure and properties of the occlusion unit, uniquely amenable to ssNMR, thus appears to be a key to explaining other macroscopic properties, such as hardness.
In many marine organisms, biomineralization-the crystallization of calcium-based ionic lattices-demonstrates how regulated processes optimize for diverse functions, often via incorporation of agents from the precipitation medium. We study a model system consisting of l-aspartic acid (Asp) which when added to the precipitation solution of calcium carbonate crystallizes the thermodynamically disfavored polymorph vaterite. Though vaterite is at best only kinetically stable, that stability is tunable, as vaterite grown with Asp at high concentration is both thermally and temporally stable, while vaterite grown at 10-fold lower Asp concentration, yet 2-fold less in the crystal, spontaneously transforms to calcite. Solid-state NMR shows that Asp is sparsely occluded within vaterite and calcite. CP-REDOR NMR reveals that each Asp is embedded in a perturbed occlusion shell of ∼8 disordered carbonates which bridge to the bulk. In both the as-deposited vaterites and the evolved calcite, the perturbed shell contains two sets of carbonate species distinguished by their proximity to the amine and identifiable based on 13C chemical shifts. The embedding shell and the occluded Asp act as an integral until which minimally rearranges even as the bulk undergoes extensive reorganization. The resilience of these occlusion units suggests that large Asp-free domains drive the vaterite to calcite transformation-which are retarded by the occlusion units, resulting in concentration-dependent lattice stability. Understanding the structure and properties of the occlusion unit, uniquely amenable to ssNMR, thus appears to be a key to explaining other macroscopic properties, such as hardness.
Crystalline calciumcarbonate is the most widespread[1−4] of minerals synthesized by marine organisms. In most
systems, the
final products are aragonite and/or calcite, though mechanistically
the initial product is typically a highly disordered amorphous calciumcarbonate (ACC).[5−7] Vaterite, a third polymorph, is unstable with respect
to either calcite or aragonite, and though it is a frequent intermediate,
it is rarely the final product.[8] Control
over the crystallization pathway is essential so as to achieve “cost-effective”
processing and/or to equip the final product with designated special
properties and functionalities. For example, soluble ACC is stabilized
in gastroliths by trapped phosphate anions, whereas in sea urchins
transient ACC is cast first and then subsequently transformed into
calcite spicules.[7,9−12]One mechanism of control
is the interaction of the growing inorganic
phase with biomolecules which serve to regulate both early and late
crystal growth events, including prenucleation cluster formation.[13−15] As the growth processes may well incorporate these biomolecules
within the solid lattice, their influence may be long-lived.[16,17] Even where the incorporated organic matter represents a quite small
contribution to the total (e.g., as little as 0.1 wt %), the resulting
nanocomposites demonstrate improved physical properties in multiple
dimensions, including fracture behavior, hardness, lattice strain,
texture, solubility, and more.[5,18−21]Bio-organics extracted from biogenic calcium carbonates are
typically
proteinaceous[22,23] and often rich in those amino
acids with acidic side chains (Asp and Glu).[24,25] While local order must inevitably be disrupted so as to incorporate
foreign species, the resulting mesocrystalline material diffracts
as if it were single crystalline,[26−29] even where upon finer examination
it is clear that there are small lattice distortions attributable
to the incorporated organic additives.[30,31] As yet, the
description of the interaction interface between mineral and occluded
bio-organic molecules is unavailable; experimental access is made
more difficult as these interfacial regions are scarce within the
bulk; their location is unpredictable, and the interfaces are disordered.
As such the notion of intracrystalline occlusion,
although broadly and loosely used, remains obscure and devoid of the
essential physicochemical description. Characterization is therefore
a formidable challenge for traditional X-ray diffraction and absorption
techniques.[32] The important roles of these
interfaces are widely recognized and were also alluded to in a recent
study of Asp and Gly occlusion within calcite where improved mechanical
properties were attributed to the dissipation of energy within the
occluded molecular species.[18]Solid-state
NMR techniques are well and uniquely equipped to probe
the interface between inorganic and organic components, and to focus
on the rare occluded molecules buried within the lattice.[33−42] The interface—that region where the perturbative effects
of the occluded organic appear—plays a special role in determining
how the composite differs from unperturbed bulk systems. Our main
interface-specific tool is the dipole–dipole coupling by which
one nuclear spin species feels the presence of a nearby nuclear spin,
over lengths comparable to a unit cell dimension (<1 nm). Thus,
although our sensitivity is heavily influenced by the tools with which
we probe the interface structure, conveniently for us we will find
below not only that those dimensions are “reasonable”
and comparable to typical unit cell dimensions, but moreover that
at the longest distances we can probe the local electronic environment
which would appear to be substantially relaxed back toward the bulk.
More importantly, experimental techniques exist so that it is possible
to switch these dipole–dipole couplings on and off, and to
choose to observe the effects from nuclear reporters chosen from either
the carbonate phase or the occluded amino acids. A comparison between
the signals thus observed both “without” and “with”
the dipole–dipole couplings, and in particular the difference
spectrum, represents only those NMR-active species which appear in
the vicinity of others, thus allowing the study of inorganic–bio-organic
interactions.13C MAS NMR spectroscopy is an established
technique
useful in the characterization of both long-range order in the crystalline
polymorphs and short-range order in the amorphous forms of calciumcarbonates.[43−47] In bulk calcium carbonates, 13C direct excitation (DE)
MAS spectra quantitatively reveal the distribution of all chemical
environments.[44,47−49] Combining cross-polarization
(CP) with MAS enhances selectively the spectroscopic signature of 13C’s found in hydrogen-rich environments; indeed, most
of the available direct evidence characterizing the disordered interfaces
in biominerals has accumulated largely from solid-state NMR studies.[37,45,46,50−56] The chemical shifts observed in MAS spectroscopy describe the local
chemical (electronic) environment—representing local sites,
in amorphous and crystalline polymorphs alike. Thus, CP MAS provides
a convenient method for following evolution from the precursor into
final polymorphic forms, detecting both phase separation and transformation—and
has been previously demonstrated to illuminate critical mechanistic
details of the relevant biomimetic pathways.[44,48,57,58] The CP MAS
combines sensitivity to the local electronic structure with spatial
selectivity guaranteeing that what is observed arises from only the
vicinity of the included organic matter. In what follows we will present
both CP MAS studies of our occluded Asp molecules as well as experiments,
including REDOR NMR, which exploit other more specific dipolar interactions.[59−61]Our model biomimetic system is formed when l-aspartic
acid (Asp) is added to a solution which precipitates calcium carbonate.
Absent any Asp, the most stable polymorph, calcite, precipitates.
At low Asp concentration, the initially precipitated vaterite spontaneously
transforms at room temperature to calcite, while at sufficiently high
Asp concentration the vaterite produced is both thermally and temporally
stable. We take advantage of CP and REDOR MAS NMR as local probes
to identify the chemical structure of the perturbed nearest group
of carbonates in both low and high Asp vaterite precipitates as well
as in the resulting calcite precipitate. We will refer to this group
as the interaction shell, or equivalently the occlusion unit. This
unit is pliant (i.e., amenable to small-scale rearrangements) yet
persistent (resistant to large-scale displacements of nearby species).
A statistical model of the concentration-dependent distribution of
these occlusion units helps clarify the source of vaterite’s
apparent concentration-dependent stability.
Experimental
Section
Materials
CaCl2, NaHCO3, [98% 13C] NaH13CO3, l-aspartic acid
(Asp), and [98% 15N]Asp were purchased from Sigma-Aldrich
and used without further purification.
Synthesis of Vaterite Coprecipitated
with Amino Acid
There are two general approaches to the incorporation
of amino acids
as occlusions in calcium carbonate: one referred to as the “fast
precipitation” method, and the second as the “slow”
or “diffusive” procedure as described in ref (30). In this work our samples
were prepared by the former approach, where solutions of Ca2+ and Asp are mixed with solutions containing carbonate and Asp. Two
such samples were prepared, differing only in the [Asp]. In each,
the calcium-containing solution was prepared as 100 mL of 50 mM CaCl2·2H2O and 3.5 (0.35) mg/mL of Asp (either
26 or 2.6 mM). The second solution consisted of 100 mL of 50 mM NaHCO3 and 3.5 (0.35) mg/mL of Asp. Both solutions were equilibrated
by addition of NaOH and/or HCl to a pH of 7. The solution of CaCl2/Asp was added to the NaHCO3/Asp via a syringe
pump at a rate of 1.5 mL/min with continuous stirring over a ∼1
h period. As the solubility of CaCO3 is only 0.15 mM, solid
is deposited continuously until the solution in the syringe pump is
exhausted. The resulting precipitate was filtered and air-dried at
room temperature. 13C- and 15N-enriched samples
were synthesized using the same procedure with [10% 13C]NaHCO3 and [98% 15N]Asp.[30]The pKa’s of the ionizable
protons in Asp are 1.9 (α-carboxyl), 9.6 (ammonium group), and
3.7 (side chain acid).[62] At the pH range
described above where the solution should be either close to neutral
or slightly basic after the addition of carbonate, Asp is primarily
found as the singly charged anionic species, with both carboxylic
acids deprotonated and negatively charged while the amine is protonated
and positively charged.
Amino Acid Analysis
The amounts
of the amino acids
incorporated into the vaterite and calcite polymorphs during precipitation
were measured at Aminolab, Rehovot Israel. For that, samples of our
CaCO3 crystal powders containing amino acids were completely
dissolved in 0.1 M HCl and subjected to analysis. The amounts were
quantified against standard solutions of l-Asp.
Solid-State
NMR
13C and/or 15N NMR measurements
were carried out on two solid-state NMR spectrometers:
300 and 500 MHz AVANCE III (Bruker) spectrometers using a 4 mm triple-resonance
MAS NMR probe with zirconia rotors. Samples were routinely spun at
5000 ± 2 Hz. Cross-polarization (CP) magic angle spinning (MAS)
echo experiments (indirect excitation) were carried out with a 5.0
μs π/2, 10.0 μs π pulse widths, and an echo
interval τ (200 μs) identical to the rotor period TR. During periods of 1H decoupling,
the rf field strength was 100 kHz. For CP via the Hartmann–Hahn
matching condition, rf levels of the X-channel (13C, 15N) were set at 50 kHz while the rf level of the 1H channel was ramped between 30 and 70 kHz, with contact times (ct’s)
of 1–2 ms. Experiments were repeated using relaxation delays
of 3 or 4 s. Up to 30k transients were acquired. For these relatively
short CP intervals, the transfer of magnetization is unlikely to be
efficient beyond 0.5 nm; where somewhat longer range interactions
were of interest, 8 ms (13C–1H) contact
time was used.Direct excitation (DE) 13C and 15N echo experiments were executed with 5.0 μs π/2
pulse widths, 10.0 μs π pulse widths, and an echo interval
τ equal to the rotor period TR (200
μs). The 1H decoupling field was 100 kHz. For quantitative
DE 13C experiments, we waited 2400 s between repeats of
the experiment (closely to fully relaxed); 10 s relaxation delays
were found adequate to obtain quantitative DE 15N spectra.1H–13C 2D-HETCOR[63,64] experiments employed the wPMLG5[65] homonuclear
decoupling scheme during t1 (1H chemical shift evolution period), followed by CP with 2 ms contact
time used to transfer magnetization from 1H sites to 13C and 15N where chemical shift information could
be accumulated in t2. The relaxation delay
was 4 s. We accumulated 32–48 separate t1 increments and acquired 3072 data points in the directly
sampled t2 dimension. Before applying
the 2D FT algorithm, the data set was zero filled in both dimensions
to 1024 and 4096 points, respectively.Spectral sensitivity
is enhanced where we isotopically enrich the
carbonate source to 10% in 13C. At this labeling level,
the 13C signal is 10-fold enhanced as compared to natural
abundance—and yet at this enrichment level experiments can
be analyzed on the assumption that dipole–dipole couplings
between nearby 13C nuclei are weak and cannot significantly
complicate the interpretation. Depending on the details of the experiment,
the 13C spectrum either reflects contributions from all
carbon sites found in the sample (DE NMR), or in the CP experiment
from only the region near to the amino acid (CP NMR) as magnetization
is sourced from 1H sites, found exclusively in the organic
matter (and possibly water molecules). Enrichment of the amine group
99.8%[15N] of Asp enhances the spectral sensitivity sufficiently
so that it is possible to directly observe the amine (15N) of the amino acid and provides a tool for studying exclusively
the mineral carbonates with the occluded amine group in Asp—as
the 13C–15N REDOR experiment yield signals
only where 13C sites are in intimate contact with 15N.13C{15N} and 15N{13C} REDOR experiments[60] (13C{15N} indicates that 13C was observed
while the dipole
coupling to 15N was activated) were conducted using refocusing
π pulses applied to each rotor period (TR) on the observe channel, and dephasing π pulses in
the middle of each rotor period on the nonobserved nuclei. This sequence
was followed by two additional rotor periods with a chemical shift
echo π pulse in the middle. REDOR π pulses employed xy8
phase cycling[66] for the refocusing and
recoupling pulses. Data acquisition employed an alternating block
scheme, collecting a single S0 transient
with recoupling pulses turned off, followed by collection of an SR transient where the recoupling pulses are
turned on. REDOR difference data were obtained by subtracting the SR signal from the S0 signal so as to create the REDOR difference signal ΔS = S0 – SR representing only the chemical shifts of species where the observed
nucleus is “close to” (typically <0.5 nm) partner
nuclear spin, i.e., only where a 13C spin is sufficiently
close to an 15N nuclear spin. While CPMAS provides a picture
of some sort of average electronic structure over a nanometer range,
as reflected in the chemical shifts of the observed nuclear spins,
REDOR spectroscopy provides a window into local structure in that
it looks at the distance, or distribution of distances, between spins
which are quite close (<0.5 nm). As such the CP is employed to
light up carbonates that are in intimate contact with the amino acid,
while the CP-REDOR will serve to select distinct subsets within those
carbonates.
Results
Polymorph Selection and
Stability Control
That influence
of the l-aspartic amino acid in the aqueous precipitation
solution is unmistakable: calcite precipitates absent any Asp, while
in its presence vaterite—the least stable CaCO3 polymorph—precipitates.
The two polymorphs are easily distinguished in the 13C
DE MAS NMR spectra, with calcite showing a single characteristic peak
and vaterite two peaks of unequal intensity (Figure a,c)[67−69] representing quantitatively all
carbon environments found in the precipitates. While multiple studies
have shown that acidic amino acids can influence the initial selection
of vaterite,[70,71] we additionally find here that
vaterite deposited from low-concentration Asp solution (2.6 mM; denoted
low-[Asp]) is metastable and evolves over the course of 5 days at
room temperature so as to yield calcite (Figure b,c). Samples grown in 10-fold more concentrated
Asp solution (high-[Asp]) are both temporally (years) and thermally
(up to 200 °C) stable. Thus, while Asp is essential in the initial
seeding of the vaterite polymorph, once occluded in the vaterite lattice
(vide infra) it is also implicated in lattice stability.
Figure 1
75.4 MHz 13C DE MAS (a–c) and CP MAS (d–f)
spectra, carbonate region, of the transient [10%-13C]CaCO3 low-[Asp] coprecipitate as a function of time. Crystalline
bulk phases: (a) as-synthesized vaterite, (b) after 1 day, intermediate
state of partial conversion shows both vaterite and calcite, (c) after
5 days, final state with only calcite (low-[Asp]). Interfacial carbonates
and how they evolve in concert with the bulk phase transformation
are shown in parallel (d–f) by the CP MAS spectra. Contributions
of the line-shapes of the interfacial carbonates (CP) are not visible
in the quantitative DE spectra, therefore indicating that the interfacial
carbonates are a small fraction of the total. A vertical line is drawn
on the CP spectra to emphasize the spectral changes. The broad ∼164
ppm peak is attributed to coprecipitated NaHCO3[46,72] whose varying CP dynamics possibly impedes its detection within
the calcite host (f). A vertical line is drawn on the CP spectra to
emphasize the spectral changes. (g, h) Representative SEM images of
the low-[Asp] vaterite and calcite coprecipitates; white scale bars
represent 400 nm.
75.4 MHz 13C DE MAS (a–c) and CP MAS (d–f)
spectra, carbonate region, of the transient [10%-13C]CaCO3 low-[Asp] coprecipitate as a function of time. Crystalline
bulk phases: (a) as-synthesized vaterite, (b) after 1 day, intermediate
state of partial conversion shows both vaterite and calcite, (c) after
5 days, final state with only calcite (low-[Asp]). Interfacial carbonates
and how they evolve in concert with the bulk phase transformation
are shown in parallel (d–f) by the CP MAS spectra. Contributions
of the line-shapes of the interfacial carbonates (CP) are not visible
in the quantitative DE spectra, therefore indicating that the interfacial
carbonates are a small fraction of the total. A vertical line is drawn
on the CP spectra to emphasize the spectral changes. The broad ∼164
ppm peak is attributed to coprecipitated NaHCO3[46,72] whose varying CP dynamics possibly impedes its detection within
the calcite host (f). A vertical line is drawn on the CP spectra to
emphasize the spectral changes. (g, h) Representative SEM images of
the low-[Asp] vaterite and calcite coprecipitates; white scale bars
represent 400 nm.The two initial vaterite
precipitates, metastable and stable, appear
indistinguishable both spectroscopically by 13C DE MAS
(SI, Figure S1) and morphologically (Figure g,h; and SI, Figure S2). In both we find ∼150 nm nanospheres
which aggregate and partially coalesce in ∼2 μm particles.
In contrast, significant morphological changes are observed after
conversion of low-[Asp] vaterite to calcite, where the ∼2 μm
particles display rectangular faceted edges; the high magnification
clearly shows (Figure h) that the nanogranular pattern is retained. While nanogranularity
is commonly observed for vaterite lattices,[73] when found on calcite facets it is often taken as evidence for nonclassical
ion-by-ion crystallization pathways—as is the case here.[74] Polymorph identity is corroborated by the X-ray
powder diffraction data shown in the SI, Figure S3.
Asp Incorporation Level vs Solution Concentration
A
key question is that of the actual incorporation levels found in the
carbonate lattice grown from 15N-enriched Asp solutions.
Quantitative 15N DE MAS NMR spectra (Figure S4a) suggest that the high-[Asp] sample contains double
the Asp level as the low-[Asp] precipitate. This observation is further
substantiated by the amino acid analyses of our precipitates (Experimental Section) showing Asp levels of ∼1.2
and 0.5 mol %, respectively. Despite having a growth solution 10-fold
more concentrated than was the low-[Asp] solution, the corresponding
incorporation level is only ∼2-fold higher in the high-[Asp]
sample. The decrease in incorporation efficiency at higher amino acid
concentration is consistent with what has previously been reported
for samples prepared by the diffusive method where it was observed
that increasing Asp concentration in the precipitation solution not
only led to decreased incorporation efficiency but also reduced absolute
levels of incorporation.[18] That at higher
Asp concentration the incorporation is diminished represents anticooperativity
between Asp molecules in close proximity to one another. Thus, the
dramatic stabilization demonstrated for the high-[Asp] vaterite may
be attributed to the 2-fold increase of Asp concentrations in the
solid-state lattices. The implications of this observation will be
addressed below.
Exploring the Asp–Carbonate Interaction
Interface
We selectively access the interfacial region where
carbonates are
in proximity to the amino acids via 13C CP MAS NMR[75−78] where the detected 13C magnetization is transferred from
nearby hydrogen (1H) sites. Magnetization transfer during
the cross-polarization period falls off rapidly with increasing 1H···13C distance, and thus, the
CP MAS spectra of the coprecipitates (Figure d–f) represent exclusively the fraction
of carbonates that are sufficiently close (≤1 nm) to hydrogen
atoms–which are found only in the amino acids and/or water
molecules. These CP-exposed carbonate sites differ significantly from those of the bulk crystalline carbonates (DE MAS spectra Figure a–c) both
in chemical shift—which represents local chemical environments—and
in line-widths, whose increase represents the increase in heterogeneity,
and therefore disorder, in the local environment.In 13C CP MAS NMR, we observe the doubling of the intensity of the 13C peak representing the interfacial carbonates (SI, Figure S5) in the high-[Asp] vs the low-[Asp]
precipitates. Doubling the number of interfacial carbonates upon doubling
Asp concentration within the vaterite precipitates suggests that the
Asp molecules are sparsely distributed at both concentrations and
have intimate contact with similar numbers of carbonates per Asp,
as were the Asp to aggregate or clump in phase-separated crystals,
the increase in surface area, and thus CP-able carbonates intimate
with the amino acid surface, would grow less rapidly than the increase
in amino acid signal.
Asp–Carbonate Connectivities across
the Interaction Interface
1H–13C 2D HETCOR experiments (Figure c) show for both
low- and high-[Asp] vaterite and low-[Asp] calcite coprecipitates
that there are broad cross-peaks of similar intensity between the
interfacial carbonates to the hydrogen species of Asp–CH, CH2, and the charged −NH3+–
and of water molecules. These cross-peaks suggest that all hydrogen-containing
amino acid environments are exposed to the inorganic matrix in the
vaterite hosts and remain so in calcite following the spontaneous
transformation. These observations are consistent with molecularly
dispersed Asp that is occluded within the inorganic matrices, both
before and after any bulk rearrangement.
Figure 2
75.4 MHz 13C CPMAS NMR spectra of (a) unlabeled high-[Asp]
vaterite coprecipitate (black trace) and its 5-fold vertical expansion
(blue trace) exposing the 13C peaks of the occluded amino
acid; (b) neat l-Aps (crystalline form). The chemical shifts
of the carboxylic groups of neat l-Asp and of occluded Asp
represent protonated and deprotonated (negatively charged) species,
respectively, as is noted by the red and blue dashed lines. The asterisk
denotes spinning sidebands. (c) 300 MHz 2D 1H–13C PMLG5[65] HETCOR[63,64] spectra of the high- and low-[Asp] vaterite and the evolved low-[Asp]
calcite coprecipitates. The cross-peaks show connectivities arising
from 1H···13C distances of up
to 5 Å between hydrogen species and the host matrix carbonates.
The 13C dimension (projections) shows two distinct types
of interfacial carbonates of the vaterite and calcite coprecipitates
as identified below in the REDOR experiments (Table ). The 1H-dimension resolves the
main groups of hydrogens: the CαH and CβH2, charged amine, water, and bicarbonates. The low-[Asp]
vaterite and calcite coprecipitates show also the bicarbonate cross-peak
of residual NaHCO3.[72]
75.4 MHz 13C CPMAS NMR spectra of (a) unlabeled high-[Asp]
vaterite coprecipitate (black trace) and its 5-fold vertical expansion
(blue trace) exposing the 13C peaks of the occluded amino
acid; (b) neat l-Aps (crystalline form). The chemical shifts
of the carboxylic groups of neat l-Asp and of occluded Asp
represent protonated and deprotonated (negatively charged) species,
respectively, as is noted by the red and blue dashed lines. The asterisk
denotes spinning sidebands. (c) 300 MHz 2D 1H–13C PMLG5[65] HETCOR[63,64] spectra of the high- and low-[Asp] vaterite and the evolved low-[Asp]
calcite coprecipitates. The cross-peaks show connectivities arising
from 1H···13C distances of up
to 5 Å between hydrogen species and the host matrix carbonates.
The 13C dimension (projections) shows two distinct types
of interfacial carbonates of the vaterite and calcite coprecipitates
as identified below in the REDOR experiments (Table ). The 1H-dimension resolves the
main groups of hydrogens: the CαH and CβH2, charged amine, water, and bicarbonates. The low-[Asp]
vaterite and calcite coprecipitates show also the bicarbonate cross-peak
of residual NaHCO3.[72]
Table 1
Deconvolution of the Two Classes of
Interfacial Carbonate Populations (Figure c,d)
DV
DVA
vaterite
DC
DCA
calcite
δisoa (ppm)
169.4
168.8
170.6, 169.5
168.6
167.4
168.6
δνb (ppm)
1.8
2.7
0.4, 0.6
1.2
1.5
0.2
populationsb
0.5
0.5
0.5
0.5
Isotropic chemical shifts of the
DVA and DCA carbonate peaks were determined
directly from the ΔS peak positions of the
low-[Asp] vaterite and low-[Asp] calcite samples (Figure a,b), respectively.
These chemical shifts and line-widths served to deconvolute the S0 REDOR spectra to yield the respective peak
positions and line-widths of the DV and DC carbonate peaks. The two
sets of REDOR-extracted peak positions and line-widths served to deconvolute
the CP MAS spectra (Figure ) from which the relative populations were estimated assuming
similar CP dynamics. Chemical shifts and line-widths of the crystalline
polymorphs—vaterite and calcite—were determined from
the DE MAS spectra and are given for a reference (consistent with
literature values). The accuracy of the determined isotropic chemical
shifts (δiso) and line-widths (δν) is
±0.1 for DV, DC, and DCA and ±0.2 for DVA.
Populations accuracy
is estimated
at ±0.1.
The small water–carbonate cross-peaks in
the 2D-HETCOR (Figure c) spectra of the
high-[Asp] vaterite and the low-[Asp] vaterite and calcite precipitates
clearly indicate the co-occlusion of water molecules that survive
also the vaterite-to-calcite transformation. Any water contributing
to the CP (cross-)peak must reflect molecules of limited mobility,
similar to the structural water found in ACCs.[43,48,52] These weak water–carbonate cross-peaks
further indicate that water molecules contribute only a small fraction,
∼10%, to the total intensity in the carbonates peak (Figure d–f); the
similar relative peak intensities of water vs Asphydrogen species
(1H projections; Figure b) suggest a similar Asp:water ratio throughout the
composites.Complementary information regarding the occluded
Asp is obtained
by comparing its 13C CP MAS spectral signatures when occluded
in the carbonate lattice vs that as neat amino acid (Figure ). Asp carboxylic groups report
∼4 ppm downfield shift relative to the neat acid, indicating
that they are found as deprotonated anions.[62] This, combined with the HETCOR spectra (Figure c), identifies the occluded amino acid as
the Asp1– anion—where both carboxylates are
deprotonated, and the amine is protonated. The chemical shifts of
Cα and Cβ are similar to those in
neat Asp, yet all four peaks are much broader—which is similar
to that observed for the amine group via their 15N spectra
(SI, Figure S4a), all reporting structural
heterogeneity at the amino acid which, of course, is intimately connected
to that observed for the surrounding carbonates and is consistent
with kinetically controlled incorporation.What have we observed?
The 13C DE and CP excitation
schemes differentiate between two types of carbonates. The DE spectra
show the bulk portions of our mesocrystals representing regions of
either vaterite or calcite largely unperturbed by Asp, and where the
vast majority of 13C nuclei are in uniform crystalline
environments. The CP spectra show the much smaller fraction of interfacial
carbonates that, along with the occluded Asp, are structurally disordered
(Figure d,f). The
CP MAS signal observed from a calcite sample prepared by the precipitation
protocol described, except that no amino acids were added (SI, Figure S6), is significantly weaker. This demonstrates
that the majority of the CP MAS peak in our carbonate/Asp samples
reflects only those carbonates found within the CP-able “sphere
of influence” of the amino acids and their associated water
molecules.[76]The change in the spectral
line-shape of the carbonate CP MAS peaks
(Figure d–f)
as the bulk vaterite-to-calcite transformation occurs (Figure a–c) indicates that
the interaction interface with Asp rearranges. The simultaneous evolution
of the 15N amino acidamine DE MAS spectra of the low-[Asp]
vaterite coprecipitate and the resulting low-[Asp] calcite (SI, Figure S4b) indicates that the same rearrangement
simultaneously impacts both the amino acid and the interfacial carbonates.
In the rest of this paper we refine the implications of this observation
so as to propose a molecular-functional portrayal of this model system.
Interaction Shell Composition: Two Functionalities of Interfacial
Carbonates
A more selective, short-distance technique (<5
Å) is the CP-REDOR technique which identifies and probes’
pairwise interactions—and in opportune cases quantifies distances
between rare spins.[60] Herein, the REDOR
measurements rely on the specific dipole–dipole interaction
between a single 13C (of the 10% labeled carbonates) and 15N (of the 100% labeled amines), at distances limited to no
more than 5 Å. Using REDOR we access three different pieces of
information. First, we distinguish between interfacial carbonates
based on whether they are “close by” or “far
from” the Asp amine groups (−15NH3+). Second, we determine the average 13C···15N distance between an amine
and the “close-by” carbonates. Finally, we estimate
the association number—the number of “close-by”
carbonates proximate to one amine—and infer the number of remaining
“farther-from” amine carbonates in the interaction shell.The 13C{15N} CP-REDOR NMR experiment (Figure ) is run as two parallel
experiments, yielding one 13C spectrum that represents
all CP-able carbon species, S0, and a
second where dipolar interactions lower the intensity of 13C carbonates close to 15N-amine, SR. The SR spectrum represents the
more distant carbonates (≥5 Å), while the REDOR difference
spectrum ΔS = S0 – SR selects for only those 13C sites close to a nitrogen15N spin (≤5
Å).
Figure 3
75.4 MHz 13C{15N} CP-REDOR spectra of the
transient as-synthesized low-[Asp] vaterite polymorph (a), and 5 days
later (top) after phase transformation to calcite is nearly complete
(b). The S0 spectra (black traces, left)
represent all carbonates that are proximate to hydrogenated species
(Asp and water molecules), namely, the interaction shell carbonates.
The different chemical shifts of the SR and ΔS carbonate peaks (orange and blue)
demonstrate that in each host matrix there are two distinct groups
of carbonates. The ΔS peaks represent the “close-by”
carbonates (black pseudotriangles in part e), whose distance to the
amine (measured from the 13C to 15N) is shorter of 5 Å; the SR peaks represent the remaining interfacial carbonates,
the red pseudotriangles, “farther-from” the amine, yet
within the CP-able region. Based on the observed selectivity the S0 CP-REDOR spectra were deconvoluted (DMFIT[79]) to two carbonate groups (c, d) whose chemical
shifts and line-widths are listed in Table . CP-REDOR employed dipolar evolution of 12.8 ms (64 TR). (e) Schematic structural illustration of
the arrangement of interfacial carbonates (pseudotriangles representing
the 3 oxygen atoms and the carbon atoms found at their center) surrounding
an occluded Asp molecule within the calcite host. Dark pseudotriangles
represent DCA’s “close-by” the positively
charged amine with an average 3.8 Å distance (13C{15N} REDOR); red represents DCs farther from the amine. There
are 3–4 DCA’s directly associated with each
amine (15N{13C} REDOR) and likewise 3–4
DCs (deconvolution pf the CP MAS spectra in Figure ) associated with the other moieties (two
positively charged carboxylates, methylene and methine) via interactions
mediated by calcium ions and water molecules (2D-HETCOR).
75.4 MHz 13C{15N} CP-REDOR spectra of the
transient as-synthesized low-[Asp] vaterite polymorph (a), and 5 days
later (top) after phase transformation to calcite is nearly complete
(b). The S0 spectra (black traces, left)
represent all carbonates that are proximate to hydrogenated species
(Asp and water molecules), namely, the interaction shell carbonates.
The different chemical shifts of the SR and ΔS carbonate peaks (orange and blue)
demonstrate that in each host matrix there are two distinct groups
of carbonates. The ΔS peaks represent the “close-by”
carbonates (black pseudotriangles in part e), whose distance to the
amine (measured from the 13C to 15N) is shorter of 5 Å; the SR peaks represent the remaining interfacial carbonates,
the red pseudotriangles, “farther-from” the amine, yet
within the CP-able region. Based on the observed selectivity the S0 CP-REDOR spectra were deconvoluted (DMFIT[79]) to two carbonate groups (c, d) whose chemical
shifts and line-widths are listed in Table . CP-REDOR employed dipolar evolution of 12.8 ms (64 TR). (e) Schematic structural illustration of
the arrangement of interfacial carbonates (pseudotriangles representing
the 3 oxygen atoms and the carbon atoms found at their center) surrounding
an occluded Asp molecule within the calcite host. Dark pseudotriangles
represent DCA’s “close-by” the positively
charged amine with an average 3.8 Å distance (13C{15N} REDOR); red represents DCs farther from the amine. There
are 3–4 DCA’s directly associated with each
amine (15N{13C} REDOR) and likewise 3–4
DCs (deconvolution pf the CP MAS spectra in Figure ) associated with the other moieties (two
positively charged carboxylates, methylene and methine) via interactions
mediated by calcium ions and water molecules (2D-HETCOR).The ΔS peaks of the low-[Asp] vaterite
precipitate,
and of the very same sample after 5 days as it has evolved to low-[Asp]
calcite (Figure a,b,
blue traces), appear at specific chemical shifts corresponding to
distinct subsets of the interfacial carbonates. Thus, there are at
least two classes of interfacial carbonates that differ both in their
chemical shifts and in their proximity to the aminenitrogen. This
selectivity in the REDOR spectra allows us to deconvolve the S0 peaks (Figure c,d) providing the chemical shifts and line-widths
of the two classes of 13C sites in the interfacial region,
either “close-by” or “farther-from” the
amine, which we denote DV, DVA, DC, and DCA,
as listed in Table . DV and DC stand for Disordered Vaterite and Disordered Calcite, and the A subscript stands for “close-by”
the amine (vide infra). In summary, CO32–’s which are relatively near to 15N amine sites appear in the ΔS spectrum shifted
to lower chemical shifts while carbonates farther from 15N preferentially appear in the SR spectrum
at the high ppm region. As all carbonates are within the CP-able sphere
we infer that those farther from the amine must be closer to the methylene
and methinehydrogens and to water molecules as illustrated schematically
in Figure e.Isotropic chemical shifts of the
DVA and DCA carbonate peaks were determined
directly from the ΔS peak positions of the
low-[Asp] vaterite and low-[Asp] calcite samples (Figure a,b), respectively.
These chemical shifts and line-widths served to deconvolute the S0 REDOR spectra to yield the respective peak
positions and line-widths of the DV and DC carbonate peaks. The two
sets of REDOR-extracted peak positions and line-widths served to deconvolute
the CP MAS spectra (Figure ) from which the relative populations were estimated assuming
similar CP dynamics. Chemical shifts and line-widths of the crystalline
polymorphs—vaterite and calcite—were determined from
the DE MAS spectra and are given for a reference (consistent with
literature values). The accuracy of the determined isotropic chemical
shifts (δiso) and line-widths (δν) is
±0.1 for DV, DC, and DCA and ±0.2 for DVA.Populations accuracy
is estimated
at ±0.1.The chemical
shifts identified in Table for the DV and DC carbonates are, reassuringly,
centered about the chemical shifts of their host lattices, indicating
that the near-range chemical environment is essentially that of the
host bulk lattice, minimally perturbed by carbonate substitution by
a carboxylate in the Ca2+ coordination shell—yet
the observed range of chemical shift as measured by the line-width
of these peaks is larger, representing structural heterogeneity about
the average environment of the host. Accordingly, we have denoted
these peaks as disordered vaterite, DV, and disordered calcite, DC.[46,52] In contrast,
chemical shifts of the peaks we label as DVA and DCA, where subscript A denotes their proximity to the amine of
the occluded amino acid, are found at a substantial shift from that
of the host carbonate, consistent with an electronic environment that
is more perturbed by Ca2+ substitution by −NH3+.The carbonate peaks of
both vaterite precipitates—the as-synthesized,
transient low-[Asp] and the stable high-[Asp]—are indistinguishable
in the CP MAS spectra (SI, Figure S5) and
likewise indistinguishable in the 13C{15N} CP-REDOR
spectra (Figure S7, ΔS peaks shown). The former illustrates that the chemical environments
(reflected by 13C chemical shifts) of the interfacial carbonates
are independent of Asp concentration, and the latter—as we
discuss in more detail below—that the 13C···15N average distances are similarly concentration-independent.
Average NH3+···CO32– Distances of DVA and DCA Carbonates
Applying the REDOR experiment
with increasing dipolar interaction time leads to a buildup curve
representing ΔS/S0 (see Figure ) vs t, from which the dipolar interaction strength and the distance
between the nuclei of interest, rC···N, are calculated. For each of the three coprecipitates we find that rC···N = 3.8 Å provides the
best fit to the average distance between either the 13C
in the DVA or DCA carbonates and the 15N in the amine. As disorder is inherent, both at the DVA and DCA carbonates and the occluded Asp, the “single”
REDOR-determined distance must be understood to represent at best
an average over some distribution. Note that said average rC···N value is the same for all
three calcium carbonate samples: high- and low-[Asp] vaterites, and
the calcite which evolves from the latter. The persistence of this
average distance regardless of Asp occlusion level, and, moreover,
before and after the spontaneous transformation from vaterite to calcite,
further testifies to the stability of the interaction shell. Given
the typical formula unit dimension of about 4 Å, the CP-REDOR
experiment would appear to identify only nearest-neighbor carbonates
to the −15NH3+.
Figure 4
75.4 MHz 13C{15N} CP-REDOR ΔS/S0 evolution as a function
of dipolar evolution time for the three coprecipitates: high-[Asp]
vaterite, low-[Asp] vaterite, and the fully evolved low-[Asp] calcite
(respective δiso(13C) values for the three
curves are as listed in Table : 168.8, 168.8, and 167.4 ppm). The vertical error bars represent
uncertainties arising from the spectral deconvolutions of the DVA and DCA components in their respective S0 spectra (at the three time points). The central
line (blue) represents the best fit REDOR evolution for rC···N = 3.8 Å. The other two lines
represent calculated REDOR evolution for isolated spin pairs with
internuclear distances of ±0.5 Å. Simulations were performed
using Spinevolution.[80]
75.4 MHz 13C{15N} CP-REDOR ΔS/S0 evolution as a function
of dipolar evolution time for the three coprecipitates: high-[Asp]
vaterite, low-[Asp] vaterite, and the fully evolved low-[Asp] calcite
(respective δiso(13C) values for the three
curves are as listed in Table : 168.8, 168.8, and 167.4 ppm). The vertical error bars represent
uncertainties arising from the spectral deconvolutions of the DVA and DCA components in their respective S0 spectra (at the three time points). The central
line (blue) represents the best fit REDOR evolution for rC···N = 3.8 Å. The other two lines
represent calculated REDOR evolution for isolated spin pairs with
internuclear distances of ±0.5 Å. Simulations were performed
using Spinevolution.[80]
3–4 DVA or DCA Carbonates Are Associated
with Each Asp Amine
As the amino acids are dispersed individually,
in the 13C{15N} CP-REDOR experiment described
above, each DVA or DCA carbonate has exactly
one single nearby 15N neighbor. Repeating the CP-REDOR
experiment where we instead detect the 15N signature of
the labeled amino acid (Figure ), we anticipate that only the same distance distribution
can be found—though there are multiple nearby carbonates (DVA or DCA). Thus, the signal may be attenuated by
different numbers of nearby 13C-labeled carbonates. Where
the carbonates are 13C-labeled to only 10%, a single nearby
carbonate would attenuate the 15N peak intensity by no
more than 10%, and where there are n nearby carbonates,
the maximal cumulative signal attenuation may reach n × 10%. Hence, the 15N REDOR peak attenuation determines
the minimal number of C sites within the REDOR distance
limits of the 15N-amine—i.e., n is an estimate of the association number of carbonates near each
amine.
Figure 5
50.2 MHz 15N{13C} CP-REDOR of (a) stable
high-[Asp] vaterite, (b) the partially transformed low-[Asp] vaterite,
and (c) the fully transformed high-[Asp] calcite. The S0 spectra (black traces) represent all [15N]l-Asp amines. The similarity of the (integrated) relative intensity
of the REDOR ΔS peaks (red traces), with ΔS/S0 ∼0.20–0.25,
demonstrates that each amine is associated with at least 3 interfacial
carbonates (Table S1). Dipolar evolution
of 12.8 ms (64 TR) was employed.
50.2 MHz 15N{13C} CP-REDOR of (a) stable
high-[Asp] vaterite, (b) the partially transformed low-[Asp] vaterite,
and (c) the fully transformed high-[Asp] calcite. The S0 spectra (black traces) represent all [15N]l-Asp amines. The similarity of the (integrated) relative intensity
of the REDOR ΔS peaks (red traces), with ΔS/S0 ∼0.20–0.25,
demonstrates that each amine is associated with at least 3 interfacial
carbonates (Table S1). Dipolar evolution
of 12.8 ms (64 TR) was employed.This effect is best represented by the REDOR difference
peak, ΔS, in Figure , and quantified by ΔS/S0. We find ΔS/S0 ≥ 20% in the 15N{13C} CP-REDOR
spectra of each of the three coprecipitates—high-[Asp] vaterite
and low-[Asp] vaterite–calcite intermediate and final low-[Asp]
calcite, at a fixed REDOR evolution time (12.8 ms dipolar recoupling,
64 TR) indicating that the association
number is greater than 2. We can further refine this estimate as we
know that, for our measured average distance of rC···N ∼ 3.8 Å (found above
in the 13C{15N} CP-REDOR experiment), the 15N signal attenuation, ΔS/S0, at 12.8 ms is 0.46 ± 0.03 (Figure ). Correcting for this partial attenuation
of the 15N REDOR peak [see the SI, Table S1] we find that n, the association
number, is 3–4. Thus, 3–4 carbonates are associated
with each 15N amine at an average distance of 3.8 Å.The broad line-widths of the amine peak (S0) in the 15N CP-REDOR spectra (Figure ) clearly reveal heterogeneity;
this heterogeneity is similar to that exhibited in the 15N DE MAS spectra (SI, Figure S4). Nonetheless
the ΔS peak is not simply an attenuated version
of the S0 spectrum, as is seen most clearly
for the vaterite precipitates: at higher 15N chemical shifts
in the vaterite, the attenuation is larger—suggesting that
these shifts are likely more closely associated with 13C carbonates than are found at lower nitrogen shifts. This observation
further substantiates the above suggested distance distribution with rC···N representing an average
distance. The 15N peak of the spontaneously evolved calcite
coprecipitate narrows (Figure S4a, Figure ), and the ΔS and S0 peak line-shapes become
similar (Figure c),
indicating decreased heterogeneity and therefore narrower distributions
of both the association number and rC···N within the calcite host. These observations imply that the vaterite-to-calcite
transformation is accompanied by a small structural rearrangement
of the interaction interface which decreases local heterogeneity,
while maintaining the same average distance and association number
as found within the vaterite host.To reiterate, in all three
samples we find the same average association
number and amine to carbonates distance, thus suggesting that locally
the structure of the amino acid–carbonate interaction region
is independent of both concentration of Asp and the host crystal lattice.
The interaction interface containing the amino acid undergoes small
rearrangements as the bulk lattice transforms between vaterite and
calcite.
Asp Is Molecularly Occluded within an Interaction Shell of Less
than Ten Perturbed Carbonates
The number of carbonates within
the CP-able volume surrounding an individually occluded Asp molecule
is obtained by reference to the deconvoluted CP spectra (Figure ) where the two sets
of interfacial carbonate components, DVA vs DV (or DCA vs DC), are comparable in the low- and high-[Asp] samples
(Table ). As the REDOR
analysis above counts 3–4 DVA or DCA carbonates
(15N{13C} REDOR), this implies that there are
also 3–4 DV or DC carbonates. Hence, the CP-able volume (at
1–2 ms contact time) consists of about 6–8 interfacial
carbonates.
Water Molecules Segregate to the DC/DV Subregion
of the Interface
As the water–carbonate cross-peaks
(2D HETCOR spectra, Figure c) are centered on
the interfacial carbonates remote from the amine, DV and DC, we conclude
that the co-occluded water resides preferentially in their vicinity
and not within the tightly amine-associated region of the DVA’s or DCA’s. This evidence suggests that
occluded Asp selectively segregates coadsorbed water molecules into
this subregion of the interface, and once there they become an integral
part thereof.
How Far from Occluded Asp Is the “Bulk”
Lattice
Regained?
The above CP MAS experiments (1–2 ms) probe
primarily nearest neighbors of Asp in the vaterite and calcite hosts.
At longer CP times (8 ms), contributions from more distant carbonates
are evident as the resulting spectral line-shapes differ (Figure ). These new peaks
are best visualized by subtraction of the short CP spectrum (2 ms)
from the long CP as shown by the Δ(CP) spectra in Figure . The exposed difference peaks
are more nearly those of the bulk lattice, suggesting that the majority
of the lattice disruption associated with the occluded Asp is relaxed
within the nearest layer of 8 surrounding carbonates at distances
less than 1 nm from Asp.
Figure 6
75.4 MHz 13C CP MAS spectra of the
(a) stable high-[Asp]
vaterite and the (b) low-[Asp] calcite. The red and black spectra
were obtained with 2 and 8 ms cross-polarization times (contact times),
respectively. The blue traces represent weighted subtraction of the
2 ms spectra from the respective 8 ms spectra, emphasizing the appearance
of host lattice carbonate peaks at the unperturbed chemical shifts
(dashed lines); top, vaterite and calcite DE MAS reference spectra.
75.4 MHz 13C CP MAS spectra of the
(a) stable high-[Asp]
vaterite and the (b) low-[Asp] calcite. The red and black spectra
were obtained with 2 and 8 ms cross-polarization times (contact times),
respectively. The blue traces represent weighted subtraction of the
2 ms spectra from the respective 8 ms spectra, emphasizing the appearance
of host lattice carbonate peaks at the unperturbed chemical shifts
(dashed lines); top, vaterite and calcite DE MAS reference spectra.
Discussion
In either crystalline
or amorphous lattices, foreign agents may
be incorporated during growth, and where the growth is kinetically
controlled these additives or impurities appear on no predictable
length scale. While well-ordered periodic structures of sufficient
dimension can be studied via numerous characterization techniques,
with methodologies suitable to inherently disordered systems with
nanoscopic dimensions, the choices are rare. Nevertheless, a whole
multitude of terms are used throughout the scientific literature in
describing this phenomenon—inclusion, occlusion, incorporation—which
suggest a knowledge of structure which may at molecular dimensions
be elusive. Accompanying the multitude of terms are a comparable number
of questions, on topics as varied as the magnitude of disruption to
the surrounding matrix, the specific chemical interactions bridging
between the matrix and the occlusion, and the size of the region which
is only poorly described by reference to the bulk, as these hybrid
structures affect macroscopic properties well beyond our observation
of lattice stability with respect to bulk transformations. The solid-state
MAS NMR techniques described above are suited to address this array
of fundamental questions and to project on a variety of macroscopic
properties. In this final section we attempt to tie together all the
results in a structural model for the occlusion, and to suggest how
that model impacts macroscopic properties.
Structural Model of Asp
Occlusion Shell
We can now
portray the buried interface in our Asp–CaCO3 composite.
Solid-state NMR, as our main characterization tool, identifies the
polymorphs comprising the bulk, vaterite, and calcite in our system
and monitors transformations when they occur—though of course
many other techniques are equally sensitive. In contrast, solid-state
NMR is uniquely capable of directly and selectively observing the
inherent disorder in the interaction shell including both interfacial
carbonates and the occluded Asp. Moreover, our NMR data (CP and 2D
HETCOR) unambiguously identify the incorporated amino acid as dominated
by the Asp1– species—where each carboxylate
is deprotonated while the amine is protonated. CP-REDOR NMR further
partitions the interfacial carbonates into two groups based on their
proximity to the amine group of Asp: 3–4 carbonates are at
an average distance of ∼3.8 Å from the amine, and a similar
number of carbonates are distant from the amine, but still within
a short range of the other hydrogens of Asp. Long-range CP (<1
nm) demonstrates that the relaxation back to bulklike environments
occurs shortly beyond the nearest layer of carbonates.As the
number of interfacial carbonates doubles upon doubling the concentration
of occluded Asp (low- and high-[Asp]), and the number of carbonates
near each Asp remains fixed (6–8), we conclude that the Asp
molecules are sparsely distributed in intimate contact with similar
numbers of surrounding carbonates per Asp. Moreover, as low-[Asp]
vaterite spontaneously transforms to low-[Asp] calcite, the Asp molecules
remain occluded and maintain their surrounding carbonates with at
most minor rearrangement. An important implication of the above facts
is that the amino acids are occluded as individual molecules surrounded
by a disordered layer of carbonates where Asp–Asp contacts
are avoided.The 3–4 negatively charged carbonates, which
we have identified
above as being near, ∼3.8 Å, the positively charged amine,
we labeled as DVA and DCA. Are these coordination
numbers and distances reasonable? We take inspiration from ionic lattices,
and in particular from potassium carbonate whose monovalent cation
is similar in size to the ammonium cation (no structure exists for
ammonium carbonate which is unstable). In K2CO3 six carbonates coordinate the potassium cation with K···C
distances between 3.45 and 3.9 Å.[81] In our system, as a significant fraction of the volume surrounding
the amine is blocked by the covalent bonding network of the Asp molecule
we expect to find fewer associating carbonates, 3–4 nearest
neighbors, than are found in pure ionic salts, and the distances we
have found are appropriate for the similarly sized −NH3+ cation. Thus, our estimated association number
of 3–4 carbonates, and average distances less than 4 Å,
seems reasonable.The second carbonates group farther from the
charged amine we have
labeled as DV and DC, because their 13C chemical shifts
look similar to those of the bulk lattices. As these carbonates are
farther from the amine, they must be closer to the negatively charged
carboxylate anions. This provides an electrostatic barrier which can
only be resolved if there are Ca2+ ions which are available
to coordinate to both, which, of course, is consistent with the chemical
shifts of these carbonates looking to be more nearly bulklike—as
the nearest charge-balancing cation is identical in the bulk as it
is in the interface.The above directs us to construct an atomistic
model of the occluded
Asp and its nearby interfacial carbonates which is consistent with
all these data, and with ordinary chemical intuition as shown in Figure . The model describes
the molecular occlusion of Asp in the parent precipitates—high-
and low-[Asp] vaterites, as well as in the spontaneously evolving
low-[Asp] calcite. None of our NMR evidence indicates changes in the
average interaction distances or association numbers, and therefore,
our visualization suggests that each interfacial regime is similar
to all others.
Figure 7
Visualization[82] of the vaterite-to-calcite
transformation, summarizing our observations of the interfacial regions
superposed on the crystal lattice. At left, the vaterite lattice (pseudotriangles),
calcium cations, and water molecules. The dark and red triangles represent
the DVA and DV carbonates, respectively; the red and blue
arrows represent the REDOR-invisible and REDOR-measurable 15N–13C distances, respectively. At right, the calcite
lattice with the occluded interfacial region on top; the aspartic
acid remains entrapped in the lattice. The dark and red triangles
represent the DCA and DC carbonates that emerged from the
DVA and DV carbonates as a result of the transformation.
Water molecules reside primarily at the DV and DC regions mediating
with calcium cations the interactions to the methylene, methine, and
charged carboxylates of Asp. Small-scale reorientation of the amino
acid, and adjustments in the orientations and distances of the bulky
carbonates, are possible, but the interfacial region remains largely
unchanged as the lattice undergoes relaxation to the more stable and
denser calcite phase. Calcium atoms indicated in light blue, oxygen
in red, carbon in gray, nitrogen in blue.
Visualization[82] of the vaterite-to-calcite
transformation, summarizing our observations of the interfacial regions
superposed on the crystal lattice. At left, the vaterite lattice (pseudotriangles),
calcium cations, and water molecules. The dark and red triangles represent
the DVA and DV carbonates, respectively; the red and blue
arrows represent the REDOR-invisible and REDOR-measurable 15N–13C distances, respectively. At right, the calcite
lattice with the occluded interfacial region on top; the aspartic
acid remains entrapped in the lattice. The dark and red triangles
represent the DCA and DC carbonates that emerged from the
DVA and DV carbonates as a result of the transformation.
Water molecules reside primarily at the DV and DC regions mediating
with calcium cations the interactions to the methylene, methine, and
charged carboxylates of Asp. Small-scale reorientation of the amino
acid, and adjustments in the orientations and distances of the bulky
carbonates, are possible, but the interfacial region remains largely
unchanged as the lattice undergoes relaxation to the more stable and
denser calcite phase. Calcium atoms indicated in light blue, oxygen
in red, carbon in gray, nitrogen in blue.
Insights to Lattice Stability Provided by a Randomly Doped Cubic
Lattice Model
That a resilient interfacial region centered
on an isolated occluded Asp molecule exists has implications for the
regulation of lattice stability, and possibly to other macroscopic
properties such as hardness. Our observations have demonstrated that,
between 0.5 and 1.2 mol % of Asp, as are found for our low- and high-[Asp]
calcium carbonates, there is a critical concentration above which
the barrier to the solid–solid phase transition from vaterite
to calcite is high enough to suppress the spontaneous transformation
to calcite.Given the macroscopic densities of CaCO3 (2.66 g/cm3 for vaterite, and 2.71 g/cm3 for
calcite), a formula unit in either of our calcium carbonate polymorphs
occupies a volume of approximately 64 Å3. For a crystal
incorporating Asp at the 0.5 and 1.2 mol % levels, the average volume
expected to contain a single Asp is 13 000–5000 Å3. While these volumes may seem large, if we consider instead
the average Asp···Asp distances, they are surprisingly
short at only about 25–17 Å, and any “Asp-free
bulk” found in these mesocrystals is likely to contain no more
than a few hundred CaCO3 formula units. This suggests that
at even modest concentrations Asp impurities are an essential feature
of the bulk, rather than an irrelevant irritant. As the perturbed
region of the crystal is composed of not just an individual Asp, but
rather includes a persistent shell of distorted CaCO3 units
nearby, the volume of unperturbed “bulk” is reduced
yet further.To first order the Asp can be assumed to incorporate
randomly,
though the observed anticooperativity implies that close Asp–Asp
distances are avoided. To estimate distance distributions we assume,
for the sake of simplicity, a cubic lattice model (as illustrated
in Figure a and detailed
in the SI). A formula unit of CaCO3 is represented by a white cube of a 4 Å edge, where
each Asp impurity is represented by a red, double-sized block—quite
nearly the volume of an Asp molecule. The latter are implanted randomly
in a large volume so as to achieve the prespecified concentrations,
though care is taken to avoid all contacts between impurities—thus
recognizing the NMR observations of anticooperativity of insertion
and that each Asp is embedded in a shell of only calcium carbonate
and water. As many of the properties of random distributions are not
sensitive to crystallographic verisimilitude, from each such model
lattice we assess the distribution of nearest neighbor distances between
red (Asp) blocks, or between red and white blocks, as shown in Figure b,c. These distributions
should approximately represent the distances found in our samples
and with some care represent also the volumes of Asp-free domains—and
more importantly the strong dependence on the dopant concentration
as seen for the two experimental 0.5 and 1.2 mol % occlusion levels.
Figure 8
(a) Illustration
of the cubic CaCO3 lattice doped with l-Asp. A
CaCO3 formula unit is represented by a white
cube (of 4 Å edge) while an occluded Asp is represented by a
red box made of two connected cubes. (b, c) Simulations of distance
distributions of nearest neighbor red sites representing Asp pairs,
for white and red sites representing CO32– and Asp, for the two experimental occlusion levels of 0.5 and 1.2
mol %. No red boxes are allowed to adjoin other red boxes. The distance
units are given in multiples of the lattice unit (see the SI).
(a) Illustration
of the cubic CaCO3 lattice doped with l-Asp. A
CaCO3 formula unit is represented by a white
cube (of 4 Å edge) while an occluded Asp is represented by a
red box made of two connected cubes. (b, c) Simulations of distance
distributions of nearest neighbor red sites representing Asp pairs,
for white and red sites representing CO32– and Asp, for the two experimental occlusion levels of 0.5 and 1.2
mol %. No red boxes are allowed to adjoin other red boxes. The distance
units are given in multiples of the lattice unit (see the SI).The simulations show, for example, that at 0.5 mol % of red cubes
in a white matrix over 80% of occluded molecules have another occluded
molecule within 4 lattice units—while at 1.2 mol % nearly 90%
of the red sites have near-neighbors within 3 lattice units. For the
white cubes representing carbonates, large Asp-free regions are quite
rare; at 0.5 mol % nearly 80% have red neighbors within 4 lattice
units—and at 1.2 mol % less than 5% of white cubes are further
than that from the nearest red neighbor. Thus, even at seemingly low
concentration of occlusion sites they are proximate to much of the
“bulk” material.What are the implications of
the above findings? We are interested
in the unstable–stable transition in doped vaterite as the
Asp impurity concentration increases. The resilience of the occlusion
cluster is evidence that this unit is not driving the transformation;
in fact, if there is any direct effect, it is more likely that these
occlusions resist the transformation. What would then be the driving
force of the transformation? An effective driving force appears to
require Asp-free domains whose size and abundance are larger than
some critical values, as in low-[Asp] vaterite; above the critical
Asp concentration, as in high-[Asp] vaterite, sufficiently large Asp-free
domains become rare, and it would seem that Asp-free domains of sufficient
size are the loci for initiation and propagation of the solid–solid
phase transformation. The remaining nanogranular pattern of vaterite
in the forming calcite facets (SI, Figure S6; Figure h) further
suggests that the transformation initiates in multiple remote loci,
yet their ability to propagate and efficiently coalesce across granule
boundaries is quite limited. The above analysis portrays the mechanism
of the solid–solid phase transformation—vaterite-to-calcite—that
we observe experimentally.We note that dopant concentration
should also affect factors such
as the thermodynamic driving force for the transformation, i.e., the
difference in the chemical potentials of the starting vaterite and
the final calcite, none of which are those of the pure polymorphs
as both are infiltrated composites. As such, the above realizations
should serve as a point of origin for computational studies to further
elucidate the role exerted by randomly incorporated small molecules
in the stabilization/destabilization of such perturbed lattices.
Macroscopic Properties: Beyond Lattice Stability
Using
practically the same model system, Meldrum and co-workers[18] showed recently that hardness of calcite increases
as the concentration of incorporated amino acids (Asp or Gly) is increased,
until it eventually matches that of biogenic calcites. They have attributed
the increase in hardness to a retardation of dislocation motions by
the occluded amino acids defects. A question raised by the authors
related to whether the occluded amino acid acts individually as a
point defect, or—cooperatively with the occluding environment—as
a second phase particle defect.This issue would appear to be
directly addressed by our NMR results, which describe the occlusion
shell and the occluded amino acid as a resilient perturbing unit.
The occlusion unit is characterized by flexibility with regard to
mild perturbations, as the dihedral angles between covalent bonds
can reorient nondestructively so as to facilitate mild reorganization.
This resilience should increase in proportion to the increasing dopant
concentration. That the observed hardness is sensitive to occlusion
level but insensitive to the identity of the occluded amino acid is
also consistent with our description of the perturbing unit, as the
occlusion shell containing an amino acid and the surrounding carbonates
presents a similar external surface of disordered carbonates to the
unperturbed lattice.The origin of the observed retardation
would appear to be in the
geometric constraints which characterize covalent bonds, which are
highly directional and not easily lengthened or shortened. Rearrangements
in a background field of distributed charges which are not strongly
directional must inevitably be more readily accomplished than the
reorganization of a multiatom complex—a molecule—highly
constrained by the fixed bond lengths and angles.Although both
stability and hardness respond similarly to increased
defect concentration there are essential differences. Hardness measures
the response—shearing—of the crystalline composite matrix
when subjected to external force, while stability is a measure of
response—overall reorganization—to internal chemical
and ultimately thermodynamic driving forces. While the underlying
principles may differ, the understanding of both mechanisms appears
to find its roots in our detailed description of the occlusion shell.The importance of our observations extends far beyond our particular
systems. In many disparate synthetic fields new and desirable properties
are sought by optimizing kinetic control in exchange for thermodynamic
control. Accessing structures such as the “Asp-doped”
calcite, or the recent example of Balcite lattices with a wide range
of Ba:Ca ratios,[83] requires evolution through
intermediate precipitation–crystallization pathways which can
lead to relatively high concentrations of trapped foreign species
or varied compositions that would otherwise have been rejected on
the pathway to single crystals grown from solutions at close to thermodynamic
equilibrium conditions. The direct molecular level identification
of the forming interfacial structures in such composites is a key
to comprehensive understanding of their properties and for their rational
design.
Conclusions
Intracrystalline occlusions
and the resulting buried interfaces
are critical components of composite systems as they are often responsible
for enhancing materials properties. As few techniques are available
to directly observe these interfaces, a detailed understanding of
their structural–functional role is limited. In this work we
have shown that ssNMR can sensitively probe such molecular occlusions
as are found in our model system where Asp, coprecipitated with CaCO3, leads to vaterite formation. We observe that Asp occlusion
level tunes the vaterite lattice stability. At high Asp, the lattice
is temporally and thermally stable. However, at low Asp, its stability
decreases, and vaterite spontaneously transforms to calcite via solid–solid
transformation at ambient conditions.We have shown that Asp,
the surrounding inorganic interface, and
co-occluded water molecules act as one disordered unit whose structural
details are relatively insensitive to both dopant concentration and
host lattice (though, of course, the carbonate chemical shifts which
reflect the electronic environment do reflect the
host bulk). Most important is the realization that these units are
resilient—of high stability—even as the bulk undergoes
significant rearrangement. The resilience of these occluded units
is understood to stem from their strong yet flexible interactions
internally and with their immediate occluding matrix, and in that
provide “fixed” points around which rearrangements may
have to occur. These observations explain the concentration-dependent
lattice stability and also highlight the mechanistic details of the
solid–solid transformation (low-[Asp]). Moreover, the realization
of the structure of the occlusion unit and its properties, as accomplished
here, appear to go beyond stability suggesting insight into understanding
factors governing also other properties, for example, lattice hardness.[18]Where we can reveal the nature of the
interaction interface (in
this work, those carbonates impacted by the presence of occluded Asp),
this study highlights important fundamental aspects that are central
also to the broad field of crystal growth and design, to the accompanying
phase transformations, and to the intricate details of “intracrystalline”
occlusions. As demonstrated by this study, solid-state NMR is uniquely
equipped to identify the internal structure, the interactions between
the components, the structure of the interfaces whether buried or
exposed, and the roles played in determining the materials properties
and functionality. Such NMR-based insight constitutes an essential
complementary component to be employed in concert with other spectroscopic,
microscopic, and structural methods where both a fundamental understanding
and practical applications are sought.
Authors: Anat Akiva-Tal; Shifi Kababya; Yael S Balazs; Lilah Glazer; Amir Berman; Amir Sagi; Asher Schmidt Journal: Proc Natl Acad Sci U S A Date: 2011-08-22 Impact factor: 11.205
Authors: Julyan H E Cartwright; Antonio G Checa; Julian D Gale; Denis Gebauer; C Ignacio Sainz-Díaz Journal: Angew Chem Int Ed Engl Date: 2012-11-04 Impact factor: 15.336