Literature DB >> 32684879

Accurate high-resolution single-crystal diffraction data from a Pilatus3 X CdTe detector.

Lennard Krause1, Kasper Tolborg1, Thomas Bjørn Egede Grønbech1, Kunihisa Sugimoto2, Bo Brummerstedt Iversen1, Jacob Overgaard1.   

Abstract

Hybrid photon-counting detectors are widely established at third-generation synchrotron facilities and the specifications of the Pilatus3 X CdTe were quickly recognized as highly promising in charge-density investigations. This is mainly attributable to the detection efficiency in the high-energy X-ray regime, in combination with a dynamic range and noise level that should overcome the perpetual problem of detecting strong and weak data simultaneously. These benefits, however, come at the expense of a persistent problem for high diffracted beam flux, which is particularly problematic in single-crystal diffraction of materials with strong scattering power and sharp diffraction peaks. Here, an in-depth examination of data collected on an inorganic material, FeSb2, and an organic semiconductor, rubrene, revealed systematic differences in strong intensities for different incoming beam fluxes, and the implemented detector intensity corrections were found to be inadequate. Only significant beam attenuation for the collection of strong reflections was able to circumvent this systematic error. All data were collected on a bending-magnet beamline at a third-generation synchrotron radiation facility, so undulator and wiggler beamlines and fourth-generation synchrotrons will be even more prone to this error. On the other hand, the low background now allows for an accurate measurement of very weak intensities, and it is shown that it is possible to extract structure factors of exceptional quality using standard crystallographic software for data processing (SAINT-Plus, SADABS and SORTAV), although special attention has to be paid to the estimation of the background. This study resulted in electron-density models of substantially higher accuracy and precision compared with a previous investigation, thus for the first time fulfilling the promise of photon-counting detectors for very accurate structure factor measurements. © International Union of Crystallography 2020.

Entities:  

Keywords:  electron density; hybrid single-photon-counting area detectors; inorganic chemistry; materials science; synchrotron radiation

Year:  2020        PMID: 32684879      PMCID: PMC7312157          DOI: 10.1107/S1600576720003775

Source DB:  PubMed          Journal:  J Appl Crystallogr        ISSN: 0021-8898            Impact factor:   3.304


  21 in total

1.  On the significance of Bragg reflections.

Authors:  Mads Ry Vogel Jørgensen; Helle Svendsen; Mette Stokkebro Schmøkel; Jacob Overgaard; Bo Brummerstedt Iversen
Journal:  Acta Crystallogr A       Date:  2012-02-16       Impact factor: 2.290

2.  Statistical tests against systematic errors in data sets based on the equality of residual means and variances from control samples: theory and applications.

Authors:  Julian Henn; Kathrin Meindl
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-29       Impact factor: 2.290

Review 3.  Electron Density Studies in Materials Research.

Authors:  Kasper Tolborg; Bo B Iversen
Journal:  Chemistry       Date:  2019-09-18       Impact factor: 5.236

4.  Reconciling Crystallographic and Physical Property Measurements on Thermoelectric Lead Sulfide.

Authors:  Christian Moeslund Zeuthen; Peter Skjøtt Thorup; Nikolaj Roth; Bo Brummerstedt Iversen
Journal:  J Am Chem Soc       Date:  2019-05-10       Impact factor: 15.419

5.  Consistent Gaussian basis sets of triple-zeta valence with polarization quality for solid-state calculations.

Authors:  Michael F Peintinger; Daniel Vilela Oliveira; Thomas Bredow
Journal:  J Comput Chem       Date:  2012-10-31       Impact factor: 3.376

6.  Optimal fine φ-slicing for single-photon-counting pixel detectors.

Authors:  Marcus Mueller; Meitian Wang; Clemens Schulze-Briese
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-12-09

7.  Comparison of silver and molybdenum microfocus X-ray sources for single-crystal structure determination.

Authors:  Lennard Krause; Regine Herbst-Irmer; George M Sheldrick; Dietmar Stalke
Journal:  J Appl Crystallogr       Date:  2015-01-30       Impact factor: 3.304

Review 8.  Contemporary X-ray electron-density studies using synchrotron radiation.

Authors:  Mads R V Jørgensen; Venkatesha R Hathwar; Niels Bindzus; Nanna Wahlberg; Yu-Sheng Chen; Jacob Overgaard; Bo B Iversen
Journal:  IUCrJ       Date:  2014-08-29       Impact factor: 4.769

9.  Transforming X-ray detection with hybrid photon counting detectors.

Authors:  Andreas Förster; Stefan Brandstetter; Clemens Schulze-Briese
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2019-06-17       Impact factor: 4.226

10.  Estimation of errors in diffraction data measured by CCD area detectors.

Authors:  David Waterman; Gwyndaf Evans
Journal:  J Appl Crystallogr       Date:  2010-10-01       Impact factor: 3.304

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  3 in total

1.  Tuneable local order in thermoelectric crystals.

Authors:  Nikolaj Roth; Jonas Beyer; Karl F F Fischer; Kaiyang Xia; Tiejun Zhu; Bo B Iversen
Journal:  IUCrJ       Date:  2021-06-30       Impact factor: 4.769

2.  Epitaxial intergrowths and local oxide relaxations in natural bixbyite Fe2-x Mn x O3.

Authors:  Kristoffer Andreas Holm Støckler; Nikolaj Roth; Thomas Bjørn Egede Grønbech; Bo Brummerstedt Iversen
Journal:  IUCrJ       Date:  2022-06-29       Impact factor: 5.588

3.  Relativistic Hirshfeld atom refinement of an organo-gold(I) compound.

Authors:  Sylwia Pawlędzio; Maura Malinska; Magdalena Woińska; Jakub Wojciechowski; Lorraine Andrade Malaspina; Florian Kleemiss; Simon Grabowsky; Krzysztof Woźniak
Journal:  IUCrJ       Date:  2021-05-26       Impact factor: 4.769

  3 in total

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