Literature DB >> 32664725

Integrated In Silico Models for the Prediction of No-Observed-(Adverse)-Effect Levels and Lowest-Observed-(Adverse)-Effect Levels in Rats for Sub-chronic Repeated-Dose Toxicity.

Domenico Gadaleta1, Marco Marzo1, Andrey Toropov1, Alla Toropova1, Giovanna J Lavado1, Sylvia E Escher2, Jean Lou C M Dorne3, Emilio Benfenati1.   

Abstract

Repeated-dose toxicity (RDT) is a critical endpoint for hazard characterization of chemicals and is assessed to derive safe levels of exposure for human health. Here we present the first attempt to model simultaneously no-observed-(adverse)-effect level (NO(A)EL) and lowest-observed-(adverse)-effect level (LO(A)EL). Classification and regression models were derived based on rat sub-chronic repeated dose toxicity data for 327 compounds from the Fraunhofer RepDose database. Multi-category classification models were built for both NO(A)EL and LO(A)EL though a consensus of statistics- and fragment-based algorithms, while regression models were based on quantitative relationships between the endpoints and SMILES-based attributes. NO(A)EL and LO(A)EL models were integrated, and predictions were compared to exclude inconsistent values. This strategy improved the performance of single models, leading to R2 greater than 0.70, root-mean-square error (RMSE) lower than 0.60 (for regression models), and accuracy of 0.61-0.73 (for classification models) on the validation set, based on the endpoint and the threshold applied for selecting predictions. This study confirms the effectiveness of the modeling strategy presented here for assessing RDT of chemicals using in silico models.

Entities:  

Year:  2020        PMID: 32664725     DOI: 10.1021/acs.chemrestox.0c00176

Source DB:  PubMed          Journal:  Chem Res Toxicol        ISSN: 0893-228X            Impact factor:   3.739


  5 in total

1.  Using VEGAHUB Within a Weight-of-Evidence Strategy.

Authors:  Serena Manganelli; Alessio Gamba; Erika Colombo; Emilio Benfenati
Journal:  Methods Mol Biol       Date:  2022

2.  In Silico Models for Repeated-Dose Toxicity (RDT): Prediction of the No Observed Adverse Effect Level (NOAEL) and Lowest Observed Adverse Effect Level (LOAEL) for Drugs.

Authors:  Fabiola Pizzo; Domenico Gadaleta; Emilio Benfenati
Journal:  Methods Mol Biol       Date:  2022

3.  In Silico Methods for Environmental Risk Assessment: Principles, Tiered Approaches, Applications, and Future Perspectives.

Authors:  Maria Chiara Astuto; Matteo R Di Nicola; José V Tarazona; A Rortais; Yann Devos; A K Djien Liem; George E N Kass; Maria Bastaki; Reinhilde Schoonjans; Angelo Maggiore; Sandrine Charles; Aude Ratier; Christelle Lopes; Ophelia Gestin; Tobin Robinson; Antony Williams; Nynke Kramer; Edoardo Carnesecchi; Jean-Lou C M Dorne
Journal:  Methods Mol Biol       Date:  2022

4.  Monte Carlo Models for Sub-Chronic Repeated-Dose Toxicity: Systemic and Organ-Specific Toxicity.

Authors:  Gianluca Selvestrel; Giovanna J Lavado; Alla P Toropova; Andrey A Toropov; Domenico Gadaleta; Marco Marzo; Diego Baderna; Emilio Benfenati
Journal:  Int J Mol Sci       Date:  2022-06-14       Impact factor: 6.208

5.  Defining the Human-Biota Thresholds of Toxicological Concern for Organic Chemicals in Freshwater: The Proposed Strategy of the LIFE VERMEER Project Using VEGA Tools.

Authors:  Diego Baderna; Roberta Faoro; Gianluca Selvestrel; Adrien Troise; Davide Luciani; Sandrine Andres; Emilio Benfenati
Journal:  Molecules       Date:  2021-03-30       Impact factor: 4.411

  5 in total

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