Literature DB >> 32663903

A virtual ELISA to quantitate COVID-19 antibodies in patient serum.

Kevin Simpson1, Henry V Jakubowski2.   

Abstract

Enzyme-linked immunosorbent assays (ELISAs) are used widely in biotechnology, pharmaceutical, and clinical medicine labs. At the same time, they appear to be underrepresented in chemistry and biochemistry curricula, even though their sensitivity, selectivity, and ease of use would argue for their widespread use. We describe here an online ELISA activity suitable for stand-alone use or in conjunction with an actual wet lab ELISA. Specifically, we offer real and mock data for a hypothetical ELISA to detect plasma antibodies to COVID-19 in infected patients who have had the disease. Much of the activity focuses on chemical and mathematical models to fit ELISA or any macromolecule/ligand binding data, a skill that addresses perhaps the most relevant and difficult learning goal of an ELISA experiment.
© 2020 International Union of Biochemistry and Molecular Biology.

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Keywords:  distance learning; laboratory exercises; web-based learning

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Year:  2020        PMID: 32663903      PMCID: PMC7405027          DOI: 10.1002/bmb.21403

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


We describe a virtual online enzyme‐linked immunosorbent assay (ELISAs) lab experience used with 12 junior/senior chemistry majors in April 2020 in a half‐semester advanced biochemistry techniques lab course. The lab was scheduled to meet twice a week (2 × 4 hr) before all classes moved online due to the COVID pandemic. In a 4‐h virtual lab, students screened hypothetical human sera samples for antibodies against SARS‐CoV‐2 (COVID‐19) and studied the chemical and mathematical bases for ELISA data fitting. ELISAs have detection limits varying between 0.01 pg/ml and 100 ng/ml. Given their robust use in health fields, they are neither widely used in undergraduate biochemistry or chemistry courses, nor are they mentioned in the ACS's Guidelines and Supplements for either Analytical Chemistry or Biochemistry. Few papers have been published involving purely educational uses of ELISAs , , and those that do often center on a specific research project or for use in biotechnology programs. One report documents a hybrid wet‐simulated lab ELISA. Most of the wet‐lab steps in ELISAs involve pipetting skills and can be replaced by a virtual laboratory exercise. Understanding the underlying chemical equilibria and mathematical analyses does not require a wet lab. Perhaps the most challenging learning goals for ELISAs for students involve understanding the chemical and mathematical equations, choice and use of modeling and analysis software, and test validity/reliability. These goals are consistent with ASBMBs “process of science” skills and the results from the NEEDED MATH Conference, a NSF Advanced Technological Education initiative. All written materials in support of this lab are found in Data S1–S6. Students were asked to complete prelab activities (videos, , prelab quiz and survey, and reading materials). A brief introduction was given at the start of a 4‐h Zoom class. Students were separated into meeting rooms with a lab partner. The instructor was available through the 4‐h scheduled time to address questions. A POGIL ‐like laboratory introduction and data analysis activity was used (see Data S1–S6). We used actual ELISA plate data developed previously for another activity. In addition, we used simulated data made with a four‐parameter logistic equation to show how changes in parameters affect data fitting. Data analysis was performed using free web software and commercial software available through a 30‐day free license. The same prequiz was given to students during finals week. The average score improved from a small amount 67.5–70%, but we do not pretend that we have done a rigorous assessment of this online virtual lab activity. Likert scale self‐report surveys show that students understood the chemical principles and each step of the ELISA but still struggled with the math. Most felt that they would have liked a wet lab experiment. In a way these results are not unexpected given it was the last lab of a trying online semester. This virtual lab should provide a practical and translatable skillset needed in a real‐world lab environment. The provided materials are scalable for future development to address additional concepts including long‐term validation of the assay using statistical analyses of low and high controls and use of ELISA data to make final recommendations for a company or lab. Data S1 ELISA procedure Click here for additional data file. Data S2 COVID‐19 student project 2020 Click here for additional data file. Data S3 Mock ELISA data Click here for additional data file. Data S4 Instructor data graphs Click here for additional data file. Data S5 Supplementary quiz ELISAs Click here for additional data file. Data S6 Supplementary survey ELISAs Click here for additional data file.
  5 in total

1.  Predicting detection limits of enzyme-linked immunosorbent assay (ELISA) and bioanalytical techniques in general.

Authors:  Shiyun Zhang; Alexa Garcia-D'Angeli; Joseph P Brennan; Qun Huo
Journal:  Analyst       Date:  2014-01-21       Impact factor: 4.616

2.  Immunological tools: engaging students in the use and analysis of flow cytometry and enzyme-linked immunosorbent assay (ELISA).

Authors:  Laura E Ott; Susan Carson
Journal:  Biochem Mol Biol Educ       Date:  2014-07-23       Impact factor: 1.160

3.  A Simple Test Tube-Based ELISA Experiment for the High-School Classroom.

Authors:  Ann Brokaw; Brian A Cobb
Journal:  Biochem Mol Biol Educ       Date:  2009-07       Impact factor: 1.160

4.  Simulated sandwich enzyme-linked immunosorbent assay for a cost-effective investigation of natural and engineered cellular signaling pathways.

Authors:  Paul R Jaschke
Journal:  Biochem Mol Biol Educ       Date:  2019-09-18       Impact factor: 1.160

5.  A virtual ELISA to quantitate COVID-19 antibodies in patient serum.

Authors:  Kevin Simpson; Henry V Jakubowski
Journal:  Biochem Mol Biol Educ       Date:  2020-07-14       Impact factor: 1.160

  5 in total
  2 in total

1.  A virtual ELISA to quantitate COVID-19 antibodies in patient serum.

Authors:  Kevin Simpson; Henry V Jakubowski
Journal:  Biochem Mol Biol Educ       Date:  2020-07-14       Impact factor: 1.160

2.  Run length encoding based wavelet features for COVID-19 detection in X-rays.

Authors:  Ahmad Sarhan
Journal:  BJR Open       Date:  2021-02-02
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