Literature DB >> 32661148

The unusual dRemp retrotransposon is abundant, highly mutagenic, and mobilized only in the second pollen mitosis of some maize lines.

Qinghua Wang1, Jun Huang1, Yubin Li1, Hugo K Dooner2,3.   

Abstract

The frequent mutations recovered recently from the pollen of select maize lines resulted from the meiotic mobilization of specific low-copy number long-terminal repeat (LTR) retrotransposons, which differ among lines. Mutations that arise at male meiosis produce kernels with concordant mutant phenotypes in both endosperm and embryo because the two sperms that participate in double fertilization are genetically identical. Those are in a majority. However, a small minority of kernels with a mutant endosperm carry a nonconcordant normal embryo, pointing to a postmeiotic or microgametophytic origin. In this study, we have identified the basis for those nonconcordant mutations. We find that all are produced by transposition of a defective LTR retrotransposon that we have termed dRemp (defective retroelement mobile in pollen). This element has several unique properties. Unlike the mutagenic LTR retrotransposons identified previously, dRemp is present in hundreds of copies in all sequenced lines. It seems to transpose only at the second pollen mitosis because all dRemp insertion mutants are nonconcordant yet recoverable in either the endosperm or the embryo. Although it does not move in most lines, dRemp is highly mobile in the Corn Belt inbred M14, identified earlier by breeders as being highly unstable. Lastly, it can be recovered in an array of structures, ranging from solo LTRs to tandem dRemp repeats containing several internal LTRs, suggestive of extensive recombination during retrotransposition. These results shed further light on the spontaneous mutation process and on the possible basis for inbred instability in maize.

Entities:  

Keywords:  LTR retrotransposon; maize; pollen; postmeiotic transposition; spontaneous mutation

Mesh:

Substances:

Year:  2020        PMID: 32661148      PMCID: PMC7395433          DOI: 10.1073/pnas.2010234117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites.

Authors:  Kejun Liu; Major Goodman; Spencer Muse; J Stephen Smith; Ed Buckler; John Doebley
Journal:  Genetics       Date:  2003-12       Impact factor: 4.562

2.  The Nature and Extent of Hetero-Fertilization in Maize.

Authors:  G F Sprague
Journal:  Genetics       Date:  1932-05       Impact factor: 4.562

3.  Gene tagging with engineered Ds elements in maize.

Authors:  Yubin Li; Gregorio Segal; Qinghua Wang; Hugo K Dooner
Journal:  Methods Mol Biol       Date:  2013

Review 4.  Retrotransposon replication in plants.

Authors:  Alan H Schulman
Journal:  Curr Opin Virol       Date:  2013-09-12       Impact factor: 7.090

5.  Origin of spontaneous mutations in maize has been hiding in plain sight.

Authors:  Susan R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-14       Impact factor: 11.205

6.  Structure of the R r tandem duplication in maize.

Authors:  H K Dooner; J L Kermicle
Journal:  Genetics       Date:  1971-03       Impact factor: 4.562

7.  Reprogramming of DNA methylation in pollen guides epigenetic inheritance via small RNA.

Authors:  Joseph P Calarco; Filipe Borges; Mark T A Donoghue; Frédéric Van Ex; Pauline E Jullien; Telma Lopes; Rui Gardner; Frédéric Berger; José A Feijó; Jörg D Becker; Robert A Martienssen
Journal:  Cell       Date:  2012-09-20       Impact factor: 41.582

8.  Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L.

Authors:  C Vitte; O Panaud
Journal:  Mol Biol Evol       Date:  2003-03-05       Impact factor: 16.240

9.  MaizeGDB 2018: the maize multi-genome genetics and genomics database.

Authors:  John L Portwood; Margaret R Woodhouse; Ethalinda K Cannon; Jack M Gardiner; Lisa C Harper; Mary L Schaeffer; Jesse R Walsh; Taner Z Sen; Kyoung Tak Cho; David A Schott; Bremen L Braun; Miranda Dietze; Brittney Dunfee; Christine G Elsik; Nancy Manchanda; Ed Coe; Marty Sachs; Philip Stinard; Josh Tolbert; Shane Zimmerman; Carson M Andorf
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

10.  Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome.

Authors:  Regina S Baucom; James C Estill; Cristian Chaparro; Naadira Upshaw; Ansuya Jogi; Jean-Marc Deragon; Richard P Westerman; Phillip J Sanmiguel; Jeffrey L Bennetzen
Journal:  PLoS Genet       Date:  2009-11-20       Impact factor: 5.917

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