Literature DB >> 32653101

Reverse Transcriptase: From Transcriptomics to Genome Editing.

Samara Martín-Alonso1, Estrella Frutos-Beltrán1, Luis Menéndez-Arias2.   

Abstract

Reverse transcriptases (RTs) are enzymes that can generate a complementary strand of DNA (cDNA) from RNA. Coupled with PCR, RTs have been widely used to detect RNAs and to clone expressed genes. Classical retroviral RTs have been improved by protein engineering. These enzymes and newly characterized RTs are key elements in the development of next-generation sequencing techniques that are now being applied to the study of transcriptomics. In addition, engineered RTs fused to a CRISPR/Cas9 nickase have recently shown great potential as tools to manipulate eukaryotic genomes. In this review, we discuss the properties and uses of wild type and engineered RTs in biotechnological applications, from conventional RT-PCR to recently introduced prime editing.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Keywords:  RNA-seq; RT-PCR; fidelity; next-generation sequencing; prime editors; reverse transcriptase

Year:  2020        PMID: 32653101     DOI: 10.1016/j.tibtech.2020.06.008

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  12 in total

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Authors:  Yanjing Wang; Zeyuan Guan; Chen Wang; Yangfan Nie; Yibei Chen; Zhaoyang Qian; Yongqing Cui; Han Xu; Qiang Wang; Fen Zhao; Delin Zhang; Pan Tao; Ming Sun; Ping Yin; Shuangxia Jin; Shan Wu; Tingting Zou
Journal:  Nat Microbiol       Date:  2022-08-18       Impact factor: 30.964

3.  Group II intron-like reverse transcriptases function in double-strand break repair.

Authors:  Seung Kuk Park; Georg Mohr; Jun Yao; Rick Russell; Alan M Lambowitz
Journal:  Cell       Date:  2022-09-15       Impact factor: 66.850

Review 4.  CRISPR-based genome editing through the lens of DNA repair.

Authors:  Tarun S Nambiar; Lou Baudrier; Pierre Billon; Alberto Ciccia
Journal:  Mol Cell       Date:  2022-01-20       Impact factor: 17.970

Review 5.  M-MuLV reverse transcriptase: Selected properties and improved mutants.

Authors:  Igor P Oscorbin; Maxim L Filipenko
Journal:  Comput Struct Biotechnol J       Date:  2021-11-22       Impact factor: 7.271

6.  An Ultrafast One-Step Quantitative Reverse Transcription-Polymerase Chain Reaction Assay for Detection of SARS-CoV-2.

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Journal:  Front Microbiol       Date:  2021-11-04       Impact factor: 6.064

7.  A Rapid, Highly Sensitive and Open-Access SARS-CoV-2 Detection Assay for Laboratory and Home Testing.

Authors:  Max J Kellner; James J Ross; Jakob Schnabl; Marcus P S Dekens; Martin Matl; Robert Heinen; Irina Grishkovskaya; Benedikt Bauer; Johannes Stadlmann; Luis Menéndez-Arias; Andrew D Straw; Robert Fritsche-Polanz; Marianna Traugott; Tamara Seitz; Alexander Zoufaly; Manuela Födinger; Christoph Wenisch; Johannes Zuber; Andrea Pauli; Julius Brennecke
Journal:  Front Mol Biosci       Date:  2022-04-01

Review 8.  Mechanistic Interplay between HIV-1 Reverse Transcriptase Enzyme Kinetics and Host SAMHD1 Protein: Viral Myeloid-Cell Tropism and Genomic Mutagenesis.

Authors:  Nicole E Bowen; Adrian Oo; Baek Kim
Journal:  Viruses       Date:  2022-07-26       Impact factor: 5.818

Review 9.  Prokaryotic reverse transcriptases: from retroelements to specialized defense systems.

Authors:  Alejandro González-Delgado; Mario Rodríguez Mestre; Francisco Martínez-Abarca; Nicolás Toro
Journal:  FEMS Microbiol Rev       Date:  2021-11-23       Impact factor: 16.408

Review 10.  The Role of Indoor Plants in air Purification and Human Health in the Context of COVID-19 Pandemic: A Proposal for a Novel Line of Inquiry.

Authors:  Rania El-Tanbouly; Ziad Hassan; Sarah El-Messeiry
Journal:  Front Mol Biosci       Date:  2021-06-30
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