Literature DB >> 32650186

The relationship between DNA methylation in neurotrophic genes and age as evidenced from three independent cohorts: differences by delirium status.

Taku Saito1, Patricia R Braun2, Sophia Daniel3, Sydney S Jellison3, Mandy Hellman3, Eri Shinozaki4, Sangil Lee5, Hyunkeun R Cho6, Aihide Yoshino7, Hiroyuki Toda7, Gen Shinozaki8.   

Abstract

We previously reported the association between DNA methylation (DNAm) of pro-inflammatory cytokine genes and age. In addition, neurotrophic factors are known to be associated with age and neurocognitive disorders. Therefore, we hypothesized that DNAm of neurotrophic genes change with age, especially in delirium patients. DNAm was analyzed using the Illumina HumanMethylation450 or HumanMethylationEPIC BeadChip Kit in 3 independent cohorts: blood from 383 Grady Trauma Project subjects, brain from 21 neurosurgery patients, and blood from 87 inpatients with and without delirium. Both blood and brain samples showed that most of the DNAm of neurotrophic genes were positively correlated with age. Furthermore, DNAm of neurotrophic genes was more positively correlated with age in delirium cases than in non-delirium controls. These findings support our hypothesis that the neurotrophic genes may be epigenetically modulated with age, and this process may be contributing to the pathophysiology of delirium.
Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Age; BDNF; Delirium; GDNF; Genome-wide DNA methylation; Neurotrophic factor

Mesh:

Substances:

Year:  2020        PMID: 32650186      PMCID: PMC7444651          DOI: 10.1016/j.neurobiolaging.2020.06.003

Source DB:  PubMed          Journal:  Neurobiol Aging        ISSN: 0197-4580            Impact factor:   5.133


  53 in total

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Authors:  Xi Mei; Jianbin Tong
Journal:  J Anesth       Date:  2016-07-09       Impact factor: 2.078

Review 2.  Using epigenome-wide association scans of DNA methylation in age-related complex human traits.

Authors:  Pei-Chien Tsai; Tim D Spector; Jordana T Bell
Journal:  Epigenomics       Date:  2012-10       Impact factor: 4.778

3.  Maturation of the human dorsolateral prefrontal cortex coincides with a dynamic shift in microRNA expression.

Authors:  Natalie J Beveridge; Danielle M Santarelli; Xi Wang; Paul A Tooney; Maree J Webster; Cynthia S Weickert; Murray J Cairns
Journal:  Schizophr Bull       Date:  2013-01-31       Impact factor: 9.306

4.  Identification of Patients With High Mortality Risk and Prediction of Outcomes in Delirium by Bispectral EEG.

Authors:  Gen Shinozaki; Nicholas L Bormann; Aubrey C Chan; Kasra Zarei; Nicholas A Sparr; Mason J Klisares; Sydney S Jellison; Jonathan T Heinzman; Elijah B Dahlstrom; Gabrielle N Duncan; Lindsey N Gaul; Robert J Wanzek; Ellyn M Cramer; Charlotte G Wimmel; Sayeh Sabbagh; Kumi Yuki; Michelle T Weckmann; Thoru Yamada; Matthew D Karam; Nicolas O Noiseux; Eri Shinozaki; Hyunkeun R Cho; Sangil Lee; John W Cromwell
Journal:  J Clin Psychiatry       Date:  2019-09-03       Impact factor: 4.384

5.  Epigenome-wide association of PTSD from heterogeneous cohorts with a common multi-site analysis pipeline.

Authors:  Andrew Ratanatharathorn; Marco P Boks; Adam X Maihofer; Allison E Aiello; Ananda B Amstadter; Allison E Ashley-Koch; Dewleen G Baker; Jean C Beckham; Evelyn Bromet; Michelle Dennis; Melanie E Garrett; Elbert Geuze; Guia Guffanti; Michael A Hauser; Varun Kilaru; Nathan A Kimbrel; Karestan C Koenen; Pei-Fen Kuan; Mark W Logue; Benjamin J Luft; Mark W Miller; Colter Mitchell; Nicole R Nugent; Kerry J Ressler; Bart P F Rutten; Murray B Stein; Eric Vermetten; Christiaan H Vinkers; Nagy A Youssef; Monica Uddin; Caroline M Nievergelt; Alicia K Smith
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2017-07-10       Impact factor: 3.568

Review 6.  MicroRNAs in brain aging.

Authors:  Chand Parvez Danka Mohammed; Jun Soo Park; Hong Gil Nam; Keetae Kim
Journal:  Mech Ageing Dev       Date:  2017-01-22       Impact factor: 5.432

Review 7.  Epigenetics and aging.

Authors:  Sangita Pal; Jessica K Tyler
Journal:  Sci Adv       Date:  2016-07-29       Impact factor: 14.136

8.  Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context.

Authors:  Brock C Christensen; E Andres Houseman; Carmen J Marsit; Shichun Zheng; Margaret R Wrensch; Joseph L Wiemels; Heather H Nelson; Margaret R Karagas; James F Padbury; Raphael Bueno; David J Sugarbaker; Ru-Fang Yeh; John K Wiencke; Karl T Kelsey
Journal:  PLoS Genet       Date:  2009-08-14       Impact factor: 5.917

9.  DNA methylation arrays as surrogate measures of cell mixture distribution.

Authors:  Eugene Andres Houseman; William P Accomando; Devin C Koestler; Brock C Christensen; Carmen J Marsit; Heather H Nelson; John K Wiencke; Karl T Kelsey
Journal:  BMC Bioinformatics       Date:  2012-05-08       Impact factor: 3.169

10.  Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.

Authors:  Ruth Pidsley; Elena Zotenko; Timothy J Peters; Mitchell G Lawrence; Gail P Risbridger; Peter Molloy; Susan Van Djik; Beverly Muhlhausler; Clare Stirzaker; Susan J Clark
Journal:  Genome Biol       Date:  2016-10-07       Impact factor: 13.583

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  3 in total

1.  DNA methylation in the inflammatory genes after neurosurgery and diagnostic ability of post-operative delirium.

Authors:  Takehiko Yamanashi; Takaaki Nagao; Nadia E Wahba; Pedro S Marra; Kaitlyn J Crutchley; Alissa A Meyer; Ally J Andreasen; Mandy M Hellman; Sydney S Jellison; Christopher G Hughes; Pratik P Pandharipande; Matthew A Howard Iii; Hiroto Kawasaki; Masaaki Iwata; Marco M Hefti; Gen Shinozaki
Journal:  Transl Psychiatry       Date:  2021-12-09       Impact factor: 6.222

2.  The Potential Protective Effect of Mesencephalic Astrocyte-Derived Neurotrophic Factor on Post-Operative Delirium via Inhibiting Inflammation and Microglia Activation.

Authors:  Jing Liu; Qiling Shen; Huiping Zhang; Xueying Xiao; Changming Lv; Yueyue Chu; Yujun Shen; Dong Wang; Qiying Shen
Journal:  J Inflamm Res       Date:  2021-06-28

3.  Acute Brain-Derived Neurotrophic Factor DNA Methylation Trajectories in Cerebrospinal Fluid and Associations With Outcomes Following Severe Traumatic Brain Injury in Adults.

Authors:  Amery Treble-Barna; Lacey W Heinsberg; Ava M Puccio; John R Shaffer; David O Okonkwo; Sue R Beers; Daniel E Weeks; Yvette P Conley
Journal:  Neurorehabil Neural Repair       Date:  2021-06-25       Impact factor: 3.919

  3 in total

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