Literature DB >> 32649873

Pathogenic Mechanisms of Somatic Mutation and Genome Mosaicism in Aging.

Jan Vijg1, Xiao Dong2.   

Abstract

Age-related accumulation of postzygotic DNA mutations results in tissue genetic heterogeneity known as somatic mosaicism. Although implicated in aging as early as the 1950s, somatic mutations in normal tissue have been difficult to study because of their low allele fractions. With the recent emergence of cost-effective high-throughput sequencing down to the single-cell level, enormous progress has been made in our capability to quantitatively analyze somatic mutations in human tissue in relation to aging and disease. Here we first review how recent technological progress has opened up this field, providing the first broad sets of quantitative information on somatic mutations in vivo necessary to gain insight into their possible causal role in human aging and disease. We then propose three major mechanisms that can lead from accumulated de novo mutations across tissues to cell functional loss and human disease.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  age-related disease; aging; genome mosaicism; pathogenic effects; somatic DNA mutation; transcriptional noise

Mesh:

Year:  2020        PMID: 32649873      PMCID: PMC7354350          DOI: 10.1016/j.cell.2020.06.024

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  32 in total

1.  Meeting Report: Aging Research and Drug Discovery.

Authors:  Esther Meron; Maria Thaysen; Suzanne Angeli; Adam Antebi; Nir Barzilai; Joseph A Baur; Simon Bekker-Jensen; Maria Birkisdottir; Evelyne Bischof; Jens Bruening; Anne Brunet; Abigail Buchwalter; Filipe Cabreiro; Shiqing Cai; Brian H Chen; Maria Ermolaeva; Collin Y Ewald; Luigi Ferrucci; Maria Carolina Florian; Kristen Fortney; Adam Freund; Anastasia Georgievskaya; Vadim N Gladyshev; David Glass; Tyler Golato; Vera Gorbunova; Jan Hoejimakers; Riekelt H Houtkooper; Sibylle Jager; Frank Jaksch; Georges Janssens; Martin Borch Jensen; Matt Kaeberlein; Gerard Karsenty; Peter de Keizer; Brian Kennedy; James L Kirkland; Michael Kjaer; Guido Kroemer; Kai-Fu Lee; Jean-Marc Lemaitre; David Liaskos; Valter D Longo; Yu-Xuan Lu; Michael R MacArthur; Andrea B Maier; Christina Manakanatas; Sarah J Mitchell; Alexey Moskalev; Laura Niedernhofer; Ivan Ozerov; Linda Partridge; Emmanuelle Passegué; Michael A Petr; James Peyer; Dina Radenkovic; Thomas A Rando; Suresh Rattan; Christian G Riedel; Lenhard Rudolph; Ruixue Ai; Manuel Serrano; Björn Schumacher; David A Sinclair; Ryan Smith; Yousin Suh; Pam Taub; Alexandre Trapp; Anne-Ulrike Trendelenburg; Dario Riccardo Valenzano; Kris Verburgh; Eric Verdin; Jan Vijg; Rudi G J Westendorp; Alessandra Zonari; Daniela Bakula; Alex Zhavoronkov; Morten Scheibye-Knudsen
Journal:  Aging (Albany NY)       Date:  2022-01-28       Impact factor: 5.682

2.  Somatic genetic rescue of a germline ribosome assembly defect.

Authors:  Shengjiang Tan; Laëtitia Kermasson; Christine Hilcenko; Vasileios Kargas; David Traynor; Ahmed Z Boukerrou; Norberto Escudero-Urquijo; Alexandre Faille; Alexis Bertrand; Maxim Rossmann; Beatriz Goyenechea; Li Jin; Jonathan Moreil; Olivier Alibeu; Blandine Beaupain; Christine Bôle-Feysot; Stefano Fumagalli; Sophie Kaltenbach; Jean-Alain Martignoles; Cécile Masson; Patrick Nitschké; Mélanie Parisot; Aurore Pouliet; Isabelle Radford-Weiss; Frédéric Tores; Jean-Pierre de Villartay; Mohammed Zarhrate; Ai Ling Koh; Kong Boo Phua; Bruno Reversade; Peter J Bond; Christine Bellanné-Chantelot; Isabelle Callebaut; François Delhommeau; Jean Donadieu; Alan J Warren; Patrick Revy
Journal:  Nat Commun       Date:  2021-08-19       Impact factor: 17.694

Review 3.  Clonal Hematopoiesis: Role in Hematologic and Non-Hematologic Malignancies.

Authors:  Ugo Testa; Germana Castelli; Elvira Pelosi
Journal:  Mediterr J Hematol Infect Dis       Date:  2022-09-01       Impact factor: 3.122

4.  A clinically annotated post-mortem approach to study multi-organ somatic mutational clonality in normal tissues.

Authors:  Tom Luijts; Kerryn Elliott; Joachim Tetteh Siaw; Joris Van de Velde; Elien Beyls; Arne Claeys; Tim Lammens; Erik Larsson; Wouter Willaert; Anne Vral; Jimmy Van den Eynden
Journal:  Sci Rep       Date:  2022-06-20       Impact factor: 4.996

Review 5.  The Dynamics of Somatic Mutagenesis During Life in Humans.

Authors:  Freek Manders; Ruben van Boxtel; Sjors Middelkamp
Journal:  Front Aging       Date:  2021-12-17

Review 6.  Clonal Hematopoiesis Analyses in Clinical, Epidemiologic, and Genetic Aging Studies to Unravel Underlying Mechanisms of Age-Related Dysfunction in Humans.

Authors:  Kenneth Walsh; Nalini Raghavachari; Candace Kerr; Alexander G Bick; Steven R Cummings; Todd Druley; Cynthia E Dunbar; Giulio Genovese; Margaret A Goodell; Siddhartha Jaiswal; Jaroslaw Maciejewski; Pradeep Natarajan; Anastasia V Shindyapina; Alan R Shuldiner; Erik B Van Den Akker; Jan Vijg
Journal:  Front Aging       Date:  2022-03-08

7.  Age-related loss of gene-to-gene transcriptional coordination among single cells.

Authors:  Orr Levy; Guy Amit; Dana Vaknin; Tom Snir; Sol Efroni; Peter Castaldi; Yang-Yu Liu; Haim Y Cohen; Amir Bashan
Journal:  Nat Metab       Date:  2020-11-02

Review 8.  Pregnancy, preeclampsia and maternal aging: From epidemiology to functional genomics.

Authors:  Eliza C Miller; Ashley Wilczek; Natalie A Bello; Sarah Tom; Ronald Wapner; Yousin Suh
Journal:  Ageing Res Rev       Date:  2021-12-03       Impact factor: 10.895

9.  PolyG-DS: An ultrasensitive polyguanine tract-profiling method to detect clonal expansions and trace cell lineage.

Authors:  Yuezheng Zhang; Brendan F Kohrn; Ming Yang; Daniela Nachmanson; T Rinda Soong; I-Hsiu Lee; Yong Tao; Hans Clevers; Elizabeth M Swisher; Teresa A Brentnall; Lawrence A Loeb; Scott R Kennedy; Jesse J Salk; Kamila Naxerova; Rosa Ana Risques
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-03       Impact factor: 11.205

10.  Clinical relevance of postzygotic mosaicism in Cornelia de Lange syndrome and purifying selection of NIPBL variants in blood.

Authors:  Ana Latorre-Pellicer; Marta Gil-Salvador; Ilaria Parenti; Cristina Lucia-Campos; Laura Trujillano; Iñigo Marcos-Alcalde; María Arnedo; Ángela Ascaso; Ariadna Ayerza-Casas; Rebeca Antoñanzas-Pérez; Cristina Gervasini; Maria Piccione; Milena Mariani; Axel Weber; Deniz Kanber; Alma Kuechler; Martin Munteanu; Katharina Khuller; Gloria Bueno-Lozano; Beatriz Puisac; Paulino Gómez-Puertas; Angelo Selicorni; Frank J Kaiser; Feliciano J Ramos; Juan Pié
Journal:  Sci Rep       Date:  2021-07-29       Impact factor: 4.379

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