| Literature DB >> 32643288 |
Robert Jaster1, Yask Gupta2, Sarah Rohde1, Luise Ehlers1, Horst Nizze3, Artem Vorobyev2,4, Ralf J Ludwig2, Saleh M Ibrahim2.
Abstract
The impact of environmental factors, such as diet, and the genetic basis of autoimmune pancreatitis (AIP) are largely unknown. Here, we used an experimental murine AIP model to identify the contribution of diet to AIP development, as well as to fine-map AIP-associated genes in outbred mice prone to develop the disease. For this purpose, we fed mice of an autoimmune-prone intercross line (AIL) three different diets (control, calorie-reduced and western diet) for 6 months, at which point the mice were genotyped and phenotyped for AIP. Overall, 269 out of 734 mice (36.6%) developed AIP with signs of parenchymal destruction, equally affecting mice of both sexes. AIP prevalence and severity were reduced by approximately 50% in mice held under caloric restriction compared to those fed control or western diet. We identified a quantitative trait locus (QTL) on chromosome 4 to be associated with AIP, which is located within a previously reported QTL. This association does not change when considering diet or sex as an additional variable for the mapping. Using whole-genome sequences of the AIL founder strains, we resolved this QTL to a single candidate gene, namely Map3k7. Expression of Map3k7 was largely restricted to islet cells as well as lymphocytes found in the exocrine pancreas of mice with AIP. Our studies suggest a major impact of diet on AIP. Furthermore, we identify Map3k7 as a novel susceptibility gene for experimental AIP. Both findings warrant clinical translation.Entities:
Keywords: zzm321990Map3k7zzm321990; MRL/MpJ mice; QTL mapping; autoimmune pancreatitis; diet; gene-environment interactions; susceptibility genes
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Year: 2020 PMID: 32643288 PMCID: PMC7412411 DOI: 10.1111/jcmm.15540
Source DB: PubMed Journal: J Cell Mol Med ISSN: 1582-1838 Impact factor: 5.310
FIGURE 1Diet modulates the spontaneous development of autoimmune pancreatitis (AIP) in an advanced intercross outbred mouse line (AIL) (A) A total of 734 outbred AIL mice were fed 3 different diets (caloric restriction, control or western diet) for 6 months. Thereafter, mice were genotyped and H&E‐stained sections from the pancreata were evaluated for the presence and (if present) severity of AIP. (B) Pancreatic sections were stained with H&E and subjected to the evaluation of pathological changes on a semi‐quantitative scale from 0 to 4. Stage 0: healthy; stage 1: small infiltrate of mononuclear cells (arrow); stage 2: large periductal focus of mononuclear cells; beginning parenchymal destruction; stage 3: severe inflammation and more extended parenchymal destruction; and stage 4: organ‐wide inflammation; large‐scale destruction of acini and partial replacement by adipose and fibrotic tissue. (C) When stratified for sex, no difference in the AIP severity was noted. Graph shows all individual values as dots, whereas the red line indicates the median. Statistical analysis was performed using rank‐sum test. (D) By contrast, stratification for the different diets showed that mice fed calorie‐reduced diet had a significant lower AIP severity compared to control and western diet‐fed mice. Graph shows all individual values as dots, whereas the red line indicates the median. Statistical analysis was performed using one‐way ANOVA (P < 0.0001) with Tukey's multiple comparison as post‐test
Pancreatic phenotypes of AIL mice. A total of 734 mice (461 females and 273 males, all from G15‐19) were fed the indicated diets for 6 months, before phenotyping was performed by assessing pancreatic histopathology on a semi‐quantitative scale from 0 (healthy pancreas) to 4 (most severe AIP). The unequal sex distribution is due to (i) the sex ratio at birth (which was in favour of females), and (ii) a higher mortality rate in male mice during the 6 months of the experiment
| Sex | Diet | Score pancreas |
Scores 2‐4 (%) |
Scores 0‐1 (%) | ||||
|---|---|---|---|---|---|---|---|---|
| 0 | 1 | 2 | 3 | 4 | ||||
| Female | Caloric restriction | 60 | 7 | 14 | 3 | 0 | 20.2 | 79.8 |
| Control chow | 75 | 87 | 107 | 7 | 0 | 41.3 | 58.7 | |
| Western diet | 43 | 11 | 32 | 14 | 1 | 46.5 | 53.5 | |
| Male | Caloric restriction | 56 | 6 | 14 | 3 | 0 | 21.5 | 78.5 |
| Control chow | 51 | 43 | 41 | 5 | 0 | 32.9 | 67.1 | |
| Western diet | 21 | 5 | 21 | 7 | 0 | 51.9 | 48.1 | |
| Both | Caloric restriction | 116 | 13 | 28 | 6 | 0 | 20.9 | 79.1 |
| Control chow | 126 | 130 | 148 | 12 | 0 | 38.5 | 61.5 | |
| Western diet | 64 | 16 | 53 | 21 | 1 | 48.4 | 51.6 | |
FIGURE 2Map3k7 is associated with experimental autoimmune pancreatitis (A) Manhattan plot for mapping of quantitative trait loci (QTLs) for murine autoimmune pancreatitis (AIP9. The plot shows chromosomes on x‐axis and LOD (log of odd ratios) for each SNP (grey and black dots) on y‐axis. LOD scores were calculated by regressing histological pancreatitis score with the estimated genotype posterior probability. Sex, diet and first principle component of kinship matrix were considered as additive covariate loci. Logarithmic p‐values are plotted against genome location. The red line represents the genome‐wide threshold (P < 0.05), and the blue line shows the suggestive threshold (P < 0.1) evaluated after 1000 permutations for histological pancreatitis score. (B) The scatter line plot shows LOD scores across chromosome 4 for three models (ie additive, interactive diet and sex). Use of either one of the interactive variables ('diet' or 'sex') considers the variability introduced by either of the variables, allowing to detect gene‐diet and gene‐sex interactions. The shaded region within the plot described confidence interval in Mb for each model (grey = AIP2, orange = genome‐wide and blue = chromosome‐wide). (C) The box plot shows ranked haplotype posterior probabilities (derived from happy R package using HMM) for Peak SNP (UNC7008858) across the four founder strains, when stratified for different AIP score. (D) The figure shows the fine‐mapped AIP2 loci (using UCSC browser) on chromosome 4 and genes within this loci. The figure also shows all the SNPs and Indels (derived from WGS) different between BxD2/TyJ and MRL/MpJ, as Peak SNP from these strains was negatively and positively correlated with AIP score in previous figure
Pancreatitis Score QTLs identified by fine mapping. Genome‐wide threshold for LOD (0.05), suggestive threshold (0.1). In addition, 6.8% or 0.46% of AIP phenotypic variance are explained by diet or sex, respectively
| Chr | CI (Mb) | Peak SNP | Peak Pos (Mb) | Pheno var % | LOD | Model | Significance |
|---|---|---|---|---|---|---|---|
| 4 | 31‐32.56 | UNC7008858 | 31.94 | 3.96 | 6.44 | Additive | Genome |
| 4 | 31.39‐34.8 | UNC7008858 | 31.94 | 4.70 | 7.68 | QTL x Diet | Genome |
| 4 | 135.55‐136.48 | UNC8290092 | 135.77 | 4.15 | 6.76 | QTL x Diet | Suggestive |
| 4 | 31‐36.12 | UNC7008858 | 31.94 | 4.23 | 6.89 | QTL x Sex | Suggestive |
Abbreviations: Chr, chromosome; CI, confidence interval; pheno var, phenotypic variability.
FIGURE 3MAP3K7 is expressed in the lymphocyte infiltrates of experimental autoimmune pancreatitis Pancreatic tissues from mice with AIP stage 0 (healthy) and stage 3 (severe AIP) were stained with anti‐MAP3K7. Arrows point to positively stained pancreatic islets and organ‐infiltrating mononuclear cells, respectively. The photographs are representative for n ≥ 5 mice per group