Literature DB >> 32627049

Importance of phase enhancement for machine learning classification of solid renal masses using texture analysis features at multi-phasic CT.

Nicola Schieda1, Kathleen Nguyen2, Rebecca E Thornhill2, Matthew D F McInnes2, Mark Wu2, Nick James3.   

Abstract

OBJECTIVE: To compare machine learning (ML) of texture analysis (TA) features for classification of solid renal masses on non-contrast-enhanced CT (NCCT), corticomedullary (CM) and nephrographic (NG) phase contrast-enhanced (CE) CT.
MATERIALS AND METHODS: With IRB approval, we retrospectively identified 177 consecutive solid renal masses (116 renal cell carcinoma [RCC]; 51 clear cell [cc], 40 papillary, 25 chromophobe and 61 benign tumors; 49 oncocytomas and 12 fat-poor angiomyolipomas) with renal protocol CT between 2012 and 2017. Tumors were independently segmented by two blinded radiologists. Twenty-five 2-dimensional TA features were extracted from each phase. Diagnostic accuracy for 1) RCC versus benign tumor and 2) cc-RCC versus other tumor was assessed using XGBoost.
RESULTS: ML of texture analysis features on different phases achieved mean area under the ROC curve (AUC [SD]), sensitivity/specificity for 1) RCC vs benign = 0.70(0.19), 96%/32% on CM-CECT and 0.71(0.14), 83%/58% on NG-CECT and; 2) cc-RCC vs other = 0.77(0.12), 49%/90% on CM-CECT and 0.71(0.16), 22%/94% on NG-CECT. There was no difference in AUC comparing CECT to NCCT (p = 0.058-0.54) and no improvement when combining data across all three phases compared single-phase assessment (p = 0.39-0.68) for either outcome. AUCs decreased when ML models were trained with one phase and tested on a different phase for both outcomes (RCC;p = 0.045-0.106, cc-RCC; < 0.001).
CONCLUSION: Accuracy of machine learning classification of renal masses using texture analysis features did not depend on phase; however, models trained using one phase performed worse when tested on another phase particularly when associating NCCT and CECT. These findings have implications for large registries which use varying CT protocols to study renal masses.

Entities:  

Keywords:  Computed tomography; Machine learning; Renal cell carcinoma; Texture analysis

Year:  2020        PMID: 32627049     DOI: 10.1007/s00261-020-02632-1

Source DB:  PubMed          Journal:  Abdom Radiol (NY)


  36 in total

1.  Radiogenomics of clear cell renal cell carcinoma: associations between CT imaging features and mutations.

Authors:  Christoph A Karlo; Pier Luigi Di Paolo; Joshua Chaim; A Ari Hakimi; Irina Ostrovnaya; Paul Russo; Hedvig Hricak; Robert Motzer; James J Hsieh; Oguz Akin
Journal:  Radiology       Date:  2013-10-28       Impact factor: 11.105

2.  Can Quantitative CT Texture Analysis be Used to Differentiate Fat-poor Renal Angiomyolipoma from Renal Cell Carcinoma on Unenhanced CT Images?

Authors:  Taryn Hodgdon; Matthew D F McInnes; Nicola Schieda; Trevor A Flood; Leslie Lamb; Rebecca E Thornhill
Journal:  Radiology       Date:  2015-04-23       Impact factor: 11.105

3.  Machine learning-based quantitative texture analysis of CT images of small renal masses: Differentiation of angiomyolipoma without visible fat from renal cell carcinoma.

Authors:  Zhichao Feng; Pengfei Rong; Peng Cao; Qingyu Zhou; Wenwei Zhu; Zhimin Yan; Qianyun Liu; Wei Wang
Journal:  Eur Radiol       Date:  2017-11-13       Impact factor: 5.315

4.  CT texture analysis of renal masses: pilot study using random forest classification for prediction of pathology.

Authors:  Siva P Raman; Yifei Chen; James L Schroeder; Peng Huang; Elliot K Fishman
Journal:  Acad Radiol       Date:  2014-09-16       Impact factor: 3.173

5.  Textural differences in apparent diffusion coefficient between low- and high-stage clear cell renal cell carcinoma.

Authors:  Andrea S Kierans; Henry Rusinek; Andrew Lee; Mohammed B Shaikh; Michael Triolo; William C Huang; Hersh Chandarana
Journal:  AJR Am J Roentgenol       Date:  2014-12       Impact factor: 3.959

6.  Radiogenomics in Clear Cell Renal Cell Carcinoma: Machine Learning-Based High-Dimensional Quantitative CT Texture Analysis in Predicting PBRM1 Mutation Status.

Authors:  Burak Kocak; Emine Sebnem Durmaz; Ece Ates; Melis Baykara Ulusan
Journal:  AJR Am J Roentgenol       Date:  2019-01-02       Impact factor: 3.959

7.  Diagnostic Accuracy of Unenhanced CT Analysis to Differentiate Low-Grade From High-Grade Chromophobe Renal Cell Carcinoma.

Authors:  Nicola Schieda; Robert S Lim; Satheesh Krishna; Matthew D F McInnes; Trevor A Flood; Rebecca E Thornhill
Journal:  AJR Am J Roentgenol       Date:  2018-03-16       Impact factor: 3.959

8.  Small (< 4 cm) Renal Mass: Differentiation of Oncocytoma From Renal Cell Carcinoma on Biphasic Contrast-Enhanced CT.

Authors:  Kohei Sasaguri; Naoki Takahashi; Daniel Gomez-Cardona; Shuai Leng; Grant D Schmit; Rickey E Carter; Bradley C Leibovich; Akira Kawashima
Journal:  AJR Am J Roentgenol       Date:  2015-11       Impact factor: 3.959

Review 9.  CT Texture Analysis: Definitions, Applications, Biologic Correlates, and Challenges.

Authors:  Meghan G Lubner; Andrew D Smith; Kumar Sandrasegaran; Dushyant V Sahani; Perry J Pickhardt
Journal:  Radiographics       Date:  2017 Sep-Oct       Impact factor: 5.333

10.  Differentiation of Papillary Renal Cell Carcinoma Subtypes on MRI: Qualitative and Texture Analysis.

Authors:  Camila Lopes Vendrami; Yuri S Velichko; Frank H Miller; Argha Chatterjee; Carolina Parada Villavicencio; Vahid Yaghmai; Robert J McCarthy
Journal:  AJR Am J Roentgenol       Date:  2018-09-21       Impact factor: 3.959

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