Literature DB >> 32624871

Lignocellulose degradation: An overview of fungi and fungal enzymes involved in lignocellulose degradation.

Martina Andlar1, Tonči Rezić1, Nenad Marđetko1, Daniel Kracher2, Roland Ludwig2, Božidar Šantek1.   

Abstract

This review aims to present current knowledge of the fungi involved in lignocellulose degradation with an overview of the various classes of lignocellulose-acting enzymes engaged in the pretreatment and saccharification step. Fungi have numerous applications and biotechnological potential for various industries including chemicals, fuel, pulp, and paper. The capability of fungi to degrade lignocellulose containing raw materials is due to their highly effective enzymatic system. Along with the hydrolytic enzymes consisting of cellulases and hemicellulases, responsible for polysaccharide degradation, they have a unique nonenzymatic oxidative system which together with ligninolytic enzymes is responsible for lignin modification and degradation. An overview of the enzymes classification is given by the Carbohydrate-Active enZymes (CAZy) database as the major database for the identification of the lignocellulolytic enzymes by their amino acid sequence similarity. Finally, the recently discovered novel class of recalcitrant polysaccharide degraders-lytic polysaccharide monooxygenases (LPMOs) are presented, because of these enzymes importance in the cellulose degradation process.
© 2018 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Biological pretreatment; Carbohydrate active enzymes; Fungi and fungal enzymes; Lignocellulose degradation; Plant cell wall

Year:  2018        PMID: 32624871      PMCID: PMC6999254          DOI: 10.1002/elsc.201800039

Source DB:  PubMed          Journal:  Eng Life Sci        ISSN: 1618-0240            Impact factor:   3.405


  62 in total

1.  Synergy between enzymes from Aspergillus involved in the degradation of plant cell wall polysaccharides.

Authors:  R P de Vries; H C Kester; C H Poulsen; J A Benen; J Visser
Journal:  Carbohydr Res       Date:  2000-08-07       Impact factor: 2.104

Review 2.  Lignocellulosic residues: biodegradation and bioconversion by fungi.

Authors:  Carmen Sánchez
Journal:  Biotechnol Adv       Date:  2008-11-24       Impact factor: 14.227

3.  Quinone redox cycling in the ligninolytic fungus Pleurotus eryngii leading to extracellular production of superoxide anion radical.

Authors:  F Guillén; M J Martínez; C Muñoz; A T Martínez
Journal:  Arch Biochem Biophys       Date:  1997-03-01       Impact factor: 4.013

4.  Fungal delignification of lignocellulosic biomass improves the saccharification of cellulosics.

Authors:  Rishi Gupta; Girija Mehta; Yogender Pal Khasa; Ramesh Chander Kuhad
Journal:  Biodegradation       Date:  2010-08-14       Impact factor: 3.909

5.  Lytic xylan oxidases from wood-decay fungi unlock biomass degradation.

Authors:  Marie Couturier; Simon Ladevèze; Gerlind Sulzenbacher; Luisa Ciano; Mathieu Fanuel; Céline Moreau; Ana Villares; Bernard Cathala; Florence Chaspoul; Kristian E Frandsen; Aurore Labourel; Isabelle Herpoël-Gimbert; Sacha Grisel; Mireille Haon; Nicolas Lenfant; Hélène Rogniaux; David Ropartz; Gideon J Davies; Marie-Noëlle Rosso; Paul H Walton; Bernard Henrissat; Jean-Guy Berrin
Journal:  Nat Chem Biol       Date:  2018-01-29       Impact factor: 15.040

6.  A calculation of all possible oligosaccharide isomers both branched and linear yields 1.05 x 10(12) structures for a reducing hexasaccharide: the Isomer Barrier to development of single-method saccharide sequencing or synthesis systems.

Authors:  R A Laine
Journal:  Glycobiology       Date:  1994-12       Impact factor: 4.313

7.  Substrate-specific transcription of the enigmatic GH61 family of the pathogenic white-rot fungus Heterobasidion irregulare during growth on lignocellulose.

Authors:  Igor Yakovlev; Gustav Vaaje-Kolstad; Ari M Hietala; Emil Stefańczyk; Halvor Solheim; Carl Gunnar Fossdal
Journal:  Appl Microbiol Biotechnol       Date:  2012-06-21       Impact factor: 4.813

8.  Discovery of the combined oxidative cleavage of plant xylan and cellulose by a new fungal polysaccharide monooxygenase.

Authors:  Matthias Frommhagen; Stefano Sforza; Adrie H Westphal; Jaap Visser; Sandra W A Hinz; Martijn J Koetsier; Willem J H van Berkel; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2015-07-17       Impact factor: 6.040

9.  Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes.

Authors:  Anthony Levasseur; Elodie Drula; Vincent Lombard; Pedro M Coutinho; Bernard Henrissat
Journal:  Biotechnol Biofuels       Date:  2013-03-21       Impact factor: 6.040

10.  A fast and sensitive activity assay for lytic polysaccharide monooxygenase.

Authors:  Erik Breslmayr; Marija Hanžek; Aoife Hanrahan; Christian Leitner; Roman Kittl; Božidar Šantek; Chris Oostenbrink; Roland Ludwig
Journal:  Biotechnol Biofuels       Date:  2018-03-23       Impact factor: 7.670

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  39 in total

1.  Genetic response to nitrogen starvation in the aggressive Eucalyptus foliar pathogen Teratosphaeria destructans.

Authors:  Minette Havenga; Brenda D Wingfield; Michael J Wingfield; Léanne L Dreyer; Francois Roets; Janneke Aylward
Journal:  Curr Genet       Date:  2021-08-25       Impact factor: 3.886

2.  Unveiling lignocellulolytic trait of a goat omasum inhabitant Klebsiella variicola strain HSTU-AAM51 in light of biochemical and genome analyses.

Authors:  Md Shohorab Hossain; Gautam Chandra Debnath; Sharmin Sultana; Aminur Rahman; Zoherul Hasan; Snygdha Rani Das; Md Ashikujjaman Ashik; Md Yeasin Prodhan; Shefali Aktar; Kye Man Cho; Md Azizul Haque
Journal:  Braz J Microbiol       Date:  2022-01-28       Impact factor: 2.476

Review 3.  Leveraging multiomics approaches for producing lignocellulose degrading enzymes.

Authors:  Kavya Dashora; Meghana Gattupalli; Zoya Javed; Gyan Datta Tripathi; Ruchi Sharma; Mansi Mishra; Atul Bhargava; Shilpi Srivastava
Journal:  Cell Mol Life Sci       Date:  2022-02-13       Impact factor: 9.261

4.  Lessons From Insect Fungiculture: From Microbial Ecology to Plastics Degradation.

Authors:  Mariana O Barcoto; Andre Rodrigues
Journal:  Front Microbiol       Date:  2022-05-24       Impact factor: 6.064

5.  Isolation and characterization of wood-decomposing basidiomycetes from the Andean Forest in Boyacá, Colombia.

Authors:  Zilpa Adriana Sánchez-Quitian; Juan Carlos Quitian-Romero; Angie Tatiana Moreno-Buitrago; Sandra Montoya Barreto; Tatiana Sanjuan; Juan Pablo Ortiz-Rosas
Journal:  Braz J Microbiol       Date:  2022-04-21       Impact factor: 2.214

6.  Multi-omics analysis provides insights into lignocellulosic biomass degradation by Laetiporus sulphureus ATCC 52600.

Authors:  Fernanda Lopes de Figueiredo; Ana Carolina Piva de Oliveira; Cesar Rafael Fanchini Terrasan; Thiago Augusto Gonçalves; Jaqueline Aline Gerhardt; Geizecler Tomazetto; Gabriela Felix Persinoti; Marcelo Ventura Rubio; Jennifer Andrea Tamayo Peña; Michelle Fernandes Araújo; Maria Augusta de Carvalho Silvello; Telma Teixeira Franco; Sarita Cândida Rabelo; Rosana Goldbeck; Fabio Marcio Squina; André Damasio
Journal:  Biotechnol Biofuels       Date:  2021-04-17       Impact factor: 6.040

7.  Peroxidase-producing actinobacteria from Algerian environments and insights from the genome sequence of peroxidase-producing Streptomyces sp. S19.

Authors:  Rima Maibeche; Nawel Boucherba; Kamel Bendjeddou; Alaric Prins; Cilia Bouiche; Samir Hamma; Mohammed Benhoula; Zahra Azzouz; Azzeddine Bettache; Said Benallaoua; Marilize Le Roes-Hill
Journal:  Int Microbiol       Date:  2022-01-20       Impact factor: 2.479

Review 8.  Cost-effective production of biocatalysts using inexpensive plant biomass: a review.

Authors:  Deepak Sakhuja; Hemant Ghai; Ranju Kumari Rathour; Pradeep Kumar; Arvind Kumar Bhatt; Ravi Kant Bhatia
Journal:  3 Biotech       Date:  2021-05-20       Impact factor: 2.893

Review 9.  Consolidated Bioprocessing: Synthetic Biology Routes to Fuels and Fine Chemicals.

Authors:  Alec Banner; Helen S Toogood; Nigel S Scrutton
Journal:  Microorganisms       Date:  2021-05-18

Review 10.  Nanocellulose Production: Exploring the Enzymatic Route and Residues of Pulp and Paper Industry.

Authors:  Michele Michelin; Daniel G Gomes; Aloia Romaní; Maria de Lourdes T M Polizeli; José A Teixeira
Journal:  Molecules       Date:  2020-07-28       Impact factor: 4.411

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