Literature DB >> 32624743

A scalable software framework for data integration in bioprocess development.

Ingrid Schmid1, Joachim Aschoff1.   

Abstract

Effectiveness in lab workflows-despite progresses made in automation and lab informatics-is often hindered by insufficient integration of devices and data. The iLAB software framework, a middleware connecting and integrating devices and data, provides a plugin architecture that can be adapted to individual lab environments. Integration of devices is preferably based on standardized data and communication protocols. In addition to device integration, process data and result data from different sources (e.g. readers) are converted to a standard format and administered by a powerful database for further processing. In this paper, the use of iLAB in a bioprocess development application is described. Process parameters and measured values of two high-throughput bioreactor systems (96-well plates and 10 mL reactor vessels) are collected in the iLAB database. Data from screening experiments and offline data are visualized, analyzed, and compared. A filter algorithm allows searching for matching parameters in experiments as well as the comparison of correlated datasets, independently from the used bioreactor system. The database model enables the consolidation of data, the transition from data to information, and a solid base for management decisions on enterprise level.
© 2016 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  Bioprocess optimization; Data integration; Device integration; Middleware; SiLA

Year:  2016        PMID: 32624743      PMCID: PMC6999508          DOI: 10.1002/elsc.201600008

Source DB:  PubMed          Journal:  Eng Life Sci        ISSN: 1618-0240            Impact factor:   2.678


  3 in total

1.  Human-Device Interaction in the Life Science Laboratory.

Authors:  Robert Söldner; Sophia Rheinländer; Tim Meyer; Michael Olszowy; Jonas Austerjost
Journal:  Adv Biochem Eng Biotechnol       Date:  2022       Impact factor: 2.768

2.  Implementing a digital infrastructure for the lab using a central laboratory server and the SiLA2 communication standard.

Authors:  Marc Porr; Ferdinand Lange; Daniel Marquard; Laura Niemeyer; Patrick Lindner; Thomas Scheper; Sascha Beutel
Journal:  Eng Life Sci       Date:  2020-12-09       Impact factor: 2.678

3.  Bringing IoT to the Lab: SiLA2 and Open-Source-Powered Gateway Module for Integrating Legacy Devices into the Digital Laboratory.

Authors:  Marc Porr; Sebastian Schwarz; Ferdinand Lange; Laura Niemeyer; Thorleif Hentrop; Daniel Marquard; Patrick Lindner; Thomas Scheper; Sascha Beutel
Journal:  HardwareX       Date:  2020-06-21
  3 in total

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