Literature DB >> 32621057

The use of SARS-CoV-2-related coronaviruses from bats and pangolins to polarize mutations in SARS-Cov-2.

Tao Li1,2, Xiaolu Tang3, Changcheng Wu3, Xinmin Yao3, Yirong Wang3, Xuemei Lu4,5, Jian Lu6.   

Abstract

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Year:  2020        PMID： 32621057      PMCID： PMC7332740          DOI： 10.1007/s11427-020-1764-2

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN： 1674-7305            Impact factor:   6.038


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  14 in total

1.  Context dependence, ancestral misidentification, and spurious signatures of natural selection.

Authors:  Ryan D Hernandez; Scott H Williamson; Carlos D Bustamante
Journal:  Mol Biol Evol       Date:  2007-06-01       Impact factor: 16.240

2.  Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins.

Authors:  Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Marcus Ho-Hin Shum; Jia-Fu Jiang; Yi-Gang Tong; Hua-Chen Zhu; Yong-Xia Shi; Xue-Bing Ni; Yun-Shi Liao; Wen-Juan Li; Bao-Gui Jiang; Wei Wei; Ting-Ting Yuan; Kui Zheng; Xiao-Ming Cui; Jie Li; Guang-Qian Pei; Xin Qiang; William Yiu-Man Cheung; Lian-Feng Li; Fang-Fang Sun; Si Qin; Ji-Cheng Huang; Gabriel M Leung; Edward C Holmes; Yan-Ling Hu; Yi Guan; Wu-Chun Cao
Journal:  Nature       Date:  2020-03-26       Impact factor: 49.962

3.  A pneumonia outbreak associated with a new coronavirus of probable bat origin.

Authors:  Peng Zhou; Xing-Lou Yang; Xian-Guang Wang; Ben Hu; Lei Zhang; Wei Zhang; Hao-Rui Si; Yan Zhu; Bei Li; Chao-Lin Huang; Hui-Dong Chen; Jing Chen; Yun Luo; Hua Guo; Ren-Di Jiang; Mei-Qin Liu; Ying Chen; Xu-Rui Shen; Xi Wang; Xiao-Shuang Zheng; Kai Zhao; Quan-Jiao Chen; Fei Deng; Lin-Lin Liu; Bing Yan; Fa-Xian Zhan; Yan-Yi Wang; Geng-Fu Xiao; Zheng-Li Shi
Journal:  Nature       Date:  2020-02-03       Impact factor: 69.504

4.  Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding.

Authors:  Roujian Lu; Xiang Zhao; Juan Li; Peihua Niu; Bo Yang; Honglong Wu; Wenling Wang; Hao Song; Baoying Huang; Na Zhu; Yuhai Bi; Xuejun Ma; Faxian Zhan; Liang Wang; Tao Hu; Hong Zhou; Zhenhong Hu; Weimin Zhou; Li Zhao; Jing Chen; Yao Meng; Ji Wang; Yang Lin; Jianying Yuan; Zhihao Xie; Jinmin Ma; William J Liu; Dayan Wang; Wenbo Xu; Edward C Holmes; George F Gao; Guizhen Wu; Weijun Chen; Weifeng Shi; Wenjie Tan
Journal:  Lancet       Date:  2020-01-30       Impact factor: 79.321

5.  Decoding the evolution and transmissions of the novel pneumonia coronavirus (SARS-CoV-2 / HCoV-19) using whole genomic data.

Authors:  Wen-Bin Yu; Guang-Da Tang; Li Zhang; Richard T Corlett
Journal:  Zool Res       Date:  2020-05-18

6.  Synonymous mutations and the molecular evolution of SARS-CoV-2 origins.

Authors:  Hongru Wang; Lenore Pipes; Rasmus Nielsen
Journal:  Virus Evol       Date:  2020-12-30

7.  Inferring the Probability of the Derived vs. the Ancestral Allelic State at a Polymorphic Site.

Authors:  Peter D Keightley; Benjamin C Jackson
Journal:  Genetics       Date:  2018-05-16       Impact factor: 4.562

8.  Viral Metagenomics Revealed Sendai Virus and Coronavirus Infection of Malayan Pangolins (Manis javanica).

Authors:  Ping Liu; Wu Chen; Jin-Ping Chen
Journal:  Viruses       Date:  2019-10-24       Impact factor: 5.048

9.  A Genomic Perspective on the Origin and Emergence of SARS-CoV-2.

Authors:  Yong-Zhen Zhang; Edward C Holmes
Journal:  Cell       Date:  2020-03-26       Impact factor: 41.582
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  6 in total

Review 1.  Evolutionary dynamics of the severe acute respiratory syndrome coronavirus 2 genomes.

Authors:  Zhaohui Qian; Pei Li; Xiaolu Tang; Jian Lu
Journal:  Med Rev (Berl)       Date:  2022-03-01

2.  Evolutionary analysis and lineage designation of SARS-CoV-2 genomes.

Authors:  Xiaolu Tang; Ruochen Ying; Xinmin Yao; Guanghao Li; Changcheng Wu; Yiyuli Tang; Zhida Li; Bishan Kuang; Feng Wu; Changsheng Chi; Xiaoman Du; Yi Qin; Shenghan Gao; Songnian Hu; Juncai Ma; Tiangang Liu; Xinghuo Pang; Jianwei Wang; Guoping Zhao; Wenjie Tan; Yaping Zhang; Xuemei Lu; Jian Lu
Journal:  Sci Bull (Beijing)       Date:  2021-02-06       Impact factor: 11.780

Review 3.  Gut microbiota in antiviral strategy from bats to humans: a missing link in COVID-19.

Authors:  Jia Luo; Shan Liang; Feng Jin
Journal:  Sci China Life Sci       Date:  2021-01-27       Impact factor: 10.372

4.  The high diversity of SARS-CoV-2-related coronaviruses in pangolins alerts potential ecological risks.

Authors:  Min-Sheng Peng; Jian-Bo Li; Zheng-Fei Cai; Hang Liu; Xiaolu Tang; Ruochen Ying; Jia-Nan Zhang; Jia-Jun Tao; Ting-Ting Yin; Tao Zhang; Jing-Yang Hu; Ru-Nian Wu; Zhong-Yin Zhou; Zhi-Gang Zhang; Li Yu; Yong-Gang Yao; Zheng-Li Shi; Xue-Mei Lu; Jian Lu; Ya-Ping Zhang
Journal:  Zool Res       Date:  2021-11-18

5.  First COVID-19 lockdown resulted in most respiratory viruses disappearing among hospitalised children, with the exception of rhinoviruses.

Authors:  Raffaella Nenna; Luigi Matera; Alessandra Pierangeli; Giuseppe Oliveto; Agnese Viscido; Laura Petrarca; Domenico Paolo La Regina; Enrica Mancino; Greta Di Mattia; Alberto Villani; Fabio Midulla
Journal:  Acta Paediatr       Date:  2022-03-16       Impact factor: 4.056

6.  Potential transmission chains of variant B.1.1.7 and co-mutations of SARS-CoV-2.

Authors:  Jingsong Zhang; Yang Zhang; Jun-Yan Kang; Shuiye Chen; Yongqun He; Benhao Han; Mo-Fang Liu; Lina Lu; Li Li; Zhigang Yi; Luonan Chen
Journal:  Cell Discov       Date:  2021-06-15       Impact factor: 10.849
  6 in total

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