Literature DB >> 32608331

Development of triple mutant T790M/C797S allosteric EGFR inhibitors: a computational approach.

Kshipra S Karnik1, Aniket P Sarkate1, Deepak K Lokwani2, Ishudeep S Narula1, Prasad V L S Burra3, Pravin S Wakte1.   

Abstract

The mutations concerned with non-small cell lung cancer involving epidermal growth factor receptor of tyrosine kinase family have primarily targeted. EGFR inhibitors binding allosterically to C797S mutant EGFR enzyme have been developed. Here, database building, library screening performing R-group enumeration and scaffold hopping technique for increasing the EGFR binding affinity of compounds have been carried out. Virtual screening was performed subjecting to HTVS, SP and XP docking protocol along with its relative binding free energy calculations. Molecular docking studies provided the information about binding pockets and interactions of molecules on mutant (PDB: 5D41) as well as wild type (PDB: 4I23) EGFR enzyme. This was supported with ADMET and molecular simulation studies. On the basis of glide score and protein-ligand interactions, highest scoring molecule was selected for molecular dynamic simulation providing a complete insight into the conformational stability. The virtually screened molecules can act as potential EGFR inhibitors in the management of drug resistance. Communicated by Ramaswamy H. Sarma.

Entities:  

Keywords:  EGFR; Non-small cell lung cancer; allosteric; library generation; molecular docking; molecular dynamics simulations; virtual screening

Year:  2020        PMID: 32608331     DOI: 10.1080/07391102.2020.1786460

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  1 in total

Review 1.  Target-Based Small Molecule Drug Discovery for Colorectal Cancer: A Review of Molecular Pathways and In Silico Studies.

Authors:  Said Moshawih; Ai Fern Lim; Chrismawan Ardianto; Khang Wen Goh; Nurolaini Kifli; Hui Poh Goh; Qais Jarrar; Long Chiau Ming
Journal:  Biomolecules       Date:  2022-06-23
  1 in total

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