Literature DB >> 32597628

Identifying the Target of an Antiparasitic Compound in Toxoplasma Using Thermal Proteome Profiling.

Alice L Herneisen1,2, Saima M Sidik2, Benedikt M Markus2,3, David H Drewry4,5, William J Zuercher4, Sebastian Lourido1,2.   

Abstract

Apicomplexan parasites include the causative agents of malaria and toxoplasmosis. Cell-based screens in Toxoplasma previously identified a chemical modulator of calcium signaling (ENH1) that blocked parasite egress from host cells and exhibited potent antiparasitic activity. To identify the targets of ENH1, we adapted thermal proteome profiling to Toxoplasma, which revealed calcium-dependent protein kinase 1 (CDPK1) as a target. We confirmed the inhibition of CDPK1 by ENH1 in vitro and in parasites by comparing alleles sensitive or resistant to ENH1. CDPK1 inhibition explained the block in egress; however, the effects of ENH1 on calcium homeostasis and parasite viability were CDPK1-independent, implicating additional targets. Thermal proteome profiling of lysates from parasites expressing the resistant allele of CDPK1 identified additional candidates associated with the mitochondria and the parasite pellicle-compartments that potentially function in calcium release and homeostasis. Our findings illustrate the promise of thermal profiling to identify druggable targets that modulate calcium signaling in apicomplexan parasites.

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Year:  2020        PMID: 32597628      PMCID: PMC7585386          DOI: 10.1021/acschembio.0c00369

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  34 in total

1.  Allosteric activation of apicomplexan calcium-dependent protein kinases.

Authors:  Jessica R Ingram; Kevin E Knockenhauer; Benedikt M Markus; Joseph Mandelbaum; Alexander Ramek; Yibing Shan; David E Shaw; Thomas U Schwartz; Hidde L Ploegh; Sebastian Lourido
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

2.  Analysis of Ca2+ mediated signaling regulating Toxoplasma infectivity reveals complex relationships between key molecules.

Authors:  Rebecca J Stewart; Lachlan Whitehead; Brunda Nijagal; Brad E Sleebs; Guillaume Lessene; Malcolm J McConville; Kelly L Rogers; Christopher J Tonkin
Journal:  Cell Microbiol       Date:  2017-01-09       Impact factor: 3.715

3.  Structures of apicomplexan calcium-dependent protein kinases reveal mechanism of activation by calcium.

Authors:  Amy K Wernimont; Jennifer D Artz; Patrick Finerty; Yu-Hui Lin; Mehrnaz Amani; Abdellah Allali-Hassani; Guillermo Senisterra; Masoud Vedadi; Wolfram Tempel; Farrell Mackenzie; Irene Chau; Sebastian Lourido; L David Sibley; Raymond Hui
Journal:  Nat Struct Mol Biol       Date:  2010-05-02       Impact factor: 15.369

4.  Tracking cancer drugs in living cells by thermal profiling of the proteome.

Authors:  Mikhail M Savitski; Friedrich B M Reinhard; Holger Franken; Thilo Werner; Maria Fälth Savitski; Dirk Eberhard; Daniel Martinez Molina; Rozbeh Jafari; Rebecca Bakszt Dovega; Susan Klaeger; Bernhard Kuster; Pär Nordlund; Marcus Bantscheff; Gerard Drewes
Journal:  Science       Date:  2014-10-02       Impact factor: 47.728

Review 5.  Gliding motility powers invasion and egress in Apicomplexa.

Authors:  Karine Frénal; Jean-François Dubremetz; Maryse Lebrun; Dominique Soldati-Favre
Journal:  Nat Rev Microbiol       Date:  2017-09-04       Impact factor: 60.633

6.  Plasmodium chaperonin TRiC/CCT identified as a target of the antihistamine clemastine using parallel chemoproteomic strategy.

Authors:  Kuan-Yi Lu; Baiyi Quan; Kayla Sylvester; Tamanna Srivastava; Michael C Fitzgerald; Emily R Derbyshire
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-03       Impact factor: 11.205

7.  Cortical alveoli of Paramecium: a vast submembranous calcium storage compartment.

Authors:  N Stelly; J P Mauger; M Claret; A Adoutte
Journal:  J Cell Biol       Date:  1991-04       Impact factor: 10.539

8.  Optimizing Systems for Cas9 Expression in Toxoplasma gondii.

Authors:  Benedikt M Markus; George W Bell; Hernan A Lorenzi; Sebastian Lourido
Journal:  mSphere       Date:  2019-06-26       Impact factor: 4.389

9.  Using a Genetically Encoded Sensor to Identify Inhibitors of Toxoplasma gondii Ca2+ Signaling.

Authors:  Saima M Sidik; Miryam A Hortua Triana; Aditya S Paul; Majida El Bakkouri; Caroline G Hackett; Fanny Tran; Nicholas J Westwood; Raymond Hui; William J Zuercher; Manoj T Duraisingh; Silvia N J Moreno; Sebastian Lourido
Journal:  J Biol Chem       Date:  2016-03-01       Impact factor: 5.157

10.  Nonparametric Analysis of Thermal Proteome Profiles Reveals Novel Drug-binding Proteins.

Authors:  Dorothee Childs; Karsten Bach; Holger Franken; Simon Anders; Nils Kurzawa; Marcus Bantscheff; Mikhail M Savitski; Wolfgang Huber
Journal:  Mol Cell Proteomics       Date:  2019-10-03       Impact factor: 5.911

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  9 in total

Review 1.  Host cell proteins modulated upon Toxoplasma infection identified using proteomic approaches: a molecular rationale.

Authors:  Sajad Rashidi; Carmen Vieira; Reza Mansouri; Mohammad Ali-Hassanzadeh; Esmaeel Ghani; Mohammadreza Karimazar; Paul Nguewa; Raúl Manzano-Román
Journal:  Parasitol Res       Date:  2022-05-13       Impact factor: 2.289

2.  Temporal and thermal profiling of the Toxoplasma proteome implicates parasite Protein Phosphatase 1 in the regulation of Ca2+-responsive pathways.

Authors:  Alice L Herneisen; Zhu-Hong Li; Alex W Chan; Silvia N J Moreno; Sebastian Lourido
Journal:  Elife       Date:  2022-08-17       Impact factor: 8.713

3.  Thermal Proteome Profiling to Identify Protein-ligand Interactions in the Apicomplexan Parasite Toxoplasma gondii.

Authors:  Alice L Herneisen; Sebastian Lourido
Journal:  Bio Protoc       Date:  2021-11-05

4.  Metalloprotease Gp63-Targeting Novel Glycoside Exhibits Potential Antileishmanial Activity.

Authors:  Amrita Chakrabarti; Chintam Narayana; Nishant Joshi; Swati Garg; Lalit C Garg; Anand Ranganathan; Ram Sagar; Soumya Pati; Shailja Singh
Journal:  Front Cell Infect Microbiol       Date:  2022-05-04       Impact factor: 6.073

Review 5.  Chemoproteomics for Plasmodium Parasite Drug Target Discovery.

Authors:  Kuan-Yi Lu; Christopher R Mansfield; Michael C Fitzgerald; Emily R Derbyshire
Journal:  Chembiochem       Date:  2021-06-10       Impact factor: 3.461

Review 6.  Elucidating the Mechanisms of Action of Antimicrobial Agents.

Authors:  M Ashley Hudson; Steve W Lockless
Journal:  mBio       Date:  2022-04-18       Impact factor: 7.786

7.  Preclinical characterization and target validation of the antimalarial pantothenamide MMV693183.

Authors:  Taco W A Kooij; Koen J Dechering; Laura E de Vries; Patrick A M Jansen; Catalina Barcelo; Justin Munro; Julie M J Verhoef; Charisse Flerida A Pasaje; Kelly Rubiano; Josefine Striepen; Nada Abla; Luuk Berning; Judith M Bolscher; Claudia Demarta-Gatsi; Rob W M Henderson; Tonnie Huijs; Karin M J Koolen; Patrick K Tumwebaze; Tomas Yeo; Anna C C Aguiar; Iñigo Angulo-Barturen; Alisje Churchyard; Jake Baum; Benigno Crespo Fernández; Aline Fuchs; Francisco-Javier Gamo; Rafael V C Guido; María Belén Jiménez-Diaz; Dhelio B Pereira; Rosemary Rochford; Camille Roesch; Laura M Sanz; Graham Trevitt; Benoit Witkowski; Sergio Wittlin; Roland A Cooper; Philip J Rosenthal; Robert W Sauerwein; Joost Schalkwijk; Pedro H H Hermkens; Roger V Bonnert; Brice Campo; David A Fidock; Manuel Llinás; Jacquin C Niles
Journal:  Nat Commun       Date:  2022-04-20       Impact factor: 17.694

8.  High-throughput small molecule screen identifies inhibitors of microsporidia invasion and proliferation in C. elegans.

Authors:  Brandon M Murareanu; Noelle V Antao; Winnie Zhao; Aurore Dubuffet; Hicham El Alaoui; Jessica Knox; Damian C Ekiert; Gira Bhabha; Peter J Roy; Aaron W Reinke
Journal:  Nat Commun       Date:  2022-09-26       Impact factor: 17.694

9.  Genetic screens reveal a central role for heme metabolism in artemisinin susceptibility.

Authors:  Clare R Harding; Saima M Sidik; Boryana Petrova; Nina F Gnädig; John Okombo; Alice L Herneisen; Kurt E Ward; Benedikt M Markus; Elizabeth A Boydston; David A Fidock; Sebastian Lourido
Journal:  Nat Commun       Date:  2020-09-23       Impact factor: 14.919

  9 in total

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