Amirhossein Bayani1, Karin Larsson1. 1. Department of Chemistry-Ångström Laboratory, Uppsala University, Uppsala 752 37, Sweden.
Abstract
The process of Au intercalation into a SiC/buffer interface has been theoretically investigated here by using density functional theory (DFT) and the nudged elastic band (NEB) method. Energy barriers were at first calculated (using NEB) for the transfer of an Au atom through a free-standing graphene sheet. The graphene sheet was either of a nondefect character or with a defect in the form of an enlarged hexagonal carbon ring. Defects in the form of single and double vacancies were also considered. Besides giving a qualitative prediction of the relative energy barriers for the corresponding SiC/buffer interfaces, some of the graphene calculations also proved evidence of energy minima close to the graphene sheet. The most stable Au positions within the SiC/buffer interface were, therefore, calculated by performing geometry optimization with Au in the vicinity of the buffer layer. Based on these NEB and DFT calculations, two factors were observed to have a great influence on the Au intercalation process: (i) energy barrier and (ii) preferential bonding of Au to the radical C atoms at the edges of the vacancies. The energy barriers were considerably smaller in the presence of vacancies. However, the Au atoms preferred to bind to the edge atoms of these vacancies when approaching the buffer layer. It can thereby be concluded that the Au intercalation will only occur for a nondefect buffer layer when using high temperature and/or by using high-energy impacts by Au atoms. For this type of Au intercalation, the buffer layer will become completely detached from the SiC surface, forming a single layer of graphene with an intact Dirac point.
The process of Au intercalation into a SiC/buffer interface has been theoretically investigated here by using density functional theory (DFT) and the nudged elastic band (NEB) method. Energy barriers were at first calculated (using NEB) for the transfer of an Au atom through a free-standing graphene sheet. The graphene sheet was either of a nondefect character or with a defect in the form of an enlarged hexagonal carbon ring. Defects in the form of single and double vacancies were also considered. Besides giving a qualitative prediction of the relative energy barriers for the corresponding SiC/buffer interfaces, some of the graphene calculations also proved evidence of energy minima close to the graphene sheet. The most stable Au positions within the SiC/buffer interface were, therefore, calculated by performing geometry optimization with Au in the vicinity of the buffer layer. Based on these NEB and DFT calculations, two factors were observed to have a great influence on the Au intercalation process: (i) energy barrier and (ii) preferential bonding of Au to the radical C atoms at the edges of the vacancies. The energy barriers were considerably smaller in the presence of vacancies. However, the Au atoms preferred to bind to the edge atoms of these vacancies when approaching the buffer layer. It can thereby be concluded that the Au intercalation will only occur for a nondefect buffer layer when using high temperature and/or by using high-energy impacts by Au atoms. For this type of Au intercalation, the buffer layer will become completely detached from the SiC surface, forming a single layer of graphene with an intact Dirac point.
Large-scale production
of graphene is very challenging for various
types of industrial applications. Intercalation methods based on thermal
annealing have been shown to be a promising way to produce graphene
sheets in large sizes.[1−3] It has been experimentally shown that intercalation
with different types of elements (such as H,[4] Li,[5] Ge,[6] F,[7] Au,[8] Pt,[9] and Cu[10]), followed
by thermal annealing, is a suitable way to fabricate high-quality
single-layer graphene on SiC substrates.Different theoretical
studies have focused on the mechanism of
intercalation with either Li[11] or Cu,[12] into the SiC/buffer interface. It has been shown
that the intercalation will take place through defects in the buffer
layer. However, to the best of our knowledge, the mechanism of intercalation
with Au atoms has not yet been theoretically addressed. Also, previous
theoretical studies have only dealt with the energy barrier in the
atom intercalation process. However, the complete optimization of
the geometrical interface structure (especially after the intercalation
process) still needs to be addressed.In the present study,
the intercalation of Au atoms into the interface
between a buffer layer and the underlying SiC(0001) substrate has
been theoretically considered. In order to estimate the energy barrier
for the Au intercalation process, the climbing image nudged elastic
band (NEB) has been used in combination with a density functional
theory (DFT) method. The preferred position of the intercalated Au
atom, in addition to the corresponding bond situation, was obtained
by using DFT calculations. The electronic structure of the buffer
layer (in the SiC/buffer systems) was also calculated by using a DFT
method. For the buffer layer, the influence by various types of defects
was especially considered. These defects include single and double
vacancies, as well as an enlarged hexagonal C ring. The purpose was
to study and gain knowledge about the influence of these defects on
(i) the energy barrier of the Au intercalation process and on (ii)
the eventual interactions between Au and the buffer layer C atoms.
Results
and Discussions
Au Intercalation through a Buffer Layer
Calculation
of the Energy Barriers for a Free-Standing Graphene
Sheet
For the Au intercalation process, through the carbon
buffer layer and into the SiC(0001)/buffer interface, different types
of buffer layers have been considered in the present study (a defect-free
buffer layer and layers with single or double vacancies). In addition,
a buffer layer with an enlarged hexagonal C ring was also studied.
However, it was not possible to do NEB calculations on the very large
SiC(0001)/buffer system. Instead, they had to be done for a free-standing
graphene sheet instead. As a result, it was only possible to get qualitative
information about the barrier energies, instead of quantitative. One
Au atom was then initially positioned 5 Å above the graphene
sheet (in the center of a hexagonal ring or a vacancy). With two exceptions,
total energies were thereafter calculated for the Au penetration through
the graphene sheet (to a final position of 5 Å below the sheet).
Increments of 0.5 Å were used in these NEB calculations. Moreover,
the initial and final steps were optimized to achieve the most accurate
results. As can be seen in Figure a, the calculated energy barrier for a defect-free
graphene sheet is extremely large (56.1 eV). Hence, there is, without
the addition of extra energy, a very small probability for Au intercalation
through a nondefect graphene sheet. A visualization of this specific
type of Au penetration is shown in Figure b. This figure also demonstrates how the
neighboring carbon atoms (around the intercalating position on the
graphene sheet) are being influenced by the Au intercalation in the
out-plane direction of the graphene sheet (z-direction).
Figure 1
(a) Energy
barriers for Au intercalation through different types
of free-standing graphene sheets; nondefect graphene (black), graphene
with single (blue) and double (green) vacancies, and graphene with
an enlarged hexagonal (red) vacancy. The intersection figure shows
the van der Waals interaction between Au and the defect-free graphene
sheet. (b) Schematic showing the Au penetration through a nondefect
graphene sheet. The most affected carbon atoms are highlighted in
dark gray. (c) Models of graphene sheets with a of SV, DV, and an
enlarged carbon ring (BR).
(a) Energy
barriers for Au intercalation through different types
of free-standing graphene sheets; nondefect graphene (black), graphene
with single (blue) and double (green) vacancies, and graphene with
an enlarged hexagonal (red) vacancy. The intersection figure shows
the van der Waals interaction between Au and the defect-free graphene
sheet. (b) Schematic showing the Au penetration through a nondefect
graphene sheet. The most affected carbon atoms are highlighted in
dark gray. (c) Models of graphene sheets with a of SV, DV, and an
enlarged carbon ring (BR).Hence, it is obvious that a larger supercell must be considered
in order to obtain more accurate values of the energy barriers. All
C atoms in graphene will, otherwise, move during the process of penetration,
which is not the favorable pathway in real systems with just a few
metal atoms penetrating the buffer layer simultaneously. A large enough
supercell will permit the formation of a local nucleation process
that occurs in either the initial or final stage of the intercalation.
After the initial nucleation, the intercalating material will propagate
across the supercell.[13] It is also important
to mention that during Au penetration through the defect-free graphene
sheet (black line in Figure ), van der Waals interactions do take place. However, this
type of interaction is very weak and can only be observed for an energy
range of −0.5 to 1 eV (in Figure a).As the next step in the investigation,
single and double vacancies
were considered by removing one and two carbon atoms, respectively,
from the center of the graphene sheet (see Figure c). For these models, the Au penetrations
were assumed to take place exactly at the positions of the vacancies.
For the graphene sheet with a single vacancy (SV), an energy minimum
(at −3.98 eV) was observed at a graphene–Au distance
of 1.5 Å, followed by an energy maximum (of 10.7 eV) at the Au
interception with graphene (see Figure a). From this result, it is possible to conclude that
the Au atom prefers to bind to graphene SV, with a chemisorption energy
of 2.94 eV (283.66 kJ/mol) and at a distance of 1.5 Å from the
graphene sheet (at low temperatures and/or low Au impact energies).
Moreover, an energy maximum of 10.7 eV was found to be 5 times smaller
than that of a graphene sheet with no defects. On the contrary, a
complete lack of energy maximum was observed when studying a graphene
sheet with double vacancy (DV). Instead, an energy minimum of −8.0
eV was found at the interception with the graphene sheet. Hence, for
this type of defect, the Au atom prefers to be chemically captured
within the graphene sheet.[14]The
penetration by Au has also been studied for a graphene sheet
where one of the six-membered rings has been enlarged (with C–C
distances equal to 1.9 Å; see Figure c). The resulting barrier energy decreased
to 4.5 eV (with respect to the result for a nonperturbed defect-free
graphene sheet). Moreover, a tendency for energy minima was also observed
in the vicinity of the graphene sheet.
Calculation of Stable Geometrical
Structures of SiC/Buffer-Au
Systems
The interaction between Au and the SiC/buffer interface
was also studied in the present work. In the construction of the supercell
model, a 4 × 4 graphene sheet (i.e., with 4 × 4 unit cell
size) was initially positioned on top of the Si surface of SiC(0001),
with a matching of with
respect to the SiC structure. As was
the situation with a free-standing graphene sheet, this attached graphene
layer was either defect-free or had a single (or double) vacancy.
The situation with an enlarged hexagonal C ring was also here considered.
These SiC(0001)/graphene systems were thereafter geometry optimized,
whereby corresponding SiC(0001)/buffer systems were obtained. For
each of these systems, the next step was to position one Au atom above
the center of the hexagonal ring or the vacancy of the buffer layer.
Geometry optimizations were, thereafter, performed but with fixed
Au positions at 0.5, 0.1, 0, −0.1, and −0.2 Å with
respect to the buffer layers. The positive and negative values correspond
to Au positions above and under the buffer layer, respectively. Moreover,
zero indicates the interception with the buffer layer. The purpose
with these calculations was to more accurately calculate the most
stable geometrical structures (i) at the point of the interception,
as well as (ii) just before and (iii) after penetration through the
buffer layers. The idea behind these calculations comes from the presented
potential energy curves in Figure a (for nondefect and defect graphene sheets).The possibility for intercalation through a defect-free buffer layer
was at first studied. The calculations showed that the intercalation
cannot take place for this type of the nonperturbed buffer layer structure
(i.e., without the addition of extra energy). In fact, when starting
the geometry optimization from an Au position 0.5 or 0.1 Å above
the buffer layer, the gold atoms were repelled from the buffer layer
(see Videos S1 and S2 in Supporting Information). These results are in complete
agreement with the corresponding results for a graphene sheet (i.e.,
the total energy for an Au position of 0.5 or 0.1 Å above the
graphene sheet is larger than for any Au position further away from
graphene). Moreover, the final SiC/Au/graphene structure was found
to be more energetically stable than the initial SiC/buffer/Au structure
(by a value of 2.16 eV/supercell). Hence, the intercalation process
is thermodynamically possible but kinetically hindered. Next, we assumed
that Au overcame the energy barrier by considering gold atom exactly
at the middle of and 0.1 Å below the GS. We found that in this
situation, intercalation can happen and the graphene sheet detached
completely from the SiC substrate (see Videos S3 and S4). Finally, when the Au
atom was initially positioned 0.2 Å below the buffer layer, the
latter did not only detach from the SiC substrate (as a result of
the geometry optimization) but also formed a perfect planer graphene
sheet (see Video S5). The optimized geometries
of SiC/buffer and SiC/Au/graphene are shown in Figure , with the Au atom initially located at 0.1
Å above, at the middle of, and 0.2 Å below the buffer layer.
Figure 2
Initial
and final geometries of the SiC/buffer structures with
the Au atom initially located (a) 0.1 Å above, (b) within, or
(c) 0.2 Å below the defect-free buffer layer. The Si, C, H, and
Au atoms are shown in orange, gray, white, and yellow colors, respectively.
Initial
and final geometries of the SiC/buffer structures with
the Au atom initially located (a) 0.1 Å above, (b) within, or
(c) 0.2 Å below the defect-free buffer layer. The Si, C, H, and
Au atoms are shown in orange, gray, white, and yellow colors, respectively.As the next step, the same procedure was used for
single- and double-vacancy
buffer layers. It was then observed that the Au intercalation cannot
take place. Neither for the Au atom initially above, nor below, the
buffer layer (see Videos S6 and S7 files). As an explanation to these observations,
dangling bonds (i.e., radical C atoms) were formed at the edges of
the vacancies when creating these single and double vacancies. Therefore,
the Au atom became trapped in the buffer layer, forming covalent bonds
with buffer C atoms. The initial and final geometrical structures
of the SiC/Au/buffer system, with single and double vacancies in the
buffer layer, are presented in Figure . The Au atom, here, has been initially positioned
0.2 Å below the buffer layer. These two structures are further
proof of the fact that intercalation with Au atoms cannot take place
through a buffer layer with either single or double vacancies.
Figure 3
Initial and
final geometries of the SiC/buffer structures with
the Au atom initially located 0.2 Å below the buffer layer; (a)
a buffer layer with a SV, and (b) a buffer layer with a DV.
Initial and
final geometries of the SiC/buffer structures with
the Au atom initially located 0.2 Å below the buffer layer; (a)
a buffer layer with a SV, and (b) a buffer layer with a DV.As a conclusion, vacancies in the buffer layer
will reduce the
energy barrier for an Au intercalation process. However, the vacancies
contain “dangling bonds” (i.e., C atoms with unpaired
electrons), which will cause bond formation with the Au atom. The
latter of these factors were found to be decisive in the prevention
of the Au intercalation process.
Electronic Properties of
the Buffer Layer (before and after
Au Intercalation)
The projected band structure for a nondefect
buffer layer, being attached to SiC(0001), has been calculated before
and after a successful Au intercalation process. The purpose of these
calculations was to confirm that the result of the intercalation process
is the formation of a detached graphene sheet. The calculated band
structures, for the initial and final geometrical structures, can
be seen in Figure . As can be seen in this figure, there is no evidence of a Dirac
point (DP) of graphene for the initial structure, where the buffer
layer was partially bound to the Si surface of the SiC substrate.
However, the DP was completely recovered for the final structure with
a free-standing graphene sheet. Moreover, there is a linear dispersion
of π-bands for this monolayer of graphene. This result is a
strong support for the observation that graphene has become completely
detached from the surface of the SiC substrate. Intercalation by Au
has, therefore, led to a quasi-free-standing layer of graphene, which
has also been observed by experimentalists.[15] Only one Au atom per supercell was responsible for this detachment,
which is equivalent to 3.12% of the total number of C atoms in the
buffer layer. We can also observe a gap at the DP of graphene, which
has its origin in the A B sublattice symmetry breaking of graphene
(due to the interaction with Au).[16]
Figure 4
Projected band
structures for the buffer layer on top of SiC, before
(left) and after (right) Au intercalation. The white lines represent
the p bands of the carbon layer; buffer
(left) and graphene (right). The initial and final structures of Figure c have been used
here.
Projected band
structures for the buffer layer on top of SiC, before
(left) and after (right) Au intercalation. The white lines represent
the p bands of the carbon layer; buffer
(left) and graphene (right). The initial and final structures of Figure c have been used
here.
Conclusions
The
purpose of the present work was to study the intercalation
of Au atoms into SiC(0001)/buffer systems. However, these model systems
were too big for calculations using the climbing image NEB method.
Hence, more qualitative values of the intercalation energy barriers
were instead obtained by examining the penetration of an Au atom through
a graphene sheet. Both defect-free sheets, as well as graphene sheets
with single and double vacancies, were used in these calculations.
The energy barrier for Au penetration through a defect-free graphene
was shown to be very high, which will prevent the occurrence of Au
penetration (i.e., without the addition of extra energy). On the contrary,
the corresponding energy barriers were significantly reduced for single
and double vacancies in the graphene sheet. In fact, the energy barrier
for a SV was 5 times smaller than for a defect-free graphene sheet.
Moreover, a graphene sheet with a DV did not show any energy barrier
at all. Another type of defect in graphene has also been created by
enlarging one of the hexagonal rings. The calculated energy barrier
for this type of defect was almost 12 times smaller than for a defect-free
graphene sheet. Other interesting observations were made for these
graphene sheets, and that were the energy minima which were observed
for the defect-containing sheets. Geometry optimization calculations
were, therefore, made (based on DFT) for the larger SiC(0001)/buffer
system, where the Au atom was initially positioned right above or
below the carbon buffer layer. Even though the graphene layer defects
caused smaller energy barriers for the Au penetration, this type of
process could not take place on the SiC(0001)/buffer surface. The
reason is the radical C atoms that surrounds the defects, which will
interact with (and thereby bind to) the approaching Au atom. The only
possibility for an Au intercalation is by using a defect-free buffer
layer and a large enough energy contribution (either by using a high
enough temperature or by using Au bombardment with high velocities).When deliberately positioning the Au atom within the nondefect
SiC(0001)/buffer interface, and thereafter performing a geometry optimization
calculation, a graphene sheet was found to be completely detached
from the SiC substrate. (It is, thus, here assumed that the intercalation
process has taken place). The projected band structures for the SiC(0001)/buffer
structure, before and after Au intercalation, were also calculated.
As a result, the detached graphene sheet recovered its DP, which is
the ultimate proof of a free-standing graphene structure. These results
do shed some light on the prerequisites for Au intercalation into
a SiC(0001)/buffer interface.
Computational Methods
NEB calculations,
optimization of geometrical structures, and analysis
of electronic structures have in the present study been performed
by using DFT (as implemented in the Quantum ATK 2019.03 simulation
package[17,18]). The PseudoDojo-High norm-conserving pseudopotential,[19] based on a Perdew, Burke, and Ernzerhof functional,
was used for the total energy calculations. Also, the DFT-D2 method,[20] in combination with counterpoise corrections,[21,22] was considered in describing the long-range van der Waals forces
between the buffer layer and the intercalated Au atoms. As a model
of the SiC/buffer system, a supercell was initially built which consisted
of a (8 × 8) graphene sheet on top of a SiC(0001) substrate (on
the Si face of SiC). This system was, thereafter, geometry optimized
to produce the SiC/buffer system. A free-standing graphene sheet was
also modeled in the present study. The graphene model was used to
estimate the intercalation energy barrier for an Au atom, and the
model of the SiC/buffer system was used in studying the interaction
between the intercalating Au atom and the SiC/buffer system. A Monkhorst–Pack
sampling of 5 × 5 × 1 and a cutoff energy of 80 ha were
considered for both the NEB calculations (for the energy barriers)
and the geometry optimizations (for the interactions). Moreover, a
periodic boundary condition, with a vacuum size of 25 Å, was
used for all calculations in the present study. Also, the image-dependent
pair potential method[23] was used as an
interpolation method in the climbing image NEB calculations (where
also the initial and final steps were geometry optimized).
Authors: Søren Smidstrup; Troels Markussen; Pieter Vancraeyveld; Jess Wellendorff; Julian Schneider; Tue Gunst; Brecht Verstichel; Daniele Stradi; Petr A Khomyakov; Ulrik G Vej-Hansen; Maeng-Eun Lee; Samuel T Chill; Filip Rasmussen; Gabriele Penazzi; Fabiano Corsetti; Ari Ojanperä; Kristian Jensen; Mattias L N Palsgaard; Umberto Martinez; Anders Blom; Mads Brandbyge; Kurt Stokbro Journal: J Phys Condens Matter Date: 2019-08-30 Impact factor: 2.333