| Literature DB >> 32586051 |
Mahama Alhassan1, Ashish Kumar1,2, John Lopez3, Fernando Albericio1,4,5,6, Beatriz G de la Torre2.
Abstract
The protection of side-chain arginine in solid-phase peptide synthesis requires attention since current protecting groups have several drawbacks. Herein, the NO2 group, which is scarcely used, has been revisited. This work shows that it prevents the formation of δ-lactam, the most severe side-reaction during the incorporation of Arg. Moreover, it is stable in solution for long periods and can be removed in an easy-to-understand manner. Thus, this protecting group can be removed while the protected peptide is still anchored to the resin, with SnCl2 as reducing agent in mild acid conditions using 2-MeTHF as solvent at 55 °C. Furthermore, we demonstrate that sonochemistry can facilitate the removal of NO2 from multiple Arg-containing peptides.Entities:
Keywords: NBP; microwave; orthogonal protection; protecting group; side-reaction; solid-phase peptide synthesis; sonochemistry; ultrasounds; δ-lactam formation
Mesh:
Substances:
Year: 2020 PMID: 32586051 PMCID: PMC7352207 DOI: 10.3390/ijms21124464
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Most used Arg side-chain protecting groups.
Stability of Fmoc-Arg(X)-OH in DMF (N,N-dimethylformamide) and NBP (N-butylpyrrolidone) at room temperature.
| 0 h | 1 h | 24 h | 48 h | 10 d | 15 d | 20 d | 30 d | |
|---|---|---|---|---|---|---|---|---|
|
| 88.8 | 88.6 | 86.9 | 85.0 | 77.6 | 65.1 | 58.5 | 51.2 |
|
| 88.8 | 88.4 | 85.8 | 83.5 | 71.8 | 62.0 | 52.2 | 37.7 |
|
| 100 | 100 | 100 | 100 | 100 | |||
|
| 100 | 100 | 100 | 100 | 100 |
1 The study was stopped after 10 days, no changes were observed during this period.
Figure 2Stability of the mixture of Fmoc-Arg(Boc)2-OH/OxymaPure 1:1 in DMF (A) and NBP (B) at 45 °C. Elution: 30-95% of B into A in 15 min.
Scheme 1Activation of protected Arg derivatives and incorporation on a tripeptidyl resin.
Figure 3High-performance liquid chromatography (HPLC) chromatograms of the supernatants after the protected Arg derivatives [A, NO2; B, Pbf; C, (Boc)2] were activated with DIC (N,N’-diisopropylcarbodiimide) and OxymaPure and then added to the peptidyl resin. Elution: 30–95% of B into A in 15 min.
Figure 4Peptidyl resins used in this study.
Figure 5HPLC of the removal of the NO2 group from H-Leu-Arg(NO2)-Phe-NH-Rinkamide-resin (A) and H-Asp(OtBu)-Phe-Gly-Arg(NO2)-Gly-NH-Rink-amide-resin (B) using 2 M SnCl2-0.04 M phenol-0.2 M aq HCl in 2-MeTHF at 55 °C. a: protected peptide; b: unprotected peptide. Elution: 10-25% of B into A for (A) and 5-95% of B into A for (B) in 15 min.
Figure 6HPLC of the removal of the NO2 groups from protected bradykinin-NH-Rink-amide-resin using 2 M SnCl2-0.04 M phenol-0.2 M aq HCl in 2-MeTHF at 55 °C (MW). a: protected peptide; b: unprotected peptide. Elution: 5–95% of B into A in 15 min.
Figure 7HPLC of the removal of the NO2 groups from H-[Trp(Boc)-Arg(NO2)]2-Pro-NH-Rink-amide resin (A) and H-[Trp(Boc)-Arg(NO2)]3-Pro-NH-Rink-amide resin (B) using 2 M SnCl2-0.04 M phenol-0.2 M aq HCl in 2-MeTHF at 55 °C. a: protected peptide; b: unprotected peptide. elution: 5-95% of B into A in 15 min.