Literature DB >> 32582456

Comparative analysis of transcriptomes revealed the molecular mechanism of development of Tricholoma matsutake at different stages of fruiting bodies.

Xian Tang1, Xiang Ding2, Yi-Ling Hou1.   

Abstract

The purpose of the study is to investigate the molecular mechanisms of development of Tricholoma matsutake fruiting body at the primordial stage (TM-1), the intermediate stage (TM-2) and the mature stage (TM-3) using RNA-Seq sequencing technology. The analysis of gene expression level revealed that the Spn2 and Eef1a1 gene were the key genes in the primordial stage of T. matsutake by regulating cytokinesis, protein synthesis, and cell growth. And the Ubc, Atp6, Cytb, and Pth2 gene were the key genes in the mature stage of T. matsutake by regulating energy metabolism and protein synthesis. Differential expression genes (DEGs) analysis results showed that Cdc28, Rad53, Dun1, Pho85 and Pho81 were the key DEGs regulating cell cycle genes of T. matsutake from primordial stage to intermediate stage. And APC, Cyr1, Cdc45, Spo11 and Rec8 genes were the key DEGs for the meiosis and sporogenesis of T. matsutake from the intermediate stage to the mature stage. © The Korean Society of Food Science and Technology 2020.

Entities:  

Keywords:  Development; Molecular mechanism; RNA-sequencing; Transcriptome; Tricholoma matsutake

Year:  2020        PMID: 32582456      PMCID: PMC7297875          DOI: 10.1007/s10068-020-00732-8

Source DB:  PubMed          Journal:  Food Sci Biotechnol        ISSN: 1226-7708            Impact factor:   2.391


  51 in total

1.  Transcription factor genes of Schizophyllum commune involved in regulation of mushroom formation.

Authors:  Robin A Ohm; Jan F de Jong; Charissa de Bekker; Han A B Wösten; Luis G Lugones
Journal:  Mol Microbiol       Date:  2011-08-04       Impact factor: 3.501

2.  A DNA topoisomerase VI-like complex initiates meiotic recombination.

Authors:  Nathalie Vrielynck; Aurélie Chambon; Daniel Vezon; Lucie Pereira; Liudmila Chelysheva; Arnaud De Muyt; Christine Mézard; Claudine Mayer; Mathilde Grelon
Journal:  Science       Date:  2016-02-26       Impact factor: 47.728

3.  Transcription factor PRO1 targets genes encoding conserved components of fungal developmental signaling pathways.

Authors:  Eva Katharina Steffens; Kordula Becker; Sabine Krevet; Ines Teichert; Ulrich Kück
Journal:  Mol Microbiol       Date:  2016-09-26       Impact factor: 3.501

4.  Effect of fairy ring bacteria on the growth of Tricholoma matsutake in vitro culture.

Authors:  Seung-Yoon Oh; Young Woon Lim
Journal:  Mycorrhiza       Date:  2018-03-12       Impact factor: 3.387

Review 5.  Structural biology of the separase-securin complex with crucial roles in chromosome segregation.

Authors:  Shukun Luo; Liang Tong
Journal:  Curr Opin Struct Biol       Date:  2018-02-14       Impact factor: 6.809

6.  A qPCR assay that specifically quantifies Tricholoma matsutake biomass in natural soil.

Authors:  Muneyoshi Yamaguchi; Maki Narimatsu; Toru Fujita; Masataka Kawai; Hisayasu Kobayashi; Akira Ohta; Akiyoshi Yamada; Norihisa Matsushita; Hitoshi Neda; Tomoko Shimokawa; Hitoshi Murata
Journal:  Mycorrhiza       Date:  2016-07-01       Impact factor: 3.387

7.  Profile of Ophiocordyceps sinensis transcriptome and differentially expressed genes in three different mycelia, sclerotium and fruiting body developmental stages.

Authors:  Xin Zhong; Li Gu; Haizhen Wang; Danhong Lian; Yimei Zheng; Sha Zhou; Wei Zhou; Jinlei Gu; Guren Zhang; Xin Liu
Journal:  Fungal Biol       Date:  2018-06-11

8.  Comparative transcriptome analysis identified candidate genes involved in mycelium browning in Lentinula edodes.

Authors:  Seung-Il Yoo; Hwa-Yong Lee; Kesavan Markkandan; Suyun Moon; Yong Ju Ahn; Sumin Ji; Junsu Ko; Seong-Jin Kim; Hojin Ryu; Chang Pyo Hong
Journal:  BMC Genomics       Date:  2019-02-08       Impact factor: 3.969

9.  Molecular mechanism of APC/C activation by mitotic phosphorylation.

Authors:  Suyang Zhang; Leifu Chang; Claudio Alfieri; Ziguo Zhang; Jing Yang; Sarah Maslen; Mark Skehel; David Barford
Journal:  Nature       Date:  2016-04-27       Impact factor: 49.962

10.  Structure of human Cdc45 and implications for CMG helicase function.

Authors:  Aline C Simon; Vincenzo Sannino; Vincenzo Costanzo; Luca Pellegrini
Journal:  Nat Commun       Date:  2016-05-18       Impact factor: 14.919

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