Literature DB >> 32572234

The GlyCosmos Portal: a unified and comprehensive web resource for the glycosciences.

Issaku Yamada1, Masaaki Shiota2, Daisuke Shinmachi3, Tamiko Ono2, Shinichiro Tsuchiya1, Masae Hosoda2, Akihiro Fujita2, Nobuyuki P Aoki3, Yu Watanabe4, Noriaki Fujita5, Kiyohiko Angata5, Hiroyuki Kaji5, Hisashi Narimatsu5, Shujiro Okuda4, Kiyoko F Aoki-Kinoshita6.   

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Year:  2020        PMID： 32572234     DOI： 10.1038/s41592-020-0879-8

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  1 in total

1.  GlyGen: Computational and Informatics Resources for Glycoscience.

Authors:  William S York; Raja Mazumder; Rene Ranzinger; Nathan Edwards; Robel Kahsay; Kiyoko F Aoki-Kinoshita; Matthew P Campbell; Richard D Cummings; Ten Feizi; Maria Martin; Darren A Natale; Nicolle H Packer; Robert J Woods; Gaurav Agarwal; Sena Arpinar; Sanath Bhat; Judith Blake; Leyla Jael Garcia Castro; Brian Fochtman; Jeffrey Gildersleeve; Radoslav Goldman; Xavier Holmes; Vinamra Jain; Sujeet Kulkarni; Rupali Mahadik; Akul Mehta; Reza Mousavi; Sandeep Nakarakommula; Rahi Navelkar; Nagarajan Pattabiraman; Michael J Pierce; Karen Ross; Preethi Vasudev; Jeet Vora; Tatiana Williamson; Wenjin Zhang
Journal:  Glycobiology       Date:  2020-01-28       Impact factor: 4.313
  1 in total
  20 in total

1.  Informatics Ecosystems to Advance the Biology of Glycans.

Authors:  Lewis J Frey
Journal:  Methods Mol Biol       Date:  2022

2.  RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D.

Authors:  Stephen K Burley; Charmi Bhikadiya; Chunxiao Bi; Sebastian Bittrich; Li Chen; Gregg V Crichlow; Jose M Duarte; Shuchismita Dutta; Maryam Fayazi; Zukang Feng; Justin W Flatt; Sai J Ganesan; David S Goodsell; Sutapa Ghosh; Rachel Kramer Green; Vladimir Guranovic; Jeremy Henry; Brian P Hudson; Catherine L Lawson; Yuhe Liang; Robert Lowe; Ezra Peisach; Irina Persikova; Dennis W Piehl; Yana Rose; Andrej Sali; Joan Segura; Monica Sekharan; Chenghua Shao; Brinda Vallat; Maria Voigt; John D Westbrook; Shamara Whetstone; Jasmine Y Young; Christine Zardecki
Journal:  Protein Sci       Date:  2021-11-06       Impact factor: 6.725

Review 3.  Tools for mammalian glycoscience research.

Authors:  Matthew E Griffin; Linda C Hsieh-Wilson
Journal:  Cell       Date:  2022-07-08       Impact factor: 66.850

4.  Functions of Glycosylation and Related Web Resources for Its Prediction.

Authors:  Kiyoko F Aoki-Kinoshita
Journal:  Methods Mol Biol       Date:  2022

5.  CarboGrove: a resource of glycan-binding specificities through analyzed glycan-array datasets from all platforms.

Authors:  Zachary L Klamer; Chelsea M Harris; Jonathan M Beirne; Jessica E Kelly; Jian Zhang; Brian B Haab
Journal:  Glycobiology       Date:  2022-07-13       Impact factor: 5.954

6.  PubChem Protein, Gene, Pathway, and Taxonomy Data Collections: Bridging Biology and Chemistry through Target-Centric Views of PubChem Data.

Authors:  Sunghwan Kim; Tiejun Cheng; Siqian He; Paul A Thiessen; Qingliang Li; Asta Gindulyte; Evan E Bolton
Journal:  J Mol Biol       Date:  2022-02-25       Impact factor: 6.151

Review 7.  Big-Data Glycomics: Tools to Connect Glycan Biosynthesis to Extracellular Communication.

Authors:  Benjamin P Kellman; Nathan E Lewis
Journal:  Trends Biochem Sci       Date:  2020-12-18       Impact factor: 13.807

Review 8.  Importance of evaluating protein glycosylation in pluripotent stem cell-derived cardiomyocytes for research and clinical applications.

Authors:  Maia I Kelly; Mustafa Albahrani; Chase Castro; Ellen Poon; Bin Yan; Jack Littrell; Matthew Waas; Kenneth R Boheler; Rebekah L Gundry
Journal:  Pflugers Arch       Date:  2021-04-08       Impact factor: 3.657

9.  GTXplorer: A portal to navigate and visualize the evolutionary information encoded in fold A glycosyltransferases.

Authors:  Rahil Taujale; Saber Soleymani; Amitabh Priyadarshi; Aarya Venkat; Wayland Yeung; Krzysztof J Kochut; Natarajan Kannan
Journal:  Glycobiology       Date:  2021-12-18       Impact factor: 5.954

Review 10.  Three-Dimensional Structures of Carbohydrates and Where to Find Them.

Authors:  Sofya I Scherbinina; Philip V Toukach
Journal:  Int J Mol Sci       Date:  2020-10-18       Impact factor: 5.923
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