Literature DB >> 3256722

A novel method for nucleic acid sequence determination.

W Bains1, G C Smith.   

Abstract

We describe a novel sequencing methodology which should be readily and completely automated. The method relies on fragmentation of a nucleotide or deoxynucleotide sequence into short fragments, and subsequent quantitation of the fragments by hybridization to oligo-deoxynucleotides on a solid support. The original sequence may be reconstructed from the resulting table of fragment frequencies. We present a specific protocol which would allow practical implementation of this approach.

Entities:  

Mesh:

Year:  1988        PMID: 3256722     DOI: 10.1016/s0022-5193(88)80246-7

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  34 in total

Review 1.  Mutational analysis using oligonucleotide microarrays.

Authors:  J G Hacia; F S Collins
Journal:  J Med Genet       Date:  1999-10       Impact factor: 6.318

2.  Secondary structure prediction and structure-specific sequence analysis of single-stranded DNA.

Authors:  F Dong; H T Allawi; T Anderson; B P Neri; V I Lyamichev
Journal:  Nucleic Acids Res       Date:  2001-08-01       Impact factor: 16.971

3.  A multi-enzyme model for Pyrosequencing.

Authors:  Ali Agah; Mariam Aghajan; Foad Mashayekhi; Sasan Amini; Ronald W Davis; James D Plummer; Mostafa Ronaghi; Peter B Griffin
Journal:  Nucleic Acids Res       Date:  2004-12-02       Impact factor: 16.971

Review 4.  Long-range walking techniques in positional cloning strategies.

Authors:  L Stubbs
Journal:  Mamm Genome       Date:  1992       Impact factor: 2.957

5.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

6.  Identification of non-specific hybridization using an empirical equation fitted to non-equilibrium dissociation curves.

Authors:  Samuel W Baushke; Robert D Stedtfeld; Dieter M Tourlousse; Farhan Ahmad; Lukas M Wick; Erdogan Gulari; James M Tiedje; Syed A Hashsham
Journal:  J Microbiol Methods       Date:  2012-04-17       Impact factor: 2.363

7.  DNA sequencing by hybridization: 100 bases read by a non-gel-based method.

Authors:  Z Strezoska; T Paunesku; D Radosavljević; I Labat; R Drmanac; R Crkvenjakov
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-15       Impact factor: 11.205

Review 8.  The incredible shrinking world of DNA microarrays.

Authors:  Sarah J Wheelan; Francisco Martínez Murillo; Jef D Boeke
Journal:  Mol Biosyst       Date:  2008-04-17

9.  Hybridization of DNA targets to glass-tethered oligonucleotide probes.

Authors:  W G Beattie; L Meng; S L Turner; R S Varma; D D Dao; K L Beattie
Journal:  Mol Biotechnol       Date:  1995-12       Impact factor: 2.695

10.  DNA analysis and diagnostics on oligonucleotide microchips.

Authors:  G Yershov; V Barsky; A Belgovskiy; E Kirillov; E Kreindlin; I Ivanov; S Parinov; D Guschin; A Drobishev; S Dubiley; A Mirzabekov
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.