Literature DB >> 32562617

Unraveling VEALYL Amyloid Formation Using Advanced Vibrational Spectroscopy and Microscopy.

Steven J Roeters1, Mathias Sawall2, Carl E Eskildsen3, Matthijs R Panman4, Gergely Tordai4, Mike Koeman5, Klaus Neymeyr6, Jeroen Jansen5, Age K Smilde7, Sander Woutersen4.   

Abstract

Intermediate species are hypothesized to play an important role in the toxicity of amyloid formation, a process associated with many diseases. This process can be monitored with conventional and two-dimensional infrared spectroscopy, vibrational circular dichroism, and optical and electron microscopy. Here, we present how combining these techniques provides insight into the aggregation of the hexapeptide VEALYL (Val-Glu-Ala-Leu-Tyr-Leu), the B-chain residue 12-17 segment of insulin that forms amyloid fibrils (intermolecularly hydrogen-bonded β-sheets) when the pH is lowered below 4. Under such circumstances, the aggregation commences after approximately an hour and continues to develop over a period of weeks. Singular value decompositions of one-dimensional and two-dimensional infrared spectroscopy spectra indicate that intermediate species are formed during the aggregation process. Multivariate curve resolution analyses of the one and two-dimensional infrared spectroscopy data show that the intermediates are more fibrillar and deprotonated than the monomers, whereas they are less ordered than the final fibrillar structure that is slowly formed from the intermediates. A comparison between the vibrational circular dichroism spectra and the scanning transmission electron microscopy and optical microscope images shows that the formation of mature fibrils of VEALYL correlates with the appearance of spherulites that are on the order of several micrometers, which give rise to a "giant" vibrational circular dichroism effect.
Copyright © 2020 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2020        PMID: 32562617      PMCID: PMC7335935          DOI: 10.1016/j.bpj.2020.05.026

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  51 in total

1.  Effect of environmental factors on the kinetics of insulin fibril formation: elucidation of the molecular mechanism.

Authors:  L Nielsen; R Khurana; A Coats; S Frokjaer; J Brange; S Vyas; V N Uversky; A L Fink
Journal:  Biochemistry       Date:  2001-05-22       Impact factor: 3.162

2.  Two-dimensional infrared spectroscopy of antiparallel beta-sheet secondary structure.

Authors:  Nurettin Demirdöven; Christopher M Cheatum; Hoi Sung Chung; Munira Khalil; Jasper Knoester; Andrei Tokmakoff
Journal:  J Am Chem Soc       Date:  2004-06-30       Impact factor: 15.419

3.  Insight into the internal structure of amyloid-β oligomers by isotope-edited Fourier transform infrared spectroscopy.

Authors:  Cesare M Baronio; Maurizio Baldassarre; Andreas Barth
Journal:  Phys Chem Chem Phys       Date:  2019-04-17       Impact factor: 3.676

Review 4.  The toxic Aβ oligomer and Alzheimer's disease: an emperor in need of clothes.

Authors:  Iryna Benilova; Eric Karran; Bart De Strooper
Journal:  Nat Neurosci       Date:  2012-01-29       Impact factor: 24.884

5.  Not All β-Sheets Are the Same: Amyloid Infrared Spectra, Transition Dipole Strengths, and Couplings Investigated by 2D IR Spectroscopy.

Authors:  Justin P Lomont; Joshua S Ostrander; Jia-Jung Ho; Megan K Petti; Martin T Zanni
Journal:  J Phys Chem B       Date:  2017-09-19       Impact factor: 2.991

Review 6.  Ubiquitous amyloids.

Authors:  Wojciech Pulawski; Umesh Ghoshdastider; Vincenza Andrisano; Slawomir Filipek
Journal:  Appl Biochem Biotechnol       Date:  2012-02-19       Impact factor: 2.926

Review 7.  On the lag phase in amyloid fibril formation.

Authors:  Paolo Arosio; Tuomas P J Knowles; Sara Linse
Journal:  Phys Chem Chem Phys       Date:  2015-03-28       Impact factor: 3.676

8.  Hydrophobic Collapse in N-Methylacetamide-Water Mixtures.

Authors:  Evgeniia Salamatova; Ana V Cunha; Robbert Bloem; Steven J Roeters; Sander Woutersen; Thomas L C Jansen; Maxim S Pshenichnikov
Journal:  J Phys Chem A       Date:  2018-02-22       Impact factor: 2.781

9.  Interplay between Hydrogen Bonding and Vibrational Coupling in Liquid N-Methylacetamide.

Authors:  Ana V Cunha; Evgeniia Salamatova; Robbert Bloem; Steven J Roeters; Sander Woutersen; Maxim S Pshenichnikov; Thomas L C Jansen
Journal:  J Phys Chem Lett       Date:  2017-05-19       Impact factor: 6.475

10.  Proliferation of amyloid-β42 aggregates occurs through a secondary nucleation mechanism.

Authors:  Samuel I A Cohen; Sara Linse; Leila M Luheshi; Erik Hellstrand; Duncan A White; Luke Rajah; Daniel E Otzen; Michele Vendruscolo; Christopher M Dobson; Tuomas P J Knowles
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-23       Impact factor: 11.205

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  2 in total

1.  Protein Dynamics by Two-Dimensional Infrared Spectroscopy.

Authors:  Goran W Tumbic; Md Yeathad Hossan; Megan C Thielges
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2021-07-27       Impact factor: 12.400

2.  Ice-nucleating proteins are activated by low temperatures to control the structure of interfacial water.

Authors:  Steven J Roeters; Thaddeus W Golbek; Mikkel Bregnhøj; Taner Drace; Sarah Alamdari; Winfried Roseboom; Gertjan Kramer; Tina Šantl-Temkiv; Kai Finster; Jim Pfaendtner; Sander Woutersen; Thomas Boesen; Tobias Weidner
Journal:  Nat Commun       Date:  2021-02-19       Impact factor: 14.919

  2 in total

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