Literature DB >> 32559497

Altered RNA Splicing by Mutant p53 Activates Oncogenic RAS Signaling in Pancreatic Cancer.

Luisa F Escobar-Hoyos1, Alex Penson2, Ram Kannan3, Hana Cho4, Chun-Hao Pan5, Rohit K Singh6, Lisa H Apken7, G Aaron Hobbs8, Renhe Luo9, Nicolas Lecomte10, Sruthi Babu5, Fong Cheng Pan10, Direna Alonso-Curbelo11, John P Morris11, Gokce Askan12, Olivera Grbovic-Huezo13, Paul Ogrodowski3, Jonathan Bermeo10, Joseph Saglimbeni10, Cristian D Cruz10, Yu-Jui Ho3, Sharon A Lawrence14, Jerry P Melchor10, Grant A Goda15, Karen Bai5, Alessandro Pastore4, Simon J Hogg4, Srivatsan Raghavan16, Peter Bailey17, David K Chang18, Andrew Biankin19, Kenneth R Shroyer5, Brian M Wolpin20, Andrew J Aguirre16, Andrea Ventura3, Barry Taylor21, Channing J Der22, Daniel Dominguez22, Daniel Kümmel6, Andrea Oeckinghaus7, Scott W Lowe23, Robert K Bradley24, Omar Abdel-Wahab4, Steven D Leach25.   

Abstract

Pancreatic ductal adenocarcinoma (PDAC) is driven by co-existing mutations in KRAS and TP53. However, how these mutations collaborate to promote this cancer is unknown. Here, we uncover sequence-specific changes in RNA splicing enforced by mutant p53 which enhance KRAS activity. Mutant p53 increases expression of splicing regulator hnRNPK to promote inclusion of cytosine-rich exons within GTPase-activating proteins (GAPs), negative regulators of RAS family members. Mutant p53-enforced GAP isoforms lose cell membrane association, leading to heightened KRAS activity. Preventing cytosine-rich exon inclusion in mutant KRAS/p53 PDACs decreases tumor growth. Moreover, mutant p53 PDACs are sensitized to inhibition of splicing via spliceosome inhibitors. These data provide insight into co-enrichment of KRAS and p53 mutations and therapeutics targeting this mechanism in PDAC.
Copyright © 2020. Published by Elsevier Inc.

Entities:  

Keywords:  GAP17; GTPase signaling; KRAS; RNA splicing; SF3B1; hnRNPK; oncogenes; p53; pancreatic cancer; splicing inhibitors

Mesh:

Substances:

Year:  2020        PMID: 32559497      PMCID: PMC8028848          DOI: 10.1016/j.ccell.2020.05.010

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  60 in total

1.  Mist1-KrasG12D knock-in mice develop mixed differentiation metastatic exocrine pancreatic carcinoma and hepatocellular carcinoma.

Authors:  David A Tuveson; Liqin Zhu; Aarthi Gopinathan; Nicholas A Willis; Leili Kachatrian; Rebecca Grochow; Christopher L Pin; Natalia Y Mitin; Elizabeth J Taparowsky; Phyllis A Gimotty; Ralph H Hruban; Tyler Jacks; Stephen F Konieczny
Journal:  Cancer Res       Date:  2006-01-01       Impact factor: 12.701

2.  Sequence, Structure, and Context Preferences of Human RNA Binding Proteins.

Authors:  Daniel Dominguez; Peter Freese; Maria S Alexis; Amanda Su; Myles Hochman; Tsultrim Palden; Cassandra Bazile; Nicole J Lambert; Eric L Van Nostrand; Gabriel A Pratt; Gene W Yeo; Brenton R Graveley; Christopher B Burge
Journal:  Mol Cell       Date:  2018-06-07       Impact factor: 17.970

3.  Differential analysis of RNA-seq incorporating quantification uncertainty.

Authors:  Harold Pimentel; Nicolas L Bray; Suzette Puente; Páll Melsted; Lior Pachter
Journal:  Nat Methods       Date:  2017-06-05       Impact factor: 28.547

4.  Specific interactions outside the proline-rich core of two classes of Src homology 3 ligands.

Authors:  S Feng; C Kasahara; R J Rickles; S L Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  1995-12-19       Impact factor: 11.205

5.  EGF receptor is required for KRAS-induced pancreatic tumorigenesis.

Authors:  Christine M Ardito; Barbara M Grüner; Kenneth K Takeuchi; Clara Lubeseder-Martellato; Nicole Teichmann; Pawel K Mazur; Kathleen E Delgiorno; Eileen S Carpenter; Christopher J Halbrook; Jason C Hall; Debjani Pal; Thomas Briel; Alexander Herner; Marija Trajkovic-Arsic; Bence Sipos; Geou-Yarh Liou; Peter Storz; Nicole R Murray; David W Threadgill; Maria Sibilia; M Kay Washington; Carole L Wilson; Roland M Schmid; Elaine W Raines; Howard C Crawford; Jens T Siveke
Journal:  Cancer Cell       Date:  2012-09-11       Impact factor: 31.743

6.  Association between GTPase activators for Rho and Ras families.

Authors:  J Settleman; C F Albright; L C Foster; R A Weinberg
Journal:  Nature       Date:  1992-09-10       Impact factor: 49.962

7.  Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor.

Authors:  Matthew R Janes; Jingchuan Zhang; Lian-Sheng Li; Rasmus Hansen; Ulf Peters; Xin Guo; Yuching Chen; Anjali Babbar; Sarah J Firdaus; Levan Darjania; Jun Feng; Jeffrey H Chen; Shuangwei Li; Shisheng Li; Yun O Long; Carol Thach; Yuan Liu; Ata Zarieh; Tess Ely; Jeff M Kucharski; Linda V Kessler; Tao Wu; Ke Yu; Yi Wang; Yvonne Yao; Xiaohu Deng; Patrick P Zarrinkar; Dirk Brehmer; Dashyant Dhanak; Matthew V Lorenzi; Dana Hu-Lowe; Matthew P Patricelli; Pingda Ren; Yi Liu
Journal:  Cell       Date:  2018-01-25       Impact factor: 41.582

8.  Enrichr: a comprehensive gene set enrichment analysis web server 2016 update.

Authors:  Maxim V Kuleshov; Matthew R Jones; Andrew D Rouillard; Nicolas F Fernandez; Qiaonan Duan; Zichen Wang; Simon Koplev; Sherry L Jenkins; Kathleen M Jagodnik; Alexander Lachmann; Michael G McDermott; Caroline D Monteiro; Gregory W Gundersen; Avi Ma'ayan
Journal:  Nucleic Acids Res       Date:  2016-05-03       Impact factor: 16.971

9.  SRSF2 Mutations Contribute to Myelodysplasia by Mutant-Specific Effects on Exon Recognition.

Authors:  Eunhee Kim; Janine O Ilagan; Yang Liang; Gerrit M Daubner; Stanley C-W Lee; Aravind Ramakrishnan; Yue Li; Young Rock Chung; Jean-Baptiste Micol; Michele E Murphy; Hana Cho; Min-Kyung Kim; Ahmad S Zebari; Shlomzion Aumann; Christopher Y Park; Silvia Buonamici; Peter G Smith; H Joachim Deeg; Camille Lobry; Iannis Aifantis; Yorgo Modis; Frederic H-T Allain; Stephanie Halene; Robert K Bradley; Omar Abdel-Wahab
Journal:  Cancer Cell       Date:  2015-05-11       Impact factor: 31.743

Review 10.  The Significance of Ras Activity in Pancreatic Cancer Initiation.

Authors:  Craig D Logsdon; Weiqin Lu
Journal:  Int J Biol Sci       Date:  2016-01-28       Impact factor: 6.580

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  33 in total

1.  Mutant p53 gain of function mediates cancer immune escape that is counteracted by APR-246.

Authors:  Xiaolei Zhou; Gema Sanz Santos; Yue Zhan; Mariana M S Oliveira; Shiva Rezaei; Madhurendra Singh; Sylvain Peuget; Lisa S Westerberg; John Inge Johnsen; Galina Selivanova
Journal:  Br J Cancer       Date:  2022-09-22       Impact factor: 9.075

2.  KRAS mutations as essential promoters of lymphangiogenesis via extracellular vesicles in pancreatic cancer.

Authors:  Radu Pirlog; George A Calin
Journal:  J Clin Invest       Date:  2022-07-15       Impact factor: 19.456

3.  Exploration of the System-Level Mechanisms of the Herbal Drug FDY003 for Pancreatic Cancer Treatment: A Network Pharmacological Investigation.

Authors:  Ho-Sung Lee; In-Hee Lee; Kyungrae Kang; Sang-In Park; Minho Jung; Seung Gu Yang; Tae-Wook Kwon; Dae-Yeon Lee
Journal:  Evid Based Complement Alternat Med       Date:  2022-05-10       Impact factor: 2.650

4.  KRAS mutant-driven SUMOylation controls extracellular vesicle transmission to trigger lymphangiogenesis in pancreatic cancer.

Authors:  Yuming Luo; Zhihua Li; Yao Kong; Wang He; Hanhao Zheng; Mingjie An; Yan Lin; Dingwen Zhang; Jiabin Yang; Yue Zhao; Changhao Chen; Rufu Chen
Journal:  J Clin Invest       Date:  2022-07-15       Impact factor: 19.456

5.  Transforming primary human hepatocytes into hepatocellular carcinoma with genetically defined factors.

Authors:  Zhiwu Jiang; Lin Cheng; Zhiping Wu; Linfu Zhou; Haitao Wang; Qilan Hong; Qiting Wu; Youguo Long; Yunlin Huang; Gaoqi Xu; Yao Yao; Zhaoyang Tang; Zhenfeng Zhang; Lili Yang; Wei Luo; Jie Yang; Likun Gong; Pentao Liu; Xinwen Chen; Shuzhong Cui; Qi Zhang; Yinxiong Li; Peng Li
Journal:  EMBO Rep       Date:  2022-04-19       Impact factor: 9.071

6.  Cross-talk between mutant p53 and p62/SQSTM1 augments cancer cell migration by promoting the degradation of cell adhesion proteins.

Authors:  Saptaparna Mukherjee; Martino Maddalena; YiQing Lü; Sebastien Martinez; Nishanth Belugali Nataraj; Ashish Noronha; Sansrity Sinha; Katie Teng; Victoria Cohen-Kaplan; Tamar Ziv; Sharathchandra Arandkar; Ori Hassin; Rishita Chatterjee; Anna-Chiara Pirona; Michal Shreberk-Shaked; Anat Gershoni; Yael Aylon; Zvulun Elazar; Yosef Yarden; Daniel Schramek; Moshe Oren
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-19       Impact factor: 12.779

7.  Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program.

Authors:  Kathryn T Bieging-Rolett; Alyssa M Kaiser; David W Morgens; Anthony M Boutelle; Jose A Seoane; Eric L Van Nostrand; Changyu Zhu; Shauna L Houlihan; Stephano S Mello; Brian A Yee; Jacob McClendon; Sarah E Pierce; Ian P Winters; Mengxiong Wang; Andrew J Connolly; Scott W Lowe; Christina Curtis; Gene W Yeo; Monte M Winslow; Michael C Bassik; Laura D Attardi
Journal:  Mol Cell       Date:  2020-11-05       Impact factor: 17.970

8.  Alternative splicing redefines landscape of commonly mutated genes in acute myeloid leukemia.

Authors:  Osvaldo D Rivera; Michael J Mallory; Mathieu Quesnel-Vallières; Rakesh Chatrikhi; David C Schultz; Martin Carroll; Yoseph Barash; Sara Cherry; Kristen W Lynch
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-13       Impact factor: 11.205

Review 9.  The Function of the Mutant p53-R175H in Cancer.

Authors:  Yen-Ting Chiang; Yi-Chung Chien; Yu-Heng Lin; Hui-Hsuan Wu; Dung-Fang Lee; Yung-Luen Yu
Journal:  Cancers (Basel)       Date:  2021-08-13       Impact factor: 6.639

Review 10.  Drivers of Gene Expression Dysregulation in Pancreatic Cancer.

Authors:  Swati Venkat; Abdulrahman A Alahmari; Michael E Feigin
Journal:  Trends Cancer       Date:  2021-02-19
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