Literature DB >> 32545224

Group Testing-Based Robust Algorithm for Diagnosis of COVID-19.

Jin-Taek Seong1.   

Abstract

At the time of writing, the COVID-19 infection is spreading rapidly. Currently, there is no vaccine or treatment, and researchers around the world are attempting to fight the infection. In this paper, we consider a diagnosis method for COVID-19, which is characterized by a very rapid rate of infection and is widespread. A possible method for avoiding severe infections is to stop the spread of the infection in advance by the prompt and accurate diagnosis of COVID-19. To this end, we exploit a group testing (GT) scheme, which is used to find a small set of confirmed cases out of a large population. For the accurate detection of false positives and negatives, we propose a robust algorithm (RA) based on the maximum a posteriori probability (MAP). The key idea of the proposed RA is to exploit iterative detection to propagate beliefs to neighbor nodes by exchanging marginal probabilities between input and output nodes. As a result, we show that our proposed RA provides the benefit of being robust against noise in the GT schemes. In addition, we demonstrate the performance of our proposal with a number of tests and successfully find a set of infected samples in both noiseless and noisy GT schemes with different COVID-19 incidence rates.

Entities:  

Keywords:  COVID-19; diagnosis; group testing; posterior probability; robust algorithm

Year:  2020        PMID: 32545224      PMCID: PMC7345105          DOI: 10.3390/diagnostics10060396

Source DB:  PubMed          Journal:  Diagnostics (Basel)        ISSN: 2075-4418


  1 in total

1.  Interpretation of pooling experiments using the Markov chain Monte Carlo method.

Authors:  E Knill; A Schliep; D C Torney
Journal:  J Comput Biol       Date:  1996       Impact factor: 1.479

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1.  A Compressed Sensing Approach to Pooled RT-PCR Testing for COVID-19 Detection.

Authors:  Sabyasachi Ghosh; Rishi Agarwal; Mohammad Ali Rehan; Shreya Pathak; Pratyush Agarwal; Yash Gupta; Sarthak Consul; Nimay Gupta; Ritesh Goenka; Ajit Rajwade; Manoj Gopalkrishnan
Journal:  IEEE Open J Signal Process       Date:  2021-04-27
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