Literature DB >> 32544330

Structure and Dynamics of N-Glycosylated Human Ribonuclease 1.

Henry R Kilgore1, Andrew P Latham1, Valerie T Ressler1, Bin Zhang1, Ronald T Raines1.   

Abstract

Glycosylation is a common modification that can endow proteins with altered physical and biological properties. Ribonuclease 1 (RNase 1), which is the human homologue of the archetypal enzyme RNase A, undergoes N-linked glycosylation at asparagine residues 34, 76, and 88. We have produced the three individual glycoforms that display the core heptasaccharide, Man5GlcNAc2, and analyzed the structure of each glycoform by using small-angle X-ray scattering along with molecular dynamics simulations. The glycan on Asn34 is relatively compact and rigid, donates hydrogen bonds that "cap" the carbonyl groups at the C-terminus of an α-helix, and enhances protein thermostability. In contrast, the glycan on Asn88 is flexible and can even enter the enzymic active site, hindering catalysis. The N-glycosylation of Asn76 has less pronounced consequences. These data highlight the diverse behaviors of Man5GlcNAc2 pendants and provide a structural underpinning to the functional consequences of protein glycosylation.

Entities:  

Year:  2020        PMID: 32544330      PMCID: PMC7483697          DOI: 10.1021/acs.biochem.0c00191

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  69 in total

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Journal:  Biochemistry       Date:  1994-01-11       Impact factor: 3.162

4.  MDAnalysis: a toolkit for the analysis of molecular dynamics simulations.

Authors:  Naveen Michaud-Agrawal; Elizabeth J Denning; Thomas B Woolf; Oliver Beckstein
Journal:  J Comput Chem       Date:  2011-04-15       Impact factor: 3.376

Review 5.  N-linked oligosaccharides as outfitters for glycoprotein folding, form and function.

Authors:  Nivedita Mitra; Sharmistha Sinha; Thirumalai N C Ramya; Avadhesha Surolia
Journal:  Trends Biochem Sci       Date:  2006-02-10       Impact factor: 13.807

6.  Heterogeneity in the glycosylation pattern of human pancreatic ribonuclease.

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Journal:  Biol Chem Hoppe Seyler       Date:  1994-05

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Authors:  Robert W Newberry; Ronald T Raines
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Review 8.  Biological roles of glycans.

Authors:  Ajit Varki
Journal:  Glycobiology       Date:  2016-08-24       Impact factor: 4.313

9.  N-glycan microheterogeneity regulates interactions of plasma proteins.

Authors:  Di Wu; Weston B Struwe; David J Harvey; Michael A J Ferguson; Carol V Robinson
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-15       Impact factor: 11.205

Review 10.  Evolving SAXS versatility: solution X-ray scattering for macromolecular architecture, functional landscapes, and integrative structural biology.

Authors:  Chris A Brosey; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2019-06-13       Impact factor: 6.809

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  3 in total

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Journal:  Crit Rev Biochem Mol Biol       Date:  2021-12-09       Impact factor: 8.697

3.  Human ribonuclease 1 serves as a secretory ligand of ephrin A4 receptor and induces breast tumor initiation.

Authors:  Heng-Huan Lee; Ying-Nai Wang; Wen-Hao Yang; Weiya Xia; Yongkun Wei; Li-Chuan Chan; Yu-Han Wang; Zhou Jiang; Shouping Xu; Jun Yao; Yufan Qiu; Yi-Hsin Hsu; Wei-Lun Hwang; Meisi Yan; Jong-Ho Cha; Jennifer L Hsu; Jia Shen; Yuanqing Ye; Xifeng Wu; Ming-Feng Hou; Lin-Ming Tseng; Shao-Chun Wang; Mei-Ren Pan; Chin-Hua Yang; Yuan-Liang Wang; Hirohito Yamaguchi; Da Pang; Gabriel N Hortobagyi; Dihua Yu; Mien-Chie Hung
Journal:  Nat Commun       Date:  2021-05-13       Impact factor: 14.919

  3 in total

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