| Literature DB >> 32537819 |
Jinju Dong1, Qinghong Zhou1, Jinxiu Wang1, Yangqing Lu1, Jun Li1, Lijun Wang2,3, Lingyun Wang1,2,3, Peng Meng2,3, Fei Li1, Hongmei Zhou1, Congli Liu1, Ting Wang1, Juan Wang1, Yi Mi1, Wang-Yang Xu2,3, Jie Deng1.
Abstract
BACKGROUND: The prevalence of vitamin D deficiency and insufficiency is extremely high in pregnant women worldwide. However, the association between single nucleotide polymorphisms (SNPs) in vitamin D metabolic pathway genes and 25-hydroxyvitamin D (25(OH)D) concentration among Chinese pregnant women is seldom reported. The risk of adverse neonatal outcomes due to maternal vitamin D deficiency has not been well investigated.Entities:
Keywords: 25(OH)D; SNP; birthweight; pregnant women
Mesh:
Substances:
Year: 2020 PMID: 32537819 PMCID: PMC7521226 DOI: 10.1002/jcla.23376
Source DB: PubMed Journal: J Clin Lab Anal ISSN: 0887-8013 Impact factor: 2.352
Association between SNPs and serum 25(OH)D levels
| Genotype | n |
25(OH)D levels (ng/mL) (mean ± SD) |
|
|---|---|---|---|
|
| |||
| rs17467825 | |||
| AA | 418 | 16.63 ± 8.10 | AA:AG .003 |
| AG | 324 | 15.09 ± 7.97 | AG:GG .029 |
| GG | 73 | 12.80 ± 6.40 | AA:GG .000 |
| rs4588 | |||
| GG | 409 | 16.83 ± 8.07 | GG:GT .000 |
| GT | 334 | 14.85 ± 7.89 | GT:TT .048 |
| TT | 72 | 12.92 ± 6.71 | GG:TT .000 |
| rs2298850 | |||
| GG | 401 | 16.84 ± 8.20 | GG:GC .000 |
| GC | 338 | 14.89 ± 7.79 | GC:CC .047 |
| CC | 76 | 13.01 ± 6.67 | GG:CC .000 |
| rs2282679 | |||
| TT | 482 | 16.30 ± 8.02 | TT:TG .024 |
| TG | 270 | 15.20 ± 8.12 | TG:GG .050 |
| GG | 63 | 12.89 ± 6.38 | TT:GG .024 |
| rs1155563 | |||
| TT | 223 | 16.59 ± 7.81 | TT:TC .122 |
| TC | 431 | 15.88 ± 8.21 | TC:CC .005 |
| CC | 161 | 13.86 ± 7.38 | TT:CC .000 |
Statistically significant difference set at .05, Kruskal‐Wallis H test.
General characteristics of the participants
| Variables | n (%) | Mean ± SD |
|---|---|---|
| Total pregnancy women | 815 (100.00) | |
| 25(OH)D (ng/mL) | ||
| <10 | 219 (26.87) | 15.67 ± 7.98 |
| 10‐19.9 | 392 (48.10) | |
| 20‐29.9 | 154 (18.90) | |
| ≥30 | 50 (6.13) | |
| Age, years | ||
| 0‐25 | 182 (22.33) | 28.19 ± 3.86 |
| 26‐30 | 467 (57.30) | |
| 31‐35 | 130 (15.95) | |
| >35 | 36 (4.42) | |
| Gestational week, weeks | ||
| ≤12 | 179 (21.96) | 14.84 ± 2.43 |
| 13‐27 | 632 (77.55) | |
| ≥28 | 4 (0.49) | |
| Pre‐pregnancy BMI, kg/m2 | ||
| <18.5 | 67 (8.22) | 22.16 ± 3.24 |
| 18.5‐23.9 | 575 (70.55) | |
| 24‐27.9 | 137 (16.81) | |
| ≥28 | 36 (4.42) | |
| Physical activity (times/wk) | ||
| ≤4 | 632 (77.55) | 2.88 ± 4.13 |
| >4 | 183 (22.45) | |
| Sun exposure (h/wk) | ||
| ≤3 | 800 (98.16) | 0.60 ± 0.86 |
| >3 | 15 (1.84) | |
| Sampling season | ||
| Winter | 650 (79.75) | |
| Spring | 165 (20.25) | |
| Smoker | ||
| Yes | 0 (0.00) | |
| No | 816 (100.00) | |
| Drinker | ||
| Yes | 801 (98.28) | |
| No | 14 (1.72) | |
| Vitamin D supplementation | ||
| Yes | 97 (11.90) | |
| No | 718 (88.10) | |
| Total infants | 407 (100) | |
| Infant weight (g) | ||
| <4000 | 391 (96.07) | 3231.05 ± 474.65 |
| ≥4000 | 16 (3.93) | |
| Infant length (cm) | 49.34 ± 1.83 | |
| Femur length (cm) | 7.41 ± 0.36 | |
Abbreviations: BMI, body mass index; SD, standard deviation.
FIGURE 1Distribution of 25‐hydroxyvitamin D (25(OH)D) concentration in total study population. The proportion of pregnant women with different 25(OH)D concentration was shown in the pie chart
Serum 25(OH)D concentration in participants according to their characteristics
| Variables |
25(OH)D concentration (ng/mL) (mean ± SD) |
|
|---|---|---|
| Age (y) | ||
| 0‐25 | 15.24 ± 7.70 | .0647 |
| 26‐30 | 15.61 ± 8.23 | |
| 31‐35 | 16.95 ± 7.73 | |
| >35 | 14.12 ± 6.83 | |
| Gestational week (wk) | ||
| ≤12 | 16.29 ± 8.28 | .4230 |
| 13‐27 | 15.52 ± 7.92 | |
| ≥28 | 12.38 ± 4.36 | |
| Pre‐pregnancy BMI (kg/m2) | ||
| <18.5 | 16.18 ± 8.26 | .9465 |
| 18.5‐24 | 15.75 ± 8.13 | |
| 24.1‐28.9 | 15.19 ± 7.27 | |
| ≥29 | 15.40 ± 8.01 | |
| Physical activity (times/wk) | ||
| ≤4 | 15.41 ± 7.85 | .0524 |
| >4 | 16.42 ± 8.39 | |
| Sun exposure (h/wk) | ||
| ≤3 | 15.60 ± 7.96 | .0419 |
| >3 | 19.74 ± 8.74 | |
| Sampling season | ||
| Winter | 16.14 ± 8.01 | .0007 |
| Spring | 13.80 ± 7.57 | |
| Vitamin D intake | ||
| Yes | 17.15 ± 8.07 | .0354 |
| No | 15.47 ± 7.96 | |
Represented statistically significant difference (Bonferroni‐adjusted), Kruskal‐Wallis H test. For “age” and “pre‐pregnancy BMI,” statistically significant difference set as .008; “gestational week,” statistically significant difference set as .017; others, statistically significant difference set as .05.
FIGURE 2The association of rs17467825, rs4588, rs2282679, and rs2298850 with 25‐hydroxyvitamin D (25(OH)D) concentration modified by vitamin D supplementation and sun exposure. Total serum 25(OH)D and (A), rs17467825 (B), rs4588 (C), rs2282679 (D), and rs2298850 exhibited interactions among SNPs with or without vitamin D supplementation and sun exposure. The top row represented the correlation between 25(OH)D concentration and alleles in response to vitamin D intake. The middle row represented the correlation between 25(OH)D concentration and alleles in response to sun exposure time. The bottom row represented the correlation between 25(OH)D concentration and alleles in response to sun exposure time when vitamin D is not supplemented. *, p<0.05; **, p<0.01; ***, p<0.001
FIGURE 3An XGBoost model of monitoring 25‐hydroxyvitamin D concentration among pregnancy women. The AUC was 0.828 in the training set (n = 733) and 0.807 in the test set (n = 82)
Clinical application of the model
| Score | Genetic risk | Clinical recommendations |
|---|---|---|
| 0.71‐1.0 | High | Adjust the supplementary dose and sunshine duration according to the model |
| 0.51‐0.7 | Medium‐high | Detect 25(OH)D concentration and adjust the supplementary dose and sunshine duration according to the model |
| 0.31‐0.5 | Medium | Monitor 25(OH)D concentration and prevent 25(OH)D deficiency |
| 0.0‐0.3 | Low | Monitor 25(OH)D concentration |
SNPs, age, sun exposure, vitamin D intake, gestational week, and physical activity were put in the model as variables