Literature DB >> 32537803

Vibrio natriegens: an ultrafast-growing marine bacterium as emerging synthetic biology chassis.

Josef Hoff1,2, Benjamin Daniel2,3, Daniel Stukenberg2, Benjamin W Thuronyi4, Torsten Waldminghaus5,6, Georg Fritz1.   

Abstract

The marine bacterium Vibrio natriegens is the fastest-growing non-pathogenic bacterium known to date and is gaining more and more attention as an alternative chassis organism to Escherichia coli. A recent wave of synthetic biology efforts has focused on the establishment of molecular biology tools in this fascinating organism, now enabling exciting applications - from speeding up our everyday laboratory routines to increasing the pace of biotechnological production cycles. In this review, we seek to give a broad overview on the literature on V. natriegens, spanning all the way from its initial isolation to its latest applications. We discuss its natural ecological niche and interactions with other organisms, unveil some of its extraordinary traits, review its genomic organization and give insight into its diverse metabolism - key physiological insights required to further develop this organism into a synthetic biology chassis. By providing a comprehensive overview on the established genetic tools, methods and applications we highlight the current possibilities of this organism, but also identify some of the gaps that could drive future lines of research, hopefully stimulating the growth of the V. natriegens research community.
© 2020 Society for Applied Microbiology and John Wiley & Sons Ltd.

Entities:  

Year:  2020        PMID: 32537803     DOI: 10.1111/1462-2920.15128

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  17 in total

1.  A Vibrio-based microbial platform for accelerated lignocellulosic sugar conversion.

Authors:  Sunghwa Woo; Hyun Gyu Lim; Yong Hee Han; Sungwoo Park; Myung Hyun Noh; Dongyeop Baek; Jo Hyun Moon; Sang Woo Seo; Gyoo Yeol Jung
Journal:  Biotechnol Biofuels Bioprod       Date:  2022-05-25

2.  Overexpression of recombinant proteins containing non-canonical amino acids in Vibrio natriegens: p-azido-L-phenylalanine as coupling site for 19F-tags.

Authors:  Karina A Stadler; Walter Becker; Barbara Darnhofer; Ruth Birner-Gruenberger; Klaus Zangger
Journal:  Amino Acids       Date:  2022-04-13       Impact factor: 3.789

3.  Genetic Code Expansion of Vibrio natriegens.

Authors:  Eden Ozer; Lital Alfonta
Journal:  Front Bioeng Biotechnol       Date:  2021-02-26

4.  Engineering Vibrio sp. SP1 for the production of carotenoids directly from brown macroalgae.

Authors:  Sungwoo Park; Sung Won Cho; Yungyu Lee; Mincheol Choi; Jina Yang; Hojun Lee; Sang Woo Seo
Journal:  Comput Struct Biotechnol J       Date:  2021-03-10       Impact factor: 7.271

5.  Engineering a customizable antibacterial T6SS-based platform in Vibrio natriegens.

Authors:  Biswanath Jana; Kinga Keppel; Dor Salomon
Journal:  EMBO Rep       Date:  2021-09-08       Impact factor: 8.807

6.  Synthetic biology tools for engineering Goodwin oscillation in Trypanosoma brucei brucei.

Authors:  Yanika Borg; Sam Alsford; Vasos Pavlika; Alexei Zaikin; Darren N Nesbeth
Journal:  Heliyon       Date:  2022-02-03

7.  Identification and Cross-Characterisation of Artificial Promoters and 5' Untranslated Regions in Vibrio natriegens.

Authors:  Lisa Tietze; Antonia Mangold; Maria W Hoff; Rahmi Lale
Journal:  Front Bioeng Biotechnol       Date:  2022-01-27

8.  Biodegradation of aromatic pollutants meets synthetic biology.

Authors:  Liang Xiang; Guoqiang Li; Luan Wen; Cong Su; Yong Liu; Hongzhi Tang; Junbiao Dai
Journal:  Synth Syst Biotechnol       Date:  2021-07-01

9.  Vibrionaceae core, shell and cloud genes are non-randomly distributed on Chr 1: An hypothesis that links the genomic location of genes with their intracellular placement.

Authors:  Cecilie Bækkedal Sonnenberg; Tim Kahlke; Peik Haugen
Journal:  BMC Genomics       Date:  2020-10-06       Impact factor: 3.969

Review 10.  Advances in Biosynthesis of Natural Products from Marine Microorganisms.

Authors:  Quan Zhou; Kinya Hotta; Yaming Deng; Rui Yuan; Shu Quan; Xi Chen
Journal:  Microorganisms       Date:  2021-12-10
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