Literature DB >> 33718334

Genetic Code Expansion of Vibrio natriegens.

Eden Ozer1, Lital Alfonta1.   

Abstract

Escherichia coli has been considered as the most used model bacteria in the majority of studies for several decades. However, a new, faster chassis for synthetic biology is emerging in the form of the fast-growing gram-negative bacterium Vibrio natriegens. Different methodologies, well established in E. coli, are currently being adapted for V. natriegens in the hope to enable a much faster platform for general molecular biology studies. Amongst the vast technologies available for E. coli, genetic code expansion, the incorporation of unnatural amino acids into proteins, serves as a robust tool for protein engineering and biorthogonal modifications. Here we designed and adapted the genetic code expansion methodology for V. natriegens and demonstrate an unnatural amino acid incorporation into a protein for the first time in this organism.
Copyright © 2021 Ozer and Alfonta.

Entities:  

Keywords:  Vibrio natriegens; genetic code expansion; propargyl-L-lysine; synthetic biology; unnatural amino acids

Year:  2021        PMID: 33718334      PMCID: PMC7953155          DOI: 10.3389/fbioe.2021.594429

Source DB:  PubMed          Journal:  Front Bioeng Biotechnol        ISSN: 2296-4185


  24 in total

1.  Click Chemistry: Diverse Chemical Function from a Few Good Reactions.

Authors:  Hartmuth C. Kolb; M. G. Finn; K. Barry Sharpless
Journal:  Angew Chem Int Ed Engl       Date:  2001-06-01       Impact factor: 15.336

Review 2.  Expanding the genetic code of mammalian cells.

Authors:  James S Italia; Yunan Zheng; Rachel E Kelemen; Sarah B Erickson; Partha S Addy; Abhishek Chatterjee
Journal:  Biochem Soc Trans       Date:  2017-04-15       Impact factor: 5.407

3.  Tuning of Recombinant Protein Expression in Escherichia coli by Manipulating Transcription, Translation Initiation Rates, and Incorporation of Noncanonical Amino Acids.

Authors:  Orr Schlesinger; Yonatan Chemla; Mathias Heltberg; Eden Ozer; Ryan Marshall; Vincent Noireaux; Mogens Høgh Jensen; Lital Alfonta
Journal:  ACS Synth Biol       Date:  2017-03-09       Impact factor: 5.110

4.  In vitro suppression of two different stop codons.

Authors:  Eden Ozer; Yonatan Chemla; Orr Schlesinger; Haim Yuval Aviram; Inbal Riven; Gilad Haran; Lital Alfonta
Journal:  Biotechnol Bioeng       Date:  2016-11-28       Impact factor: 4.530

5.  Expanding the Genetic Code of a Photoautotrophic Organism.

Authors:  Yonatan Chemla; Mor Friedman; Mathias Heltberg; Anna Bakhrat; Elad Nagar; Rakefet Schwarz; Mogens Høgh Jensen; Lital Alfonta
Journal:  Biochemistry       Date:  2017-04-12       Impact factor: 3.162

6.  Vibrio natriegens as a fast-growing host for molecular biology.

Authors:  Matthew T Weinstock; Eric D Hesek; Christopher M Wilson; Daniel G Gibson
Journal:  Nat Methods       Date:  2016-08-29       Impact factor: 28.547

7.  Expanding the genetic code of an animal.

Authors:  Sebastian Greiss; Jason W Chin
Journal:  J Am Chem Soc       Date:  2011-08-22       Impact factor: 15.419

8.  Expanding the genetic code of Salmonella with non-canonical amino acids.

Authors:  Qinglei Gan; Brent P Lehman; Thomas A Bobik; Chenguang Fan
Journal:  Sci Rep       Date:  2016-12-23       Impact factor: 4.379

Review 9.  Designing logical codon reassignment - Expanding the chemistry in biology.

Authors:  Anaëlle Dumas; Lukas Lercher; Christopher D Spicer; Benjamin G Davis
Journal:  Chem Sci       Date:  2014-07-14       Impact factor: 9.825

10.  Vibrio natriegens as Host for Expression of Multisubunit Membrane Protein Complexes.

Authors:  Lena Schleicher; Valentin Muras; Björn Claussen; Jens Pfannstiel; Bastian Blombach; Pavel Dibrov; Günter Fritz; Julia Steuber
Journal:  Front Microbiol       Date:  2018-10-25       Impact factor: 5.640

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  2 in total

1.  Overexpression of recombinant proteins containing non-canonical amino acids in Vibrio natriegens: p-azido-L-phenylalanine as coupling site for 19F-tags.

Authors:  Karina A Stadler; Walter Becker; Barbara Darnhofer; Ruth Birner-Gruenberger; Klaus Zangger
Journal:  Amino Acids       Date:  2022-04-13       Impact factor: 3.789

2.  An inside look at a biofilm: Pseudomonas aeruginosa flagella biotracking.

Authors:  Eden Ozer; Karin Yaniv; Einat Chetrit; Anastasya Boyarski; Michael M Meijler; Ronen Berkovich; Ariel Kushmaro; Lital Alfonta
Journal:  Sci Adv       Date:  2021-06-11       Impact factor: 14.136

  2 in total

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