Literature DB >> 32533776

Subgingival microbiome and clinical periodontal status in an elderly cohort: The WHICAP ancillary study of oral health.

Panos N Papapanou1, Heekuk Park2, Bin Cheng3, Alexis Kokaras4, Bruce Paster4, Sandra Burkett1, Caitlin Wei-Ming Watson5, Medini K Annavajhala2, Anne-Catrin Uhlemann2, James M Noble5,6.   

Abstract

BACKGROUND: There is a sparsity of data describing the periodontal microbiome in elderly individuals. We analyzed the association of subgingival bacterial profiles and clinical periodontal status in a cohort of participants in the Washington Heights-Inwood Columbia Aging Project (WHICAP).
METHODS: Dentate individuals underwent a full-mouth periodontal examination at six sites/tooth. Up to four subgingival plaque samples per person, each obtained from the mesio-lingual site of the most posterior tooth in each quadrant, were harvested and pooled. Periodontal status was classified according to the Centers for Disease Control/American Academy of Periodontology (CDC/AAP) criteria as well as based on the percentage of teeth/person with pockets ≥4 mm deep. Bacterial DNA was isolated and was processed and analyzed using Human Oral Microbe Identification using Next Generation Sequencing (HOMINGS). Differential abundance across the periodontal phenotypes was calculated using the R package DESeq2. α- and β-diversity metrics were calculated using DADA2-based clustering.
RESULTS: The mean age of the 739 participants was 74.5 years, and 32% were male. Several taxa including Sneathia amnii-like sp., Peptoniphilaceae [G-1] bacterium HMT 113, Porphyromonas gingivalis, Fretibacterium fastidiosum, Filifactor alocis, and Saccharibacteria (TM7) [G-1] bacterium HMT 346 were more abundant with increasing severity of periodontitis. In contrast, species such as Veillonella parvula, Veillonella dispar, Rothia dentocariosa, and Lautropia mirabilis were more abundant in health. Microbial diversity increased in parallel with the severity and extent of periodontitis.
CONCLUSIONS: The observed subgingival bacterial patterns in these elderly individuals corroborated corresponding findings in younger cohorts and were consistent with the concept that periodontitis is associated with perturbations in the resident microbiome.
© 2020 American Academy of Periodontology.

Entities:  

Keywords:  epidemiology; geriatric dentistry; microbiology; periodontitis; risk factor(s)

Mesh:

Substances:

Year:  2020        PMID: 32533776      PMCID: PMC8324315          DOI: 10.1002/JPER.20-0194

Source DB:  PubMed          Journal:  J Periodontol        ISSN: 0022-3492            Impact factor:   6.993


  45 in total

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Journal:  Neurology       Date:  2001-01-09       Impact factor: 9.910

2.  Advances in surveillance of periodontitis: the Centers for Disease Control and Prevention periodontal disease surveillance project.

Authors:  Paul I Eke; Gina Thornton-Evans; Bruce Dye; Robert Genco
Journal:  J Periodontol       Date:  2012-02-11       Impact factor: 6.993

3.  Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample.

Authors:  J Gregory Caporaso; Christian L Lauber; William A Walters; Donna Berg-Lyons; Catherine A Lozupone; Peter J Turnbaugh; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-03       Impact factor: 11.205

4.  Effect of partial recording protocols on estimates of prevalence of periodontal disease.

Authors:  Cristiano Susin; Albert Kingman; Jasim M Albandar
Journal:  J Periodontol       Date:  2005-02       Impact factor: 6.993

Review 5.  The breadth of bacterial diversity in the human periodontal pocket and other oral sites.

Authors:  Bruce J Paster; Ingar Olsen; Jørn A Aas; Floyd E Dewhirst
Journal:  Periodontol 2000       Date:  2006       Impact factor: 7.589

6.  Community-wide transcriptome of the oral microbiome in subjects with and without periodontitis.

Authors:  Ana E Duran-Pinedo; Tsute Chen; Ricardo Teles; Jacqueline R Starr; Xiaoshan Wang; Keerthana Krishnan; Jorge Frias-Lopez
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7.  Subgingival bacterial colonization profiles correlate with gingival tissue gene expression.

Authors:  Panos N Papapanou; Jan H Behle; Moritz Kebschull; Romanita Celenti; Dana L Wolf; Martin Handfield; Paul Pavlidis; Ryan T Demmer
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Review 8.  The keystone-pathogen hypothesis.

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Authors:  Dongmei Ai; Ruocheng Huang; Jin Wen; Chao Li; Jiangping Zhu; Li Charlie Xia
Journal:  BMC Genomics       Date:  2017-01-25       Impact factor: 3.969

10.  phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data.

Authors:  Paul J McMurdie; Susan Holmes
Journal:  PLoS One       Date:  2013-04-22       Impact factor: 3.240

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Review 4.  A Cross-Talk between Diet and the Oral Microbiome: Balance of Nutrition on Inflammation and Immune System's Response during Periodontitis.

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5.  Nitrite Generating and Depleting Capacity of the Oral Microbiome and Cardiometabolic Risk: Results from ORIGINS.

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6.  Replication of gene polymorphisms associated with periodontitis-related traits in an elderly cohort: the Washington Heights/Inwood Community Aging Project Ancillary Study of Oral Health.

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7.  Oral microbiome interactions with gingival gene expression patterns for apoptosis, autophagy and hypoxia pathways in progressing periodontitis.

Authors:  Jeffrey L Ebersole; Sreenatha S Kirakodu; Octavio A Gonzalez
Journal:  Immunology       Date:  2021-01-04       Impact factor: 7.397

8.  Core of the saliva microbiome: an analysis of the MG-RAST data.

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Review 9.  Cariogenic and oral health taxa in the oral cavity among children and adults: A scoping review.

Authors:  Deesha Bhaumik; Divya Manikandan; Betsy Foxman
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10.  Gingival transcriptomics of follicular T cell footprints in progressing periodontitis.

Authors:  J L Ebersole; S S Kirakodu; L Orraca; J Gonzalez Martinez; O A Gonzalez
Journal:  Clin Exp Immunol       Date:  2021-03-07       Impact factor: 5.732

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