Literature DB >> 32506803

Machine learning of diffraction image patterns for accurate classification of cells modeled with different nuclear sizes.

Jing Liu1,2, Yaohui Xu1,2, Wenjin Wang1,3, Yuhua Wen1,3, Heng Hong4, Jun Q Lu1,5, Peng Tian1,3, Xin-Hua Hu1,5.   

Abstract

Measurement of nuclear-to-cytoplasm (N:C) ratios plays an important role in detection of atypical and tumor cells. Yet, current clinical methods rely heavily on immunofluroescent staining and manual reading. To achieve the goal of rapid and label-free cell classification, realistic optical cell models (OCMs) have been developed for simulation of diffraction imaging by single cells. A total of 1892 OCMs were obtained with varied nuclear volumes and orientations to calculate cross-polarized diffraction image (p-DI) pairs divided into three nuclear size groups of OCMS , OCMO and OCML based on three prostate cell structures. Binary classifications were conducted among the three groups with image parameters extracted by the algorithm of gray-level co-occurrence matrix. The averaged accuracy of support vector machine (SVM) classifier on test dataset of p-DI was found to be 98.8% and 97.5% respectively for binary classifications of OCMS vs OCMO and OCMO vs OCML for the prostate cancer cell structure. The values remain about the same at 98.9% and 97.8% for the smaller prostate normal cell structures. The robust performance of SVM over clustering classifiers suggests that the high-order correlations of diffraction patterns are potentially useful for label-free detection of single cells with large N:C ratios.
© 2020 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  cell modeling; cytology; diffraction imaging; light scattering

Mesh:

Year:  2020        PMID: 32506803     DOI: 10.1002/jbio.202000036

Source DB:  PubMed          Journal:  J Biophotonics        ISSN: 1864-063X            Impact factor:   3.207


  2 in total

1.  Integration of light scattering with machine learning for label free cell detection.

Authors:  Wendy Yu Wan; Lina Liu; Xiaoxuan Liu; Wei Wang; Md Zahurul Islam; Chunhua Dong; Craig R Garen; Michael T Woodside; Manisha Gupta; Mrinal Mandal; Wojciech Rozmus; Ying Yin Tsui
Journal:  Biomed Opt Express       Date:  2021-05-19       Impact factor: 3.732

2.  Analysis of polarized diffraction images of human red blood cells: a numerical study.

Authors:  Wenjin Wang; Li Min; Peng Tian; Chao Wu; Jing Liu; Xin-Hua Hu
Journal:  Biomed Opt Express       Date:  2022-02-03       Impact factor: 3.732

  2 in total

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