| Literature DB >> 32501580 |
Daisuke Koshiyama1, Kenichiro Miura2, Kiyotaka Nemoto3, Naohiro Okada1,4, Junya Matsumoto2, Masaki Fukunaga5, Ryota Hashimoto2.
Abstract
Reproducibility is one of the most important issues for generalizing the results of clinical research; however, low reproducibility in neuroimaging studies is well known. To overcome this problem, the Enhancing Neuroimaging Genetics through Meta-Analysis (ENIGMA) consortium, an international neuroimaging consortium, established standard protocols for imaging analysis and employs either meta- and mega-analyses of psychiatric disorders with large sample sizes. The Cognitive Genetics Collaborative Research Organization (COCORO) in Japan promotes neurobiological studies in psychiatry and has successfully replicated and extended works of ENIGMA especially for neuroimaging studies. For example, (a) the ENIGMA consortium showed subcortical regional volume alterations in patients with schizophrenia (n = 2,028) compared to controls (n = 2,540) across 15 cohorts using meta-analysis. COCORO replicated the volumetric changes in patients with schizophrenia (n = 884) compared to controls (n = 1,680) using the ENIGMA imaging analysis protocol and mega-analysis. Furthermore, a schizophrenia-specific leftward asymmetry for the pallidum volume was demonstrated; and (b) the ENIGMA consortium identified white matter microstructural alterations in patients with schizophrenia (n = 1,963) compared to controls (n = 2,359) across 29 cohorts. Using the ENIGMA protocol, a study from COCORO showed similar results in patients with schizophrenia (n = 696) compared to controls (n = 1,506) from 12 sites using mega-analysis. Moreover, the COCORO study found that schizophrenia, bipolar disorder (n = 211) and autism spectrum disorder (n = 126), but not major depressive disorder (n = 398), share similar white matter microstructural alterations, compared to controls. Further replication and harmonization of the ENIGMA consortium and COCORO will contribute to the generalization of their research findings.Entities:
Keywords: magnetic resonance imaging (MRI); mega-analysis; meta-analysis; neuroimaging; psychiatric disorders; reproducibility; schizophrenia
Mesh:
Year: 2020 PMID: 32501580 PMCID: PMC8675417 DOI: 10.1002/hbm.25040
Source DB: PubMed Journal: Hum Brain Mapp ISSN: 1065-9471 Impact factor: 5.038
Comparison of imaging methodologies employed in the Enhancing Neuroimaging Genetics through Meta‐Analysis (ENIGMA) consortium and in the Cognitive Genetics Collaborative Research Organization (COCORO)
| General meta‐analysis study | ENIGMA consortium | COCORO | |
|---|---|---|---|
| Method | Meta‐analysis | Meta‐analysis/mega‐analysis | Mega‐analysis |
| Ethics | Individual institute | Individual institute | Central |
| Sample size | Medium | Large | Medium |
| Nationality | — | Multiple (worldwide) | Single (Japanese) |
| Quality assurance/analysis | |||
| T1‐weighted MRI/DTI check | Individual institute | Individual institute | Central |
| Converting from DICOM to NIFTI | Individual institute | Individual institute | Central/individual institute |
| Imaging analysis protocol | Separate protocol | Common protocol | Common protocol |
| Execution of imaging analysis | Individual institute | Individual institute | Central |
| Analyzed individual data check | Individual institute | Individual institute/central | Central |
| Analyzed group level data check | Individual institute | Central | Central |
| Available disorder data | — | Schizophrenia, bipolar disorder, major depressive disorder, autism spectrum disorder (ASD), attention‐deficit/hyperactivity disorder (ADHD), epilepsy, human immunodeficiency virus/acquired immunodeficiency syndrome (HIV/AIDS), Parkinson's disease, addiction, post‐traumatic stress disorder (PTSD), stroke recovery, obsessive‐compulsive disorder (OCD), 22q11.2 deletion syndrome, eating disorder | Schizophrenia, bipolar disorder, major depressive disorder, autism spectrum disorder (ASD) |
Abbreviations: DTI, diffusion tensor imaging; MRI, magnetic resonance imaging.
In COCORO, most data was converted from DICOM to NIFTI at central; however, some data was converted at individual institutes.
Imaging analysis of FreeSurfer for structural MRI and DTI analysis was done using ENIGMA standard protocols; the same hardware was used for the execution of imaging analysis throughout each project in COCORO.
Data was checked using for example, histogram.
FIGURE 1Institutions of the Cognitive Genetics Collaborative Research Organization (COCORO). The Cognitive Genetics Collaborative Research Organization (COCORO) consists of many psychiatric facilities in Japan. COCORO means “Mind” in Japanese. There are 39 institutes participating in COCORO. The purpose of COCORO is to elucidate the mechanisms of psychiatric disorders and brain functions. Abbreviations: Med, Medical; NCNP, National Center of Neurology and Psychiatry; NIPS, National Institute for Physiological Sciences; Psy Cen, Psychiatric Center; QST, National Institutes for Quantum and Radiological Science and Technology; Riken BSI, Riken Brain Science Institute; Tokyo Metro Inst, Tokyo Metropolitan Institute of Medical Science; Univ, University; UOEH, University of Occupational and Environmental Health
Available research resource database of human brain phenotypes in the Human Brain Phenotype Consortium (HBPC)
| Categories | Contents |
|---|---|
| Research resource | Deoxyribonucleic acid (DNA), plasma, blood ribonucleic acid (RNA), Lymphoblastoid cell line, induced pluripotent stem (iPS) cells |
| Neurocognitive battery | Intelligence quotient (IQ), working memory, verbal memory, visual memory, executive function, verbal fluency, vigilance, facial cognition, social cognition |
| Neuroimaging | Three‐dimensional brain morphology, diffusion tensor imaging (DTI), resting‐state functional magnetic resonance imaging (MRI) |
| Neurophysiology | Eye movement, prepulse inhibition (PPI), electroencephalography (EEG) |
| Personality | Temperament and character inventory (TCI), schizotypal personality questionnaire (SPQ), the autism‐spectrum quotient (AQ) |
FIGURE 2Development of the Enhancing Neuroimaging Genetics through Meta‐Analysis (ENIGMA) consortium studies in the Cognitive Genetics Collaborative Research Organization (COCORO)