Literature DB >> 32499964

Correction propagation for user-assisted optical coherence tomography segmentation: general framework and application to Bruch's membrane segmentation.

Daniel Stromer1,2,3, Eric M Moult1,3, Siyu Chen1, Nadia K Waheed4, Andreas Maier2, James G Fujimoto1.   

Abstract

Optical coherence tomography (OCT) is a commonly used ophthalmic imaging modality. While OCT has traditionally been viewed cross-sectionally (i.e., as a sequence of B-scans), higher A-scan rates have increased interest in en face OCT visualization and analysis. The recent clinical introduction of OCT angiography (OCTA) has further spurred this interest, with chorioretinal OCTA being predominantly displayed via en face projections. Although en face visualization and quantitation are natural for many retinal features (e.g., drusen and vasculature), it requires segmentation. Because manual segmentation of volumetric OCT data is prohibitively laborious in many settings, there has been significant research and commercial interest in developing automatic segmentation algorithms. While these algorithms have achieved impressive results, the variability of image qualities and the variety of ocular pathologies cause even the most robust automatic segmentation algorithms to err. In this study, we develop a user-assisted segmentation approach, complementary to fully-automatic methods, wherein correction propagation is used to reduce the burden of manually correcting automatic segmentations. The approach is evaluated for Bruch's membrane segmentation in eyes with advanced age-related macular degeneration.
© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Entities:  

Year:  2020        PMID: 32499964      PMCID: PMC7249839          DOI: 10.1364/BOE.392759

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  29 in total

1.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

2.  A combined machine-learning and graph-based framework for the segmentation of retinal surfaces in SD-OCT volumes.

Authors:  Bhavna J Antony; Michael D Abràmoff; Matthew M Harper; Woojin Jeong; Elliott H Sohn; Young H Kwon; Randy Kardon; Mona K Garvin
Journal:  Biomed Opt Express       Date:  2013-11-01       Impact factor: 3.732

3.  Deep learning based retinal OCT segmentation.

Authors:  M Pekala; N Joshi; T Y Alvin Liu; N M Bressler; D Cabrera DeBuc; P Burlina
Journal:  Comput Biol Med       Date:  2019-09-17       Impact factor: 4.589

4.  Automated geographic atrophy segmentation for SD-OCT images using region-based C-V model via local similarity factor.

Authors:  Sijie Niu; Luis de Sisternes; Qiang Chen; Theodore Leng; Daniel L Rubin
Journal:  Biomed Opt Express       Date:  2016-01-20       Impact factor: 3.732

5.  ReLayNet: retinal layer and fluid segmentation of macular optical coherence tomography using fully convolutional networks.

Authors:  Abhijit Guha Roy; Sailesh Conjeti; Sri Phani Krishna Karri; Debdoot Sheet; Amin Katouzian; Christian Wachinger; Nassir Navab
Journal:  Biomed Opt Express       Date:  2017-07-13       Impact factor: 3.732

6.  Optical Coherence Tomography Angiography of Asymptomatic Neovascularization in Intermediate Age-Related Macular Degeneration.

Authors:  Luiz Roisman; Qinqin Zhang; Ruikang K Wang; Giovanni Gregori; Anqi Zhang; Chieh-Li Chen; Mary K Durbin; Lin An; Paul F Stetson; Gillian Robbins; Andrew Miller; Fang Zheng; Philip J Rosenfeld
Journal:  Ophthalmology       Date:  2016-02-12       Impact factor: 12.079

7.  Automated segmentation of the choroid in EDI-OCT images with retinal pathology using convolution neural networks.

Authors:  Min Chen; Jiancong Wang; Ipek Oguz; Brian L VanderBeek; James C Gee
Journal:  Fetal Infant Ophthalmic Med Image Anal (2017)       Date:  2017-09-09

Review 8.  Optical coherence tomography angiography: A comprehensive review of current methods and clinical applications.

Authors:  Amir H Kashani; Chieh-Li Chen; Jin K Gahm; Fang Zheng; Grace M Richter; Philip J Rosenfeld; Yonggang Shi; Ruikang K Wang
Journal:  Prog Retin Eye Res       Date:  2017-07-29       Impact factor: 21.198

9.  An automated framework for 3D serous pigment epithelium detachment segmentation in SD-OCT images.

Authors:  Zhuli Sun; Haoyu Chen; Fei Shi; Lirong Wang; Weifang Zhu; Dehui Xiang; Chenglin Yan; Liang Li; Xinjian Chen
Journal:  Sci Rep       Date:  2016-02-22       Impact factor: 4.379

10.  Retinal layer segmentation of macular OCT images using boundary classification.

Authors:  Andrew Lang; Aaron Carass; Matthew Hauser; Elias S Sotirchos; Peter A Calabresi; Howard S Ying; Jerry L Prince
Journal:  Biomed Opt Express       Date:  2013-06-14       Impact factor: 3.732

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  1 in total

1.  Depth-resolved visualization and automated quantification of hyperreflective foci on OCT scans using optical attenuation coefficients.

Authors:  Hao Zhou; Jeremy Liu; Rita Laiginhas; Qinqin Zhang; Yuxuan Cheng; Yi Zhang; Yingying Shi; Mengxi Shen; Giovanni Gregori; Philip J Rosenfeld; Ruikang K Wang
Journal:  Biomed Opt Express       Date:  2022-07-07       Impact factor: 3.562

  1 in total

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