Jose D Alcantara1, Robert S Eisinger2, Enrico Opri3, Madison Kelberman3, Jackson N Cagle3, Julieth Gomez3, Kelly D Foote4, Michael S Okun5, Aysegul Gunduz6. 1. J. Crayton Pruitt Department of Biomedical Engineering, University of Florida, Gainesville, FL, United States. Electronic address: jose.alcantara@ufl.edu. 2. Department of Neuroscience, University of Florida, Gainesville, FL, United States. 3. J. Crayton Pruitt Department of Biomedical Engineering, University of Florida, Gainesville, FL, United States. 4. Department of Neurology, Norman Fixel Institute for Neurological Diseases, University of Florida, Gainesville, FL, United States; Department of Neurosurgery, Norman Fixel Institute for Neurological Diseases, University of Florida, Gainesville, FL, United States. 5. Department of Neuroscience, University of Florida, Gainesville, FL, United States; Department of Neurology, Norman Fixel Institute for Neurological Diseases, University of Florida, Gainesville, FL, United States. 6. J. Crayton Pruitt Department of Biomedical Engineering, University of Florida, Gainesville, FL, United States; Department of Neuroscience, University of Florida, Gainesville, FL, United States.
Abstract
BACKGROUND: Accurate interpretation of electrophysiological data in cognitive and behavioral experiments requires the acquisition of time labels, such as marking the exact start of a condition or moment a stimulus is presented to a research subject. NEW METHOD: Here we present an inexpensive (∼30 USD) device used as a central relay for multiple peripheral devices, such as a computer screen presenting an experiment, a pressure-sensor push button, a multi-button responder, a pulse oximeter sensor, a light-emitting diode trigger for camera synchronization, and more. We refer to this device as the Florida Research Open-source Synchronization Tool (FROST). FROST allows for easy hardware and Arduino-based firmware modifications that enable a standard platform for the integration of novel peripheral sensors. RESULTS: With two examples, we demonstrate the application of this device during human research experiments: intracranial-electroencephalography (EEG) recordings in a patient with epilepsy and surface-EEG recordings in a healthy participant. We provide an example setup for a rodent experiment as well. We also demonstrate the timing delays of our device. COMPARISON WITH EXISTING METHODS: There is currently very few existing open-source synchronization tools for electrophysiological research that enable customization with new device compatibility. We developed this tool to enable widespread replication for many applications through an open-source platform. CONCLUSIONS: FROST can be easily adapted for research experiments beyond the included example cases. All materials are open-source at github.com/Brain-Mapping-Lab/FROST.
BACKGROUND: Accurate interpretation of electrophysiological data in cognitive and behavioral experiments requires the acquisition of time labels, such as marking the exact start of a condition or moment a stimulus is presented to a research subject. NEW METHOD: Here we present an inexpensive (∼30 USD) device used as a central relay for multiple peripheral devices, such as a computer screen presenting an experiment, a pressure-sensor push button, a multi-button responder, a pulse oximeter sensor, a light-emitting diode trigger for camera synchronization, and more. We refer to this device as the Florida Research Open-source Synchronization Tool (FROST). FROST allows for easy hardware and Arduino-based firmware modifications that enable a standard platform for the integration of novel peripheral sensors. RESULTS: With two examples, we demonstrate the application of this device during human research experiments: intracranial-electroencephalography (EEG) recordings in a patient with epilepsy and surface-EEG recordings in a healthy participant. We provide an example setup for a rodent experiment as well. We also demonstrate the timing delays of our device. COMPARISON WITH EXISTING METHODS: There is currently very few existing open-source synchronization tools for electrophysiological research that enable customization with new device compatibility. We developed this tool to enable widespread replication for many applications through an open-source platform. CONCLUSIONS: FROST can be easily adapted for research experiments beyond the included example cases. All materials are open-source at github.com/Brain-Mapping-Lab/FROST.
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