Magnetoencephalography (MEG) is a powerful technique for functional neuroimaging, offering a non-invasive window on brain electrophysiology. MEG systems have traditionally been based on cryogenic sensors which detect the small extracranial magnetic fields generated by synchronised current in neuronal assemblies, however, such systems have fundamental limitations. In recent years, non-cryogenic quantum-enabled sensors, called optically-pumped magnetometers (OPMs), in combination with novel techniques for accurate background magnetic field control, have promised to lift those restrictions offering an adaptable, motion-robust MEG system, with improved data quality, at reduced cost. However, OPM-MEG remains a nascent technology, and whilst viable systems exist, most employ small numbers of sensors sited above targeted brain regions. Here, building on previous work, we construct a wearable OPM-MEG system with 'whole-head' coverage based upon commercially available OPMs, and test its capabilities to measure alpha, beta and gamma oscillations. We design two methods for OPM mounting; a flexible (EEG-like) cap and rigid (additively-manufactured) helmet. Whilst both designs allow for high quality data to be collected, we argue that the rigid helmet offers a more robust option with significant advantages for reconstruction of field data into 3D images of changes in neuronal current. Using repeat measurements in two participants, we show signal detection for our device to be highly robust. Moreover, via application of source-space modelling, we show that, despite having 5 times fewer sensors, our system exhibits comparable performance to an established cryogenic MEG device. While significant challenges still remain, these developments provide further evidence that OPM-MEG is likely to facilitate a step change for functional neuroimaging.
Magnetoencephalography (MEG) is a powerful technique for functional neuroimaging, offering a non-invasive window on brain electrophysiology. MEG systems have traditionally been based on cryogenic sensors which detect the small extracranial magnetic fields generated by synchronised current in neuronal assemblies, however, such systems have fundamental limitations. In recent years, non-cryogenic quantum-enabled sensors, called optically-pumped magnetometers (OPMs), in combination with novel techniques for accurate background magnetic field control, have promised to lift those restrictions offering an adaptable, motion-robust MEG system, with improved data quality, at reduced cost. However, OPM-MEG remains a nascent technology, and whilst viable systems exist, most employ small numbers of sensors sited above targeted brain regions. Here, building on previous work, we construct a wearable OPM-MEG system with 'whole-head' coverage based upon commercially available OPMs, and test its capabilities to measure alpha, beta and gamma oscillations. We design two methods for OPM mounting; a flexible (EEG-like) cap and rigid (additively-manufactured) helmet. Whilst both designs allow for high quality data to be collected, we argue that the rigid helmet offers a more robust option with significant advantages for reconstruction of field data into 3D images of changes in neuronal current. Using repeat measurements in two participants, we show signal detection for our device to be highly robust. Moreover, via application of source-space modelling, we show that, despite having 5 times fewer sensors, our system exhibits comparable performance to an established cryogenic MEG device. While significant challenges still remain, these developments provide further evidence that OPM-MEG is likely to facilitate a step change for functional neuroimaging.
Magnetoencephalography (MEG) (Cohen,
1968) involves measurement of the small magnetic fields generated outside
the head by current flow in the brain. Post-measurement modelling of these fields
enables construction of 3-dimensional images showing moment-to-moment changes in
brain activity. Because MEG offers direct inference on brain electrophysiology, its
temporal precision is excellent. Further, in contrast to the potentials measured in
electroencephalography (EEG), magnetic fields are relatively unaffected by the
inhomogeneous conductivity profile of the head (Baillet, 2017; Boto et al.,
2019), meaning that spatial resolution is good (~5 mm) (Barratt et al., 2018). MEG therefore offers a powerful
means to characterise brain function in health and disease. It can be used to assess
the formation and dissolution of brain networks in real time as they modulate in
support of cognitive tasks (e.g. Baker et al.,
2014; O’Neill et al., 2017)
and this has led to its use in cutting edge neuroscience (e.g. Liu et al., 2019). In addition, MEG has potential for
clinical application; it is an established tool in epilepsy (e.g. (Stefan and Trinka, 2017)), it has potential for
diagnosing disorders like mild traumatic brain injury (Dunkley et al., 2015; Huang et al., 2014) and Autism Spectrum Disorder (Roberts et al., 2019b); and plays an important role in
understanding many other disorders, with examples including unipolar depression
(Nugent et al., 2015), psychosis (Robson et al., 2016) and dementia (López-Sanz et al., 2018).Despite this potential, there are a number of drawbacks to the current
generation of MEG technology. Detection of the femtotesla-scale magnetic fields
generated by the brain is typically made possible via the use of superconducting
quantum interference devices (SQUIDs) (Cohen,
1972). However, SQUIDs require cryogenic cooling and for this reason, MEG
sensors must be embedded in a cryogenic dewar. This brings about severe limitations:
first, the sensor array is fixed in location inside a
‘one-size-fits-all’ helmet. There is (at minimum) a 1.5–2 cm
gap between the sensors and the head because a thermally insulating vacuum must be
maintained between the participant’s head and the sensors. This gap is
inhomogeneous (with the largest brain-to-sensor distances typically in frontal areas
(Coquelet et al., 2020)) because the
array can’t adapt to different head shapes/sizes. The gap also increases
dramatically for individuals with small heads. Since the MEG signal follows an
inverse square law with distance (assuming a dipole model), this means poor signal
quality for specific brain regions (e.g. frontal lobes), or sometimes across the
whole brain (e.g. in babies or children). The second major limitation relates to
subject movement; any movement relative to the static sensor array will degrade data
quality. Even movements of order 5 mm can be problematic (Gross et al., 2013) and this makes the MEG environment
poorly tolerated by many individuals, particularly those with illness inducing
involuntary movements such as Tourette’s Syndrome or Parkinson’ s
Disease. Finally, the cryogenic infrastructure surrounding a MEG system makes both
purchase and running costs high, which limits uptake of MEG as an imaging
modality.In recent years there has been significant progress on the development of new
magnetic field sensors which have the potential to lift many of the limitations of
the current generation of MEG devices. Optically-pumped magnetometers (OPMs) exploit
the quantum mechanical properties of alkali atoms to measure small magnetic fields
(see Tierney et al., 2019a for a review).
OPMs have been shown to have sensitivities close to that of commercial SQUIDs (Allred et al., 2002; Dang et al., 2010; Kominis et al., 2003) and microfabrication techniques have enabled
miniaturisation (Griffith et al., 2010; Schwindt et al., 2007; Shah et al., 2007; Shah
and Romalis, 2009; Shah and Wakai,
2013) such that OPM packages are now compact. Their potential for
measurement of MEG signals has been established (Alem
et al., 2014; Johnson et al.,
2010, 2013; Kamada et al., 2015; Sander et al., 2012; Xia et al.,
2006), and readily available commercial OPMs now offer a means to develop
a new generation of MEG system (Boto et al.,
2017). Since OPMs do not require cryogenic cooling they can be placed
closer to the scalp than cryogenic sensors, enabling detection of larger signals as
well as field patterns with higher spatial frequencies (and consequently higher
spatial resolution) (Boto et al., 2016, 2019; Iivanainen et al., 2017, 2019b).
Flexibility of placement means an OPM array can, in principle, be adapted to any
head size (Hill et al., 2019). In addition,
when background fields are controlled (Holmes et
al., 2018, 2019) it is feasible to
collect data whilst a participant moves (Boto et
al., 2018; Hill et al., 2019). It
is therefore possible that the coming years could see a shift in MEG technology,
away from fixed cryogenic systems and towards wearable, adaptable, motion-robust
systems which provide high quality data. Such a shift would undoubtedly prove a step
change for MEG technology, offering access to new subject cohorts (e.g. infants) and
new experimental paradigms where head movement is not only allowed, but also
encouraged (e.g. Hill et al., 2019; Roberts et al., 2019a).Although there is exciting potential, OPM-MEG is a nascent technology with
significant development still required. Whilst multi-channel systems are available
(e.g. Borna et al., 2017; Boto et al., 2018; Iivanainen et al., 2019b), most demonstrations still employ small
numbers of sensors sited over specific brain regions and the introduction of a
whole-head array will be an important step forward. Sensor array coverage (i.e.
where to place OPMs to cover all possible cortical locations) and the number of OPMs
required to gain parity of performance with cryogenic systems remain open questions
(Iivanainen et al., 2019a; Tierney et al., 2019b) and there are, to date,
few studies comparing OPM and SQUID measurements (Borna, 2020; Boto et al., 2017;
Iivanainen et al., 2019c). Such
comparisons are critical if the MEG community is to gain confidence and adopt OPM
technology. Further, whilst the size and weight of OPMs are now appropriate for
scalp mounting, the design and fabrication methods for helmets are not established;
to date, wearable MEG demonstrations have tended to use 3D-printed helmets, some of
which are fabricated to fit individual participants (Barry et al., 2019; Boto et al.,
2017, 2018; Lin et al., 2019; Tierney
et al., 2018). However, such individualised “sensor-casts”
are expensive to build and the development of lightweight ergonomic helmets, able to
accommodate multiple individuals, would be an important step.In this paper, we introduce a ‘whole-head’ (49-channel)
wearable OPM-MEG system, constructed using commercially-available sensors (QuSpin
Inc.). We use this instrument to measure electrophysiological responses to a
visuo-motor paradigm. Employing a ‘test-re-test’ experimental design
in two participants (each scanned 18 times) we compare the reliability of
OPM-measured magnetic field data, and source-space (beamformer-reconstructed)
functional images, to an established state-of-the-art SQUID system. We also contrast
two different OPM helmet designs: a flexible (EEG style) cap, and an
additively-manufactured, generic, rigid sensor-cast. We introduce and evaluate new
optical techniques for co-registration of sensor location to brain anatomy for both
helmets, and we contrast the trade-offs between flexibility (which ensures OPMs are
close to the scalp) and rigidity (which enables accurate knowledge of sensor
locations for source reconstruction).
Materials and methods
All data were collected by the authors. All code for analysis was custom
written by the authors using MATLAB.
OPM-MEG system description
We built a whole-head multi-channel OPM-MEG system containing 49, 2nd
generation, zero-field magnetometers manufactured by QuSpin Inc. (Colorado,
USA). Each sensor is a self-contained unit, of dimensions 12.4 × 16.6
× 24.4 mm3, containing a Rb-87 gas vapour within a glass cell,
a laser for optical pumping, and on-board electromagnetic coils for controlling
the local magnetic field within the cell. Precisely how this device measures
magnetic field has been dealt with in previous papers and will not be repeated
here (for a review see Tierney et al.,
2019a). The OPMs were mounted on the participant’s head (see
below) and connected, via a 60-cm lightweight (3.3 g m −1)
flex cable, to a back-pack. Thicker cables are then taken from the backpack to
the control electronics. Analogue output signals were fed from the OPM
electronics to a National Instruments digital acquisition system (DAQ). Although
OPMs can measure two orthogonal components of the magnetic field, we only
measured the component of the magnetic field that was normal to the scalp
surface in the experiments reported here. Importantly, prior to the start of any
experiment, all OPMs were calibrated using a manufacturer established procedure.
In brief, on-board-sensor coils are energised to produce a known field within
the cell, the output of the sensor is then measured and calibrated to ensure a
response of 2.7 V nT−1. This procedure is extremely important
since post acquisition source modelling is highly dependent on accurately
calibrated sensors.The system is contained within a magnetically-shielded room (MSR)
designed and built specifically for OPM operation (MuRoom, Magnetic Shields
Limited, Kent, UK). This MSR, which comprises 2 mu-metal layers and a single
copper layer, is equipped with degaussing coils (Altarev et al., 2015), and this, coupled with its novel design,
means that the background static magnetic field can be reduced to ~1.5
nT, with field gradients of less than 2 nT m−1. For
comparison, a similar MSR in our institution with 2 layers of mu-metal and one
layer of aluminium, based on a design typically used to house cryogenic MEG
systems, has a background field of ~30 nT with gradients on the order of
10 nT m−1 (this room is not equipped with degaussing coils).
Control of background field for OPM measurements is extremely important:
on-board coils enable cancellation of background static magnetic fields inside
the OPM cell, and consequently operation in ‘high’ fields (up to
50 nT). However, operation is such that these coil currents are set at the
beginning of an experiment and left unchanged during the recording. This means
any movement of the OPM array (e.g. due to head movement) relative to the
background field will alter the fields within the OPMs. The operational dynamic
range of the QuSpin zero-field magnetometers (which we define here as the
maximum change in field before gain errors become >5%) is ~1.5 nT
(Boto et al., 2018). In an MSR with a
background field of 30 nT, this would mean a head rotation of around 3°
is enough to generate a 1.5 nT field change, which would, in turn, cause a
significant (>5%) change in gain of the OPM. In our novel MSR, an OPM can
be rotated through 360° and still maintain gain error within 5%.Even though OPMs remain operational in the low background field inside
our MSR, head movement within this field still generates artefactual signals
which can distort measured brain activity. For this reason, background field and
gradients were further controlled using a set of bi-planar coils placed either
side of the participant (Holmes et al.,
2018, 2019). These coils,
which are wound on two 1.6 m square planes separated by a 1.5 m gap in which the
participant is placed, generate 3 orthogonal magnetic fields and 4 of the 5
independent linear gradients[1]
within a (hypothetical) 40 cm cube inside which the participant’s head is
positioned. A reference array, placed behind the participant, then measures the
background field/gradient and currents are applied to the bi-planar coils to
cancel this remnant field. This takes the background field from 1.5 nT to
~0.5 nT, which enables a 3 fold improvement in suppression of movement
artefacts.A schematic diagram of the system is shown in Fig. 1A. The participant sat on a non-magnetic chair
placed in the centre of the MSR between the bi-planar coils (Fig. 1B). Three separate computers controlled the
OPMs, data acquisition, and the stimulus presentation. Note that all control
electronics are kept outside the MSR in order to minimise the effect of magnetic
interference on the MEG measurements.
Fig. 1.
The OPM-MEG system.
A) Schematic diagram of the whole system. B) Magnetically shielded room.
C) Flexible (EEG style) cap. D) Rigid additively manufactured helmet. Both
helmets contain push-fit clips to house the 2nd generation QuSpin OPMs (shown
inset in C) and D)).
Helmet design
Critical to the ultimate design of a viable OPM-based MEG system is the
way in which OPM sensors are mounted on the head. This design must represent a
balance of four critical considerations: first, sensors must be sited close to
the head, to pick up maximum signal, and rigidly held in position (i.e. no
movement relative to the head) to avoid artefact. Second, we need accurate
knowledge of the sensor locations and orientations relative to each other, and
relative to brain anatomy – this is imperative for data modelling. Third,
the helmet must be ergonomic and practical (for both participant and operator).
Finally, since the current commercially-available sensors require heating of the
Rb-87 vapour cell in order to operate in the spin exchange relaxation-free
(SERF) regime, the helmet design should allow heat to escape from the OPM and
its mounting. Here, we employed two contrasting solutions to this problem:
Flexible cap:
This is based on an ‘EEG-style’ cap, and contains 63
sensor mounts (see Fig. 1C). It is
manufactured by QuSpin. The cap is made from elasticated fabric, which is
given structure via incorporation of boning. The boning comprises a number
of rigid plastic wires which are sewn into the cap to help maintain its
shape, and to limit OPM movement relative to the scalp. Whist this gives
some structure, the cap remains easily stretched and so readily adapts to
any (adult) head shape (it would be easy to manufacture this cap in several
sizes to accommodate other age groups). The sensor mounts were 3D printed to
house QuSpin 2nd generation sensors, and made from plastic. They hold the
sensors at the corners without enclosing them and so heat is able to escape
from the external sensor surfaces through natural convection. The sensor
layout is based on the 10:10 EEG system. Flexibility of the cap ensures that
sensors are reasonably well positioned close to the scalp surface and so
measure high signal (with the caveat that, for individuals with long hair,
their hair can push the sensors off the scalp). The cap is also light-weight
and comfortable to wear for the participant, with a total weight of 309 g
(when containing 49 sensors). However, the flexibility also means that
neither the locations nor orientations of the sensors, both relative to one
another and relative to the brain anatomy, are known a-priori and this
information must be found using a co-registration procedure.
Rigid helmet:
In addition, we built an additively manufactured rigid helmet (Fig. 1D) from PA12 (which is a nylon
polymer) using an EOS P100 Formiga Laser Sintering machine. The size and
shape of the inner surface of the helmet is based on a set of adult MRIs;
the scalp surfaces were extracted from 9 MRI scans (co-registered together
beforehand) and these surfaces were superimposed, to produce a composite
head shape. This surface was grown radially by 1.5 mm to form a helmet inner
surface that will accommodate the majority of adults’ heads. Ear
pockets were incorporated into the design to improve its wearability and
comfort. Understandably, the resulting shape is a
“one-size-fits-all” solution due to the helmet’s
rigidity (i.e. it cannot adapt to head shape); for any single individual
there is naturally an inhomogeneous gap between the scalp surface and the
sensors. This gap was later found to range in size over the scalp surface
from 1.9 mm to 26.0 mm (median 7.2 mm) for a representative adult male.
Whilst any gap is non-ideal, this was significantly smaller than that for a
cryogenic MEG system (13.1 mm–38.8 mm for the same participant
(median 26.7 mm)). Again, in the future it would be possible to build this
helmet in multiple sizes to better accommodate variation across a normal
range of head sizes.The rigid helmet contains 133 cylindrical mounts, each of which can
hold an OPM sensor rigidly at its corners, so eliminating motion of any
sensor relative to all other sensors. Motion of the helmet relative to the
head is minimised by the use of internal padding and a chin strap. The
cylindrical design left space around each of the sensors which was opened up
to increase air circulation, enabling the natural convection of heat away
from the sensors and also from the participant’s head. The space
between the sensor mounts was filled with a matrix-based gyroid triply
periodic minimal surface lattice. This provides a lightweight and
mechanically-rigid structure, while also facilitating the natural convection
of heat away from the head, allowing the participant to feel more
comfortable by enabling the flow of air to the scalp. The helmet has a total
weight (including sensors) of 1.7 kg (whilst this is quite heavy, future
versions of this prototype could be made lighter – see 4. Discussion).A critical feature is that, although the sensors are not necessarily
positioned as close as possible to the scalp surface, the relative locations
and orientations of the sensor mounts are known to a high level of accuracy.
This is because a complete digital representation of the helmet exists, and
the tolerance of the 3D printing process is approximately 300 μm.
This means that the sensor casing can be located extremely accurately.
Further, the tolerances to which the OPMs are built is approximately 200
μm (QuSpin Inc.). This means that the location of the sensitive
region of the cell, and the orientation of the on board sensor coils (which
ostensibly determines orientation sensitivity of the sensor) is likely known
to within an accuracy of less than 1 mm and 1°. However, other
factors play a role in the effective characterisation of sensor
location/orientation; and these will be addressed in our discussion.
Co-registration
A 3-dimensional optical imaging system (structure IO camera (Occipital
Inc., San Francisco, CA, USA) coupled to an Apple iPad, operating with Skanect
software) and an anatomical MRI scan, were used for co-registration of OPM
sensor locations to brain anatomy (Homölle and Oostenveld, 2019; Zetter et al., 2019). The whole-head MRI scan was generated using a
3 T Philips Ingenia system, running an MPRAGE sequence, at an isotropic spatial
resolution of 1 mm. The co-registration procedure, for the two helmet types, was
as follows:Immediately following data acquisition, the OPMs were removed from
the sensor holders and coloured markers were added in their place (one per
sensor). The structure camera was used to acquire a 3-dimensional digitised
surface representing the participant’s scalp and face, along with the
markers. A colour-thresholding technique was then used to extract the
markers, and in this way the locations where the OPM casing met the cap
(hence scalp) were derived. OPM orientation was taken to be perpendicular to
the scalp surface, at the location of the sensor. A surface matching
algorithm fitted the scalp and face surface from the optical scan to the
equivalent surface extracted from the anatomical MRI scan, thus resulting in
complete co-registration of the surface sensor locations/orientations to
brain anatomy. The sensitive volume of the OPM (the cell) is located 6 mm
radially inwards from the outer casing, and is shifted 2 mm tangentially
(i.e. the OPM is asymmetric). We therefore approximated the location of the
cell as being 6 mm radially from the location of the surface marker.
Unfortunately, it was not possible to account for the asymmetry as the
rotational position of the sensor on the cap is unknown. This procedure is
summarised in Fig. 2A. Note that it was
not possible to add the coloured markers to the OPMs directly, as the
surface to be mapped by the structure camera then became too convoluted. It
is for this reason that removal of all OPMs prior to digitisation was
necessary. Unfortunately this adds significantly to overall set up time.
For the rigid helmet, the relative locations and orientations of the
sensor casings are known a-priori and this simplifies the procedure, such
that it is sufficient to generate a mapping between the helmet and the head
(rather than between each sensor and the head). Co-registration was done in
two stages. First, 6 coloured markers were placed at known locations on the
helmet, and a further 4 were placed on the participant’s face. The
camera and colour-thresholding were then used to map the relative locations
of these markers, allowing mapping of the helmet to the face. Following
this, the helmet was removed and the participant was asked to wear a
swimming cap (to flatten down their hair). A second digitisation was
acquired of the markers on the face, relative to the rest of the head
surface. The head surface was then fitted to the equivalent surface
extracted from the anatomical MRI scan. Combining two transforms
(helmet-to-head and head-to-MRI) we were able to effect a complete
co-registration of sensor casing to brain anatomy. In order to approximate
the location of the cell, the 6 mm radial offset was added, and because the
rotational position of the OPM was known, the 2 mm tangential offset was
also added (accounting for the asymmetry in the helmet). This procedure is
summarised in Fig. 2B.A key point here is that co-registration error manifests differently
in the two cases. For the rigid helmet, any error in co-registration affects
all sensors in a similar way – i.e. co-registration error is
‘systematic’- since the relative sensor locations are known
very accurately (from the 3D printing process). Conversely, for the flexible
cap, we require separate co-registration of each sensor location and
orientation. Co-registration error is therefore different for each sensor
and consequently manifests as a ‘random’ error. The
consequences of this to source localisation are highlighted by simulations
in Appendix 1.To estimate the accuracy of co-registration, we sequentially placed
the two helmets on a single participant, and ran each of our co-registration
procedures 10 times. Care was taken to ensure that the helmets did not move
between acquisitions. For every sensor, we measured its mean
location/orientation (across runs). We then measured the average Euclidean
distance from the mean location (across runs) as an estimate of random error
in location. Similarly, the average angular difference from the mean
orientation was taken as orientation error.
Experimental method
Two participants took part in the study (female and male, aged 29 and 24
respectively). Both were scanned 18 times; 6 times using OPM-MEG with the
flexible helmet (system 1), 6 times using OPM-MEG with the
rigid helmet (system 2), and 6 times using a cryogenic MEG
instrument (system 3). Both participants gave written informed
consent, and the study was approved by the University of Nottingham Medical
School Research Ethics Committee.
Paradigm design
We employed a visuo-motor paradigm which comprised presentation of a
visual stimulus which is known to robustly increase the amplitude of gamma
oscillations in primary visual cortex (Hoogenboom et al., 2006; Iivanainen et al., 2019c). A single trial comprised 1 s of
baseline measurement followed by visual stimulation in the form of a
centrally-presented, inwardly-moving, maximum-contrast circular grating
(total visual angle 5°; 1.8 cycles per degree). The grating was
displayed for a jittered duration of either 1.6 s, 1.7 s or 1.9 s. Each
trial ended with a 3 s baseline period, and a total of 100 trials was used.
During baseline periods, a fixation dot was shown on the centre of the
screen. The participant was instructed to perform abductions of their right
index finger for the duration that the stimulus was on the screen, in order
to ‘activate’ primary motor cortex (where we expected to see
beta-band modulation).
Data acquisition
We acquired data using our OPM-MEG systems with a sampling frequency
of 1200 Hz. In the first participant, 42 sensors were available; in the
second participant 49 sensors were available. In both cases, sensors were
spread uniformly around the head in order to achieve whole-head coverage
(see below) with an average spacing of 48 ± 4 mm covering an
approximate surface area of 840 cm2 for the rigid helmet, and an
average spacing of 36 ± 7 mm covering an approximate surface area of
482 cm2 for the flexible cap. Visual stimuli were presented via
back projection through a 21.5 cm diameter cylindrical waveguide in the MSR,
onto a screen placed ~85 cm in front of the participant. We used an
Optoma HD39Darbee projector with a refresh rate of 120 Hz. Temporal markers
delineating the onset and offset of visual stimulation were also recorded by
the DAQ. Co-registration was performed immediately after data collection.
Participants were free to move during the scan, but they were not actively
encouraged to do so, and movement was not tracked.Our cryogenic MEG recording used a 275 channel whole-head system
(CTF, Coquitlam, BC, Canada), operating in 3rd order gradiometer
configuration with a sampling rate of 600 Hz. Note that unlike our OPM
system which solely employed magnetometers, the 275 sensors in our cryogenic
system comprise 5-cm-baseline, axial gradiometers. These hard-wired
gradiometers, coupled with 3rd order synthetic gradiometry, act to reduce
background interference in the system, but at a cost of some depth
sensitivity in the brain (Vrba and Robinson,
2001). Importantly, the fact that we use magnetometers in our two
OPM systems and gradiometers in our cryogenic system makes it difficult to
compare sensor-space measurements; this is addressed further below. Again,
the stimulus was presented via back projection using a PROPixx (VPixx
Technologies) data projector, onto a screen placed 95 cm in front of the
participant. For the cryogenic system, co-registration was performed using
head localisation coils and digitisation. Specifically, prior to MEG
acquisition three head position indicator (HPI) coils were placed at the
nasion and pre-auricular points. These coils were energised continuously
throughout data collection to allow ongoing assessment of the head location.
Following each experiment, a 3D digitiser system (Polhemus, Colchester,
Vermont, USA) was used to record a 3D head shape for each participant, which
included the locations of the HPI coils. Surface matching of the digitised
head shape to a head shape extracted from the participants’ MR images
then allowed complete co-registration between brain anatomy and MEG sensor
geometry.
Estimating ‘whole head’ coverage
We aimed to estimate the likely coverage of the 3 different systems
across the brain. To do this, we divided the brain into regular 4-mm voxels.
For each voxel, we identified the orientation of the local tangential plane
(relative to the voxel location, which itself was defined relative to the
origin of a sphere that best fits the participant’s head shape). We
then simulated two dipoles along orthogonal orientations within that plane
(i.e. we assumed that radially orientated dipoles would be magnetically
‘silent’). We calculated the forward field for each dipole
using a single-sphere volume conductor model and a dipole approximation
(Sarvas, 1987). For both dipoles,
we determined the Frobenius norm of the forward-field patterns for each
orientation; we then averaged the two values, resulting in an approximation
of the total signal strength (across all sensors) from each voxel. This was
repeated for all voxels, resulting in a volumetric image showing how
estimated signal strength varies across the brain, for any sensor layout.
Images were formed based on 49 OPMs in the flexible and rigid helmets and
for the conventional cryogenic system. Sensor locations were based on
co-registration from a single experiment in Subject 2.
MEG data analysis
Analyses were equivalent for OPM-MEG (with both helmet types) and
cryogenic MEG.We first bandpass-filtered all data between 1 and 150 Hz, and removed
any ‘bad’ trials (specifically, trials in which the standard
deviation of the signal at any one sensor was greater than 3 times the average
standard deviation across all trials were removed). In order to visualise sensor
space results, data were then further filtered into the beta (13–30 Hz)
and gamma (55–70 Hz) bands (note we also performed a post hoc analysis of
the alpha band (8–13 Hz), with results given in Appendix 2). The Hilbert transform was taken and used
to construct the analytic signal; the square of the analytic signal was then
calculated to give the amplitude envelope (or “Hilbert envelope”)
of oscillations in each band, for each sensor. This was averaged across trials,
and baseline corrected (with baseline calculated over the −3.4 s <
t < −2.5 s time window, relative to stimulus offset at t = 0 s).
We then measured a sensor-space signal-to-noise ratio (SNR) for all channels:
for the gamma band this was calculated as the mean signal in the −2 s
< t < 0 s window, divided by the standard deviation of the signal
in the 0.5 s < t < 1.5 s window. For the beta band this was
calculated as the difference in mean signals in the −2 s < t
< 0 s and 0.5 s < t < 1.5 s windows (i.e. the difference
between the movement-related beta decrease and the post-movement beta rebound)
divided by the standard deviation in the −2 s < t < 0 s
window. These SNR metrics were plotted across sensors to visualise the
sensor-space topography of the beta and gamma responses. The mean envelope
signals for the sensors with the highest SNR were also plotted.Source localisation was performed using a scalar beamformer (Robinson and Vrba, 1999). The brain was
divided into 4-mm cubic voxels and a pseudo-t-statistical approach used to
contrast oscillatory power in an active window (−1.2 s < t
< 0.3 s) and a control window (0.6 s < t < 2.1 s); this was
then normalised by projected noise (Vrba and
Robinson, 2001). Images showing the spatial signature of modulation
in oscillatory power were generated for both the beta and gamma bands.
Beamformer weights were calculated independently for each band; specifically,
covariance matrices were generated using band-limited data and a time window
spanning the entire experiment. Covariance matrices were left un-regularised to
maximise spatial resolution (Brookes et al.,
2008). The source orientation for each voxel was obtained via a
search for the highest reconstructed ratio of projected power to noise, and the
forward solution was based on a single-sphere model. This algorithm was applied
to all 18 experiments in both participants, yielding 18 separate images showing
the spatial signature of oscillatory power change, for each band.Based on the pseudo-t-statistical images, a peak location was
determined, and a signal from this location was reconstructed. This was done in
two ways: first, using data covariance calculated in the broad (1–150 Hz)
band, beamformer weights were used to generate a broad-band ‘virtual
sensor’ time course. A time-frequency spectrum was then constructed by
sequentially frequency filtering the signal into overlapping bands, computing
the envelope of oscillatory power, averaging over trials and concatenating in
the frequency dimension. Second, using band-limited beamformer weights, the mean
envelope signals in just the beta and gamma bands were constructed.Based upon the derived source space images, source space time courses,
and sensor-space data, we computed four summary metrics to estimate the
effectiveness of each of our three MEG systems:Test-re-test source-localisation consistency: For
each experimental run, we calculated the location of the peak in the
pseudo-t-statistical image. These locations were averaged, and standard
deviation measured in three orthogonal orientations to define an
ellipsoid, spanning the spread of peak locations across runs. The
volumes of the ellipsoids were calculated as a summary statistic, with
larger values indicating lower consistency of reconstruction.Image consistency: For each experimental run, the
pseudo-t-statistical image was vectorised and Pearson correlation
computed between all pairs of runs (i.e. for six runs this results in 15
separate correlation values). These were then averaged and the standard
deviation was computed. Here, higher values would indicate greater
consistency between runs.Output SNR: This was calculated based on
trial-averaged, beamformer-reconstructed oscillatory envelopes. As for
the sensor-space analysis, SNR was defined for the gamma band as the
mean signal in the −2 s < t < 0 s window, divided
by standard deviation in the 0.5 s < t < 1.5 s window. For
the beta band we calculated the difference in mean signal between the
−2 s < t < 0 s and 0.5 s < t < 1.5 s
windows divided by the standard deviation in the −2 s < t
< 0 s window.Output-to-input SNR ratio: This is effectively a
measure of the ability of a beamformer to reconstruct a signal. The
measure is simply the SNR of the beamformer-reconstructed time course,
divided by the SNR at the best MEG sensor. Values above 1 indicate the
beamformer is improving data quality. Importantly, the beamformer not
only requires high-fidelity data, but also accurate knowledge of sensor
geometry (and consequently accurate co-registration). This simple
measure therefore captures the effectiveness of the overall system.
However, like input SNR, this is not comparable between cryogenic and
OPM systems because a cryogenic system is based on gradiometers not
magnetometers.In all cases, summary statistics were computed independently for each
frequency band and participant.
Results
Co-registration accuracy
Fig. 3 shows the accuracy of our
co-registration procedures for both OPM systems. Recall that sensor
locations/orientations were estimated independently 10 times, and averaged. We
then calculated the average Euclidean distance of each of the 10 independent
sensor locations from the mean, and likewise the average angular orientation
difference of each measurement from the mean. This was calculated for each
sensor separately [note that these values only provide an estimate of
random error; i.e. if there was a
systematic error affecting each run in the same way, it
would not be reflected here. However, such an estimate of systematic error would
be impossible without a ground truth sensor location/orientation]. In the
figure, the upper panels show the results from the rigid helmet and the lower
plots show those from the flexible cap; the left-hand plots show error in sensor
position whilst the right-hand plots show error in orientation. Quantitatively,
results show that for the rigid helmet, the average location and orientation
errors (across sensors) were 3.9 mm and 0.94° respectively. The maximum
errors at any one sensor were 5 mm and 1.1°, and these tended to occur
close to the back of the helmet. This is unsurprising since we used the front of
the helmet and the face for co-registration, and small errors at the front of
the head will cause rotational inaccuracies which will be amplified at the back
of the head. For the flexible cap, the average location and orientation errors
were 2.6 mm and 1° and the maximum errors were 3.6 mm/1°. Here,
again, the spatial topographies showed that the largest errors were towards the
back of the head. This is likely because the surface matching depends largely on
facial features.
Fig. 3.
Test-re-test co-registration errors:
A) Location error for rigid helmet. B) Orientation error for rigid
helmet. C) Location error for flexible helmet. D) Orientation error for flexible
cap. Colder colours indicate a more reliable co-registration at that sensor.
Importantly, the magnitudes of these errors are relatively small and
approximately in line with the co-registration errors typically reported for
cryogenic MEG (Adjamian et al., 2004;
Chella et al., 2019; Hillebrand and Barnes, 2011; Whalen et al., 2007). For the rigid helmet, these
error values reflects how accurately we know the location of the helmet relative
to the brain (since the sensor locations, relative to each other, are known
accurately from the additive manufacturing procedure). Conversely, for the
flexible cap, errors reflect how accurately we know sensor positions relative to
the brain, and relative to all other sensors. The reader is referred to Appendix 1 for a discussion of the
implications of this point.It is perhaps surprising that, overall, the uncertainty is larger for
the rigid helmet, however we believe that there are two reasons for this: first,
the coregistration for the rigid helmet is a two-step processes (see Fig. 2). This means that there are
potentially two sources of error. Second, the mapping is reliant on a relatively
small number of markers – 6 on the helmet and 4 on the face –
meaning that if just one of the markers is in the wrong place, the
coregistration procedure will have increased error. Also, these markers are
located at the front of the head which likely explains why error is minimised at
the front and larger at the back. In future, it is likely that the accuracy of
coregistration for both helmet deigns could be improved – for example by
the use of more markers on the face and more markers on the rigid helmet.
Sensor array coverage
Fig. 4 shows sensor positioning,
and coverage in the brain for the rigid helmet (left) the flexible cap (centre)
and a cryogenic system (right). In the upper plots, the pink dots show the
sensor locations relative to the head surface (though only one aspect is shown,
coverage is approximately symmetrical). In the lower plots, the colours
represent the norm of the expected magnetic field induced by a unit dipole (of
strength of 1 nA m) at all voxel locations in the brain. For all three systems
there is a degree of inhomogeneity across the brain with the temporal pole and
cerebellum suffering the lowest sensitivity. Nevertheless, we gain reasonable
sensitivity over the entire cortex, even with only 49 OPMs. Note the anisotropy
of the coverage in the cryogenic system with higher signal strengths in
posterior regions and lower signal strengths for the frontal lobes. This is not
the case with OPMs in the rigid helmet – indicating a more even coverage.
OPMs in the flexible cap also show poor coverage at the front of the head,
although this is due to the physical size of the cap and its positioning on the
head (to cover visual cortex). Finally note that, as a result of sensor
proximity, there is a difference in the scale of the expected fields. Both OPM
systems have a marked increase in signal compared to the cryogenic system since
no thermally insulating gap is required, and so sensors are positioned closer to
the scalp. It’s also noted that the flexible cap gets sensors closer to
the scalp than the rigid helmet, hence greater signal is observed.
Fig. 4.
Cortical coverage:
The plots on the top row show the sensor locations over the scalp. Lower
plots show the norm of the forward fields, for each dipole location in the
brain. Left, centre and right shows the rigid helmet, the flexible cap, and the
cryogenic system, respectively. Note, the magnitude of the colour axis is
different for each system.
MEG data – sensor-space comparison
Fig. 5 shows sensor-space beta- and
gamma-band signals. The topography plots show SNR with the six separate cases
representing the six repeat measurements. The line plots show the trial-averaged
oscillatory envelopes for the beta and gamma bands, extracted from the sensor
with the largest SNR (all six runs are overlaid). Importantly, these results
show very reliable repeat measurements for all 3 systems – the same
sensors show the largest signal change for each run, and the oscillatory
envelopes are highly repeatable. Specifically, in the beta band, in sensors over
the sensorimotor areas, we observe the characteristic movement-related beta
decrease (in the −2 s < t < 0 s window) and the post
movement beta rebound on movement cessation (in the 0 s < t < 2 s
window). In the gamma band we observe the well-known synchronisation during
visual stimulus presentation in sensors over occipital regions. These findings
were robust across both participants - see Fig.
A2 for results in Subject 2.
Fig. 5.
Sensor space results for Subject 1.
Upper, middle and lower panels show results from the rigid, flexible,
and cryogenic systems respectively. In all cases, the sensor space topography
plots show estimated SNRs of the beta and gamma signals for each sensor; the six
plots show six repeated measures in Subject 1. The line plots on the right-hand
side show the oscillatory envelopes of the beta and gamma effects extracted from
the sensor with the largest signal-to-noise ratio (all six runs are overlaid).
An equivalent Figure for Subject 2 is shown in Supplementary Material, Figure S1.
Fig. A2.
Summary of results in Alpha band.
A) Beamformer pseudo-T-statistical images averaged over all 6
experimental runs for both participants. B) Glass brain, with the centre
of the ellipsoids showing average peak location across runs. The size of
the ellipsoids represents the standard deviation of the peak locations
– and hence variability of localisation across runs. C) (Left)
Ellipsoid volumes averaged across participants, (middle) Image
consistency (correlation between pseudo-T-statistical images) collapsed
across both participants, (right) Signal-to-Noise ratios for the three
different systems in the alpha band. D) (Left) Input SNR at the best
sensor, (middle) Output SNR measured in beamformer projected data,
(right) Ratio of output to input SNR.
Quantitatively, the SNRs are higher for the flexible cap than for the
rigid helmet. This is to be expected as the flexible cap holds the sensors
closer to the head, on average, than the rigid helmet. The SNR values for the
OPMs and cryogenic sensors were comparable, however we note that such values
should not, strictly, be compared. This is because cryogenic data are derived
from 5-cm baseline axial gradiometers which are processed using third-order
synthetic gradiometry based on an independent SQUID reference array; OPM data
are completely unprocessed magnetometer data. Given that magnetometers exhibit
greater sensitivity to distal sources, it is likely that they show greater
contamination from environmental interference sources (including biomagnetic
fields from the body and brain regions of no interest). Such environmental
sources should be reduced significantly via gradiometry or reference array
subtraction. However, the fact that SNR values are comparable despite these
differences speaks to the excellent performance of the OPM sensors. This topic
will be addressed further in the Discussion.
Source-space comparison and summary statistics
Fig. 6 shows the results of source
localisation. Fig. 6A shows the spatial
signature of the change in beta and gamma oscillations for all three systems.
Results are for Subject 1, and the equivalent data for Subject 2 are shown in
Figure S2. The
pseudo-T-statistical images are averaged over all six experimental runs. As
expected, for both participants, beta change maps to contralateral primary
sensorimotor cortex and gamma modulation originates in primary visual cortex. In
Fig. 6B, the centre of each ellipsoid
represents the mean location of the peak in the relevant pseudo-T-statistical
images for beta or gamma modulation. The size of the ellipsoids represents the
standard deviation of the peak locations (measured independently in three
orthogonal axes). In this way, the ellipsoid volume is a means to estimate the
repeatability of source localisation, with lower values indicating a high
repeatability. Ellipsoids for the rigid helmet are shown in blue, the flexible
cap in yellow, and the cryogenic system in pink. Results for Subjects 1 and 2
are shown in the upper and lower panels, respectively. Note that the ellipsoids
fall close to one another and are well localised to primary sensorimotor and
visual regions. Fig. 6C displays the
ellipsoid volumes for both beta and gamma modulation. The bars in the bar chart
show averages (across both participants) whilst the red and blue squares show
the results for each of the two participants separately. Fig. 6D shows the image consistency metric (that is,
correlation of pseudo-T-statistical images for different pairs of experimental
runs, where high values represent high consistency across runs). Again, the bars
show average values, whilst the red and blue lines show the case for each
participant (the lines are centred on the mean for that participant and the line
length shows standard deviation).
Fig. 6.
Spatial signature of beta and gamma responses.
A) Beamformer pseudo-T-statistical images averaged over all 6
experimental runs for Subject 1. B) Glass brain, with the centre of the
ellipsoids showing average peak location across runs. The size of the ellipsoids
represents the standard deviation of the peak locations – and hence
random variability of localisation across runs. C) Ellipsoid volumes averaged
across participants. D) Image consistency (correlation between
pseudo-T-statistical images) collapsed across both participants.
Broadly, the repeatability of localisation for all systems is good.
Test-re-test localisation results are robustly localised within a small volume,
and in all cases correlation between images from separate but identical
experiments in the same individual are 75% or better (>90% in beta band).
It is noteworthy that these source-localisation metrics characterise both the
fidelity of the MEG data, and also the robustness of co-registration. In the
beta band we observe comparable performance for all three systems, whilst for
the gamma band, the cryogenic system remains somewhat more reliable. It is also
noteworthy that the performance of the rigid helmet appears to be marginally
better than the flexible helmet. Appendix A2 shows results for the
alpha-band.Fig. 7A shows beamformer-estimated
source time courses for the three different systems. The line plots show
oscillatory amplitudes in the beta and gamma bands (for all 6 runs overlaid),
whilst time-frequency spectrograms (which are averaged over runs) enable a
broadband picture of neural oscillatory modulation. The left-hand column shows
data extracted from the locations of peak beta modulation (i.e. motor cortex)
and the right-hand column shows data extracted from the locations of highest
gamma modulation (i.e. visual cortex). Fig.
7B shows estimates of the source-reconstructed SNR for the beta and
gamma bands. As before, the bars show the average across participants, whilst
the lines show the mean and standard deviation for each participant
individually. Note that high-fidelity data can be extracted for all three
systems, with comparable SNR. The SNR in the gamma frequency band is somewhat
higher for the cryogenic system compared with both OPM-based systems, however
this is largely a result of lower input (sensor-space) gamma SNR in Subject 2
(see Appendix 2 for alpha results).
A) Oscillatory envelopes and time frequency spectra extracted from the
locations of peak beta (left) and gamma (right) modulation. Top, centre and
bottom rows show rigid, flexible and cryogenic systems respectively. B)
Signal-to-Noise Ratios for the three different systems in the beta and gamma
bands.
Finally, Fig. 8A and B shows input
(sensor-space) and output (source-space) SNR for the two OPM systems,
respectively. In agreement with Fig. 3, the
sensor-space SNR is larger for the flexible cap than the rigid helmet and this
can be attributed to sensors being positioned closer to the scalp surface in the
flexible cap and consequently picking up more signal (see also Fig. 4). However, in source space, the SNR of the two
systems is comparable. Fig. 8C quantifies
this behaviour by showing the ratio of output to input SNR; values greater than
one indicate that application of beamforming is improving data quality by
accurate reconstruction, and rejection of signals of no interest that do not
originate from the probed brain location. In both systems, beamforming had a
positive impact on SNR for both beta- and gamma-band data. However, this impact
was more marked in the rigid helmet with e.g. SNR being approximately 2.5 times
greater in source space, compared to sensor space, for the gamma band (compared
to 1.5 for the flexible cap). This suggests that the beamformer is more
effective in the rigid helmet than the flexible cap – such behaviour is
in agreement with the results of simulations presented in Appendix 1.
Fig. 8.
Helmet design comparison:
A) Input SNR at the best sensor. B) Output SNR measured in beamformer
projected data. C) Ratio of output to input SNR.
Discussion
We have introduced a 49-channel whole-head wearable MEG system based on
commercial OPM sensors. This represents an important step forward compared to
previous OPM-MEG demonstrations which have involved smaller sensor counts targeting
specific brain regions. The OPMs are second-generation commercial devices –
each having a size 12.4 × 16.6 × 24.4 mm3, and a weight of
4 g. Previous incarnations of commercial OPMs have been too large, and their cables
too heavy, to realistically allow development of a wearable whole–head device
(cable weight is a particular problem due to torque on the head). However, these new
sensors, with their smaller size and lightweight (3.3 g m−1)
cabling, represent the ideal building blocks for a complete wearable MEG device. Our
current work shows that there are no fundamental barriers to combining large numbers
of these sensors (though technical considerations do exist, which are detailed
below). The present sensor count (49) remains small compared to cryogenic MEG
devices (which have ~300 sensors). Nevertheless, our array demonstrated
better relative coverage of the cortex than a conventional system (because the
scalp-to-sensor distance is more homogeneous around the head). Although some regions
(e.g. temporal pole) remain poorly represented, it is likely that, with a few extra
sensors, coverage could be further improved. Here we contrasted two generic helmets
(both built to fit many participants – such helmets are ideal for
neuroscientific studies where large cohorts are required). We have detailed novel
and accurate procedures to co-register sensor location and orientation to brain
anatomy, thus enabling source modelling for both helmets. Finally, we have
demonstrated that in terms of both sensor-space signal detection, and source-space
modelling, for alpha- (see Appendix 2), beta-
and gamma-band neural oscillations, a ~50-channel OPM system can offer
comparable performance to a current state-of-the-art, cryogenic MEG device.A primary aim of this paper was to compare two different designs of OPM
mounting – a flexible (EEG-style) cap versus a rigid
(additively-manufactured) helmet. Both designs are generic, fitting multiple
individuals, and both have technical advantages/disadvantages. The sensors are
held closer to the head in the flexible cap, and so pick up larger MEG signals
than in the rigid helmet, as a consequence of the inverse square relationship
between magnetic field and distance from the source. As expected therefore, our
results showed that sensor-space SNR (Fig.
8A) was higher for the flexible compared to the rigid helmet –
particularly for Subject 1 where, for example, gamma band SNR was more than
doubled in the flexible helmet [that said, in Subject 2 gamma SNR was not
significantly different between the flexible and rigid helmets, the likely
reason is that the shape of the flexible cap was distorted by the
participant’s hair, which pushed the sensors away from the scalp over the
occipital regions]. In contrast, the greatest (technical) advantage for the
rigid helmet is that sensor locations and orientations relative to each other
are known accurately. Consequently, any co-registration error affects all
sensors in a similar way (i.e. the whole helmet moves) and so this can be
thought of as a systematic error. With a flexible cap, co-registration errors
are random across sensors. Our simulations (see Appendix 1) show that beamforming is more robust to systematic
errors compared to random errors: in both cases one sees an error in the
reconstructed location of the source, but with systematic error the fidelity of
the reconstructed source time course is significantly improved. This is simply
due to a lead field model that better fits the data – if all sensors are
shifted in the same way, the measured field is more likely to look similar to a
modelled field, even though the modelled field might appear to originate in the
wrong location. If, however, sensor locations are randomly perturbed, the
spatial signature of the lead field will be disrupted, and hence will provide a
poor match to the measured fields making the beamformer less effective. This
finding from simulations is supported by experimental results: the
source-to-sensor-space SNR (Fig. 8C) is
consistently higher for the rigid helmet compared to the flexible helmet,
indicating that the beamformer was better able to reconstruct the source
accurately. So, whilst the sensor space SNR was greater for the flexible cap,
source-space modelling was better when the rigid helmet was used.This said, we also note that the difference between the flexible and
rigid mountings will change with beamformer ‘regularisation’.
Regularisation of the covariance matrix used for beamformer weights calculation
is well-known to make beamforming more tolerant to inaccuracies in the forward
model (Brookes et al., 2008). This is
shown in Appendix 1, where increasing
regularisation reduces the effect of coregistration error. Consequently, the
difference between a rigid and flexible helmet design, whilst still apparent,
becomes somewhat reduced with regularisation. We stress that the effect is still
present, and a rigid design retains its advantages even with regularisation.
Further, regularisation reduces spatial resolution and the ability of the
beamformer to cancel sources of no interest. Nevertheless, if a flexible cap is
desired, regularisation may be a useful means to improve results.There are also practical considerations relating to helmet design. The
flexible cap is lightweight (309 g) and adapts to any head size and so provides
a comfortable experience for the participant. The rigid helmet is heavier (1.7
kg), more cumbersome, and less adaptable. That said, one advantage of the rigid
helmet is that the OPMs are enclosed within a solid structure and therefore
protected; future iterations of the helmet could also be made to better manage
and protect cables. This all makes the system more robust, and is likely to be
extremely useful in subject groups (e.g. infants) who might try to interfere
with the sensors or cables during a scan. It is easy to see how our initial
prototype could be made lighter (1.7 kg remains too heavy for effective use),
and adaptability could be enabled either via the introduction of multiple helmet
sizes, or through the addition of a mechanism to allow sensor travel (in the
radial orientation) within the helmet (whilst maintaining accurate knowledge of
their location) similar to Zetter et al.
(2019). Another concern is usability. In the flexible cap, we found
that all sensors must be removed prior to co-registration. This is because with
sensors in place, optical co-registration was ineffective because of the
convoluted surface. Removal and replacement of all sensors between experiments
was found to take more than an hour. However, for the rigid helmet, sensors can
remain in place during co-registration making repeat measurements quicker.
Finally, a flexible helmet allows some motion of the OPM sensors relative to
each other during a scan (e.g. if a participant moves), whereas a rigid helmet
holds them fixed relative to each other. Any movement within a background field
generates artefacts. If sensors are rigidly held and helmet motion tracked,
those artefacts would be well characterised and, in principle, could be modelled
and removed. However, it would be much harder to track independent motion of all
sensor locations and orientations. This therefore offers another potential
advantage of a rigid helmet.In summary, findings indicate that whilst the flexible helmet is
comfortable to wear, aesthetically attractive compared to the rigid helmet, and
works reasonably well, we believe that the better source-space modelling, ease
of use, and system robustness make a rigid helmet a better option for OPM-MEG.
The advantage of the rigid helmet would be reinforced by the availability of
several helmet sizes or a facility for sensor travel to ensure close proximity
of the scalp and the sensor.
Comparison with the existing state-of-the-art
The potential advantages of OPMs over cryogenic MEG systems are well
known – adaptability to different head shapes/sizes, motion robustness,
no reliance on liquid helium, higher signal strength, higher spatial resolution
and lower cost. Not all of these potential advantages have yet been realised,
but our data show that an OPM-MEG system, with even a modest sensor count (49),
can compete with the current cryogenic MEG devices – at least for simple
paradigms inducing alpha, beta and gamma responses. Sensor locations are such
that the gap between the scalp and the sensors is more homogeneous across the
head (Fig. 4). This, in turn, means less
variation of sensitivity across the brain. In most adults this likely means
improved coverage of the frontal lobes (as in Fig.
4), but for people with smaller heads this means better global
coverage. Our sensor space data (Fig. 5)
show the expected increase in signal strength by moving OPMs closer to the scalp
compared to cryogenic flux transformers (beta band signals were, on average
~3 times larger; gamma band signals ~4 times larger, for Subject
1). However, SNR measures for the SQUID and OPM data are similar, and there are
several reasons for this. First, the inherent noise level in our OPMs is higher
than in the SQUID sensors, which means that whilst moving sensors to the scalp
surface affords a signal increase, this is (in part) negated by increased noise.
Our previous results from a single (static) OPM show an SNR increase of a factor
of two (Boto et al., 2017). However, this
assumes sensors touching the scalp and both head and sensor are immobile. Our
rigid helmet does not fit perfectly to all participants, and with our flexible
cap, participant’s hair distorts the cap shape. This means that the
expected increase in SNR compared to a cryogenic device will not necessarily be
achieved completely. Second, we have used a wearable device that allows the
participant to move freely. Although here the participant was not encouraged to
move, slight movement of the head will cause a degree of low amplitude
interference. Similarly, at the time of writing there is a known issue with
interference caused by relative motion of cables adding to interference (see
also below). Both issues can be readily solved by better field nulling (itself a
topic of ongoing work) and modifications to sensor electronics. However, the
present data were likely negatively impacted by these effects, lowering the
OPM-SNR. Finally, as noted above, when comparing sensor-space SNR, we are
comparing gradiometer data processed using synthetic gradiometry (cryogenic
system), to completely unprocessed magnetometer data (OPMs), with the latter
being more sensitive to interference. With these three considerations taken into
account, it is encouraging that OPMs show similar performance to the established
SQUID-based sensors.A much better comparison of OPM- and SQUID-based MEG can be achieved via
metrics of system performance in source space. Here, test-re-test source
localisation showed that pseudo-T-statistical images were extremely repeatable:
for all three systems, sources were localised as expected to primary
sensorimotor and visual cortices. There were some (small) differences between
locations across the three systems and (as with all neuroimaging experiments) a
limitation here is that we have no access to “ground truth” and
therefore it’s impossible to know which system provides the most accurate
localisation. Differences in localisation could be brought about by a number of
effects, including technical aspects such as coregistration or calibration
accuracy, and also changes in the paradigm set up (see below). Nevertheless,
these differences were small. Ellipsoid volumes, detailing the spread of peak
locations across experimental runs within a system were highly comparable for
both the rigid helmet OPM and cryogenic systems for the beta band. Likewise, our
image consistency metric showed better than 90% correlation across runs for all
3 systems. Gamma band results, in both participants, were a little more variable
for OPMs compared to the cryogenic system with, on average, larger ellipsoid
volumes and lower repeatability. There are likely two reasons for this: first a
lower sensor space SNR due to the proximity of the sensors to the head, and
second, limited sensor coverage (particularly in the flexible cap) over the
visual cortex. Nevertheless, gamma band signals were robustly localised to
primary visual cortex and functional images were >75% reproducible.Perhaps the best measure of MEG system fidelity is source space SNR.
This is not plagued by the magnetometer/gradiometer comparison problems that
affect sensor space SNR. Moreover, it combines information across channels and
requires effective magnetic field modelling, and hence high accuracy of
co-registration, as well as high quality input data with well calibrated
sensors. In this way it is a good marker of fidelity of the whole system, rather
than just of the OPM sensors. Here, again, we showed that source space SNR for
the OPM and cryogenic systems were comparable. In the beta band, OPMs showed
marginally (but not significantly) improved SNR; in the gamma band, the
cryogenic system had better SNR although this was mostly driven by Subject 2; in
fact across all experimental runs in Subject 1, gamma band SNR was similar for
all three systems. It is important to recognise that source localisation
optimally combines information across sensors in a weighted average; it is well
known that the more sensors that are available, the better source localisation
performs (Boto et al., 2016; Vrba et al., 2004). With this in mind,
perhaps the most surprising result of this study is that source localisation is
comparable between OPM and cryogenic systems, despite the fact that the
cryogenic system has more than 5 times more sensors. However, this appears to
support the theoretical findings by Tierney et
al., 2019b. It is tempting to speculate that whilst, here, we have
shown our OPM system to be “as good” as the current state of the
art, as OPM systems inevitably gain more sensors, it is likely that they will
significantly overtake cryogenic instruments.We should point out that one limitation of the study presented relates
to experimental conditions. We tried to match conditions as closely as possible
across systems, however there were some unavoidable differences: First the
viewing angle for visual stimulation was slightly different in the cryogenic MEG
set-up than for the OPM systems because the participant was seated in a
different posture. Second, finger abductions were performed with the hand
resting on a surface, but the surfaces were different, potentially resulting in
different sensory feedback. Third, for purely logistical reasons, it was not
possible to match the times at which the participants were scanned; this
introduces a caveat due to differences in responses depending on e.g. circadian
rhythm (Wilson et al., 2014) or menstrual cycle (Sumner et al., 2018). All of the above could add to variance in our
data and consequently systematic differences in the responses measured.
Future challenges
An important consideration relating to our results is the difference
between ‘physical’ and ‘effective’ sensor
location/orientation. Above, we have only described physical error – that
is, how accurately we know the location and orientation of the sensitive volume
of each OPM, relative to the brain. We have argued that this relates to the
accuracy by which the helmet is built and the accuracy of the coregistration
procedure used to localise the helmet on the head. However, other factors can
mean that the physical orientation of a sensor (i.e. the orientation along which
we expect to measure field) and the effective orientation (i.e. the real
sensitive axis) can differ. The most obvious reason for this would be cross talk
between sensors. During sensor operation, a modulation field – generated
by on-board electromagnetic coils within an OPM – is applied to the
rubidium vapour and it is the direction of this field that determines the
measurement orientation. Although this field is strongest inside the cell, it
spreads outside the OPM housing and as a result, will penetrate other nearby
OPMs. Superposition of the fields from other OPMs can therefore change the
orientation (and amplitude) of the modulation field within each OPM’s
cell, meaning that the effective measurement orientation of the sensor will
differ from its physical orientation. As a consequence, the forward field
calculated using the sensor’s physical orientation would likely provide
an inaccurate representation of real measurements. A similar effect occurs due
to gain errors. Our previous work (Boto et al.,
2018) has shown that OPM gain depends on background field. Sensors
are calibrated accurately at the beginning of any experiment and so we ensure a
known gain. However, if the background field shifts during a measurement, the
gain can change – a field shift of approximately 1.5 nT would result in a
5% gain reduction. Again, this means that the lead field would become
inaccurate. The beamformer (particularly with no regularisation) is extremely
sensitive to errors in forward model, and in turn is dependent on accurate
sensor orientation and gain calibration. Here, these problems were mitigated to
a degree; separation of the sensors was relatively large and so cross talk was
minimal. Further, field shifts were relatively low (<1.5 nT for all runs;
average of 0.67 nT ± 0.32 nT across all runs in both
participants[2]). However,
as sensor arrays become denser, or are operated in a less stable magnetic
environment, cross talk would require correction, and potentially we would need
to use dynamic field stabilisation to prevent the gain changing throughout the
experiment (Holmes et al., 2019).Combining large numbers of OPM sensors into a single MEG system brings
about other challenges. For example, current commercial OPMs operate in the spin
exchange relaxation free regime and use a Rb-87 atom vapour, meaning that sensor
cells must be heated. In the 2nd Generation QuSpin sensors the cell is
electrically heated using an AC current that oscillates at around 400 kHz.
Bringing cables into close proximity to one another, and specifically allowing
that proximity to change during a measurement, introduces variable cross-talk
between measurements (most likely an effect of capacitive coupling).
Additionally, if heater frequencies are set independently for each sensor, any
differences in those frequencies would mean it is possible to pick up
‘beat frequencies’. Finally, as noted above, small movements of
sensors within the remnant background field generate low amplitude interference.
In the present paper, we addressed some of these concerns – e.g. beating
between heater signals was negated by driving the heaters on all OPMs with
synchronised currents of the same frequency. However, most of these concerns
mainly affect lower frequencies (e.g. delta band). This is, unfortunately, also
where OPMs have an inherently lower performance (noise floor of ~20
fT/sqrt(Hz) compared to ~7 fT/sqrt(Hz) for >10 Hz for a SQUID).
This means that low frequency measurements are more challenging for an OPM-based
system. Nevertheless, improvements to electronics, better cable management,
better field nulling, and ultimately improved OPM sensors will undoubtedly meet
this challenge.Finally, here we have shown an approximately equivalent performance of a
49-channel OPM system and a 275-channel cryogenic system, however it is
important to also state that these were relatively simple paradigms with
relatively few sources (motor and visual cortex) ‘active’. It has
been shown previously that effective beamforming can be carried out using 50
sensors (Vrba and Robinson, 2002).
However, as the number of sources increase (e.g. for cognitive or resting state
paradigms) a greater number of sensors may be required. In addition, higher
sensor counts would mean a greater sensor density and consequently the array
would be able to capture higher spatial frequencies of field patterns on the
scalp. These higher frequencies are potentially important for OPM-based systems
which, because they are closer to the scalp, can sample higher spatial
frequencies than would typically be measured in SQUID-based MEG. Indeed, in a
recent study by Iivanainen et al.
(2019a), the authors used a theoretical framework to suggest that
on-scalp MEG recordings could significantly benefit from up to three times the
sensor count of conventional systems, if they are to capture the highest spatial
frequencies. It follows that moving to higher sensor density than our current
49-channel system would be highly beneficial.
Conclusion
In conclusion, we have shown that it is possible to construct a
‘whole head’ wearable MEG system based on commercial OPM sensors. We
have detailed two different designs for OPM mounting (a flexible cap and rigid
helmet) alongside simple and accurate co-registration techniques. Whilst both
designs work well, we argue that the rigid helmet is a more judicious choice.
Comparing our OPM system to a currently available cryogenic device, our array
demonstrated more even coverage, as would be expected. At the sensor level, repeated
measurements showed both OPM and cryogenic systems to be extremely reliable. In
source space, despite 5 times fewer sensors, our OPM-MEG system showed comparable
performance to the established state of the art in terms of source localisation
reliability and output (source space) signal to noise ratio, in the alpha (see Appendix 2), beta and gamma bands. OPMs remain
a nascent technology and significant technical challenges remain. Nevertheless,
there are no fundamental barriers to combining large numbers of sensors, and it is
likely OPM-MEG will overtake current systems in terms of performance in the coming
years.
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Authors: Amir Borna; Tony R Carter; Josh D Goldberg; Anthony P Colombo; Yuan-Yu Jau; Christopher Berry; Jim McKay; Julia Stephen; Michael Weisend; Peter D D Schwindt Journal: Phys Med Biol Date: 2017-11-10 Impact factor: 3.609
Authors: Chin-Hsuan Lin; Tim M Tierney; Niall Holmes; Elena Boto; James Leggett; Sven Bestmann; Richard Bowtell; Matthew J Brookes; Gareth R Barnes; R Chris Miall Journal: J Physiol Date: 2019-07-18 Impact factor: 5.182
Authors: Elena Boto; Richard Bowtell; Peter Krüger; T Mark Fromhold; Peter G Morris; Sofie S Meyer; Gareth R Barnes; Matthew J Brookes Journal: PLoS One Date: 2016-08-26 Impact factor: 3.240
Authors: Chad E Eichler; Leo K Cheng; Niranchan Paskaranandavadivel; Peng Du; Leonard A Bradshaw; Recep Avci Journal: Comput Biol Med Date: 2020-12-08 Impact factor: 4.589
Authors: Marc M Van Hulle; Richard Bowtell; Matthew J Brookes; Benjamin Wittevrongel; Niall Holmes; Elena Boto; Ryan Hill; Molly Rea; Arno Libert; Elvira Khachatryan Journal: BMC Biol Date: 2021-08-10 Impact factor: 7.431