| Literature DB >> 32474568 |
Shu Qiao Zhang1, Hai Bo Xu2, Shi Jun Zhang3, Xin Yu Li4.
Abstract
BACKGROUND Artemisia annua exerts powerful effects in non-small cell lung carcinoma (NSCLC). Some studies have shown that Artemisia annua possesses the characteristics of new therapeutic drugs for NSCLC patients. However, the underlying molecular mechanism of Artemisia annua anti-NSCLC is not yet fully elucidated because Artemisia annua contains hundreds of ingredients. This study aimed to conduct network pharmacological analysis on the mechanism of action of Artemisia annua against NSCLC. MATERIAL AND METHODS The active ingredients and corresponding potential targets of Artemisia annua were searched and screened in the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP). Then through The Cancer Genome Atlas (TCGA) and the National Center for Biotechnology Information (NCBI) databases to establish NSCLC related targets. Based on the matching results of Artemisia annua potential targets and NSCLC targets, a protein-protein interaction (PPI) network was constructed to analyze the interactions between these targets and topologically screen the central targets. Furthermore, Gene Ontology (GO) biological functions analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) signal pathways enrichment were carried out. RESULTS There were 19 main active ingredients of Artemisia annua screened for target prediction; 40 NSCLC-related common targets were identified via multiple NSCLC databases. The node area and corresponding degree value of AKT1, MYC, CCND1, VEGFA, JUN, MAPK1, EGFR, and ESR1 were large and could be easily found in the PPI network. The aforementioned results were further verified by the analysis of GO biological function and KEGG enrichment analysis. CONCLUSIONS The network pharmacology analysis reveals the molecular biological mechanism of Artemisia annua anti-NSCLC via multiple active components, multi-channels, and multi-targets. This suggests that Artemisia annua might be developed as a promising anti-NSCLC drug.Entities:
Mesh:
Substances:
Year: 2020 PMID: 32474568 PMCID: PMC7285955 DOI: 10.12659/MSM.923624
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Main active components of artemisia annua.
| TCMSP ID | PubChem CID | compound | Target number |
|---|---|---|---|
| MOL000006 | 5280445 | Luteolin | 57 |
| MOL000098 | 5280343 | Quercetin | 154 |
| MOL000354 | 5281654 | Isorhamnetin | 37 |
| MOL000359 | 12303645 | Sitosterol | 3 |
| MOL000422 | 5280863 | Kaempferol | 63 |
| MOL000449 | 5280794 | Stigmasterol | 31 |
| MOL002235 | 5317287 | EUPATIN | 16 |
| MOL004083 | 5281699 | Tamarixetin | 15 |
| MOL004112 | 5281678 | Patuletin | 11 |
| MOL004609 | 158311 | Areapillin | 17 |
| MOL005229 | 5320351 | Artemetin | 23 |
| MOL007274 | 188323 | Skrofulein | 11 |
| MOL007401 | 160237 | Cirsiliol | 10 |
| MOL007404 | N/A | Vitexin_qt | 15 |
| MOL007412 | 5281603 | DMQT | 10 |
| MOL007415 | 10026486 | [(2S)-2-[[(2S)-2-(benzoylamino)-3-phenylpropanoyl]amino]-3-phenylpropyl] acetate | 5 |
| MOL007423 | N/A | 6,8-di-c-glucosylapigenin_qt | 16 |
| MOL007424 | N/A | Artemisinin | 15 |
| MOL007426 | N/A | Deoxyartemisinin | 1 |
Figure 1Screening of potential anti-NSCLC targets of Artemisia annua. NSCLC – non-small cell lung cancer.
The potential anti-non-small cell lung cancer target of artemisia annua.
| UniprotID | Target protein | Name | Degree |
|---|---|---|---|
| P31749 | RAC-alpha serine/threonine-protein kinase | AKT1 | 36 |
| P01106 | Myc proto-oncogene protein | MYC | 35 |
| P15692 | Vascular endothelial growth factor A | VEGFA | 34 |
| P24385 | G1/S-specific cyclin-D1 | CCND1 | 34 |
| P05412 | Transcription factor AP-1 | JUN | 33 |
| P28482 | Mitogen-activated protein kinase 1 | MAPK1 | 32 |
| P00533 | Epidermal growth factor receptor | EGFR | 32 |
| P03372 | Estrogen receptor | ESR1 | 31 |
| Q07817 | Bcl-2-like protein 1 | BCL2L1 | 28 |
| P04626 | Receptor tyrosine-protein kinase erbB-2 | ERBB2 | 28 |
| Q16665 | Hypoxia-inducible factor 1-alpha | HIF1A | 27 |
| P38936 | Cyclin-dependent kinase inhibitor 1 | CDKN1A | 26 |
| Q07820 | Induced myeloid leukemia cell differentiation protein Mcl-1 | MCL1 | 26 |
| Q00987 | E3 ubiquitin-protein ligase Mdm2 | MDM2 | 26 |
| O15519 | Caspase-8 | CASP8 | 25 |
| P37231 | Peroxisome proliferator activated receptor gamma | PPARG | 22 |
| P42224 | Signal transducer and activator of transcription 1-alpha/beta | STAT1 | 22 |
| P09874 | Poly [ADP-ribose] polymerase 1 | PARP1 | 21 |
| P22301 | Interleukin-10 | IL10 | 20 |
| P06400 | Retinoblastoma-associated protein | RB1 | 19 |
| P35968 | Vascular endothelial growth factor receptor 2 | KDR | 18 |
| P49841 | Glycogen synthase kinase-3 beta | GSK3B | 17 |
| P04049 | RAF proto-oncogene serine/threonine-protein kinase | RAF1 | 17 |
| O14757 | Serine/threonine-protein kinase Chk1 | CHEK1 | 17 |
| P08581 | Hepatocyte growth factor receptor | MET | 17 |
| P25963 | NF-kappa-B inhibitor alpha | NFKBIA | 15 |
| O96017 | Serine/threonine-protein kinase Chk2 | CHEK2 | 15 |
| P01344 | Insulin-like growth factor II | IGF2 | 15 |
| P10415 | Apoptosis regulator Bcl-2 | BCL2 | 14 |
| Q13950 | Runt-related transcription factor 2 | RUNX2 | 14 |
| O14920 | Inhibitor of nuclear factor kappa-B kinase subunit beta | IKBKB | 13 |
| Q07812 | Apoptosis regulator | BAX | 13 |
| P21860 | Receptor tyrosine-protein kinase erbB-3 | ERBB3 | 13 |
| P11387 | DNA topoisomerase 1 | TOP1 | 13 |
| Q16236 | Nuclear factor erythroid 2-related factor 2 | NFE2L2 | 12 |
| Q9H3D4 | Cellular tumor antigen p53 | TP63 | 11 |
| P02452 | Collagen alpha-1 (I) chain | COL1A1 | 11 |
| P19793 | Retinoic acid receptor RXR-alpha | RXRA | 9 |
| Q15596 | Nuclear receptor coactivator 2 | NCOA2 | 7 |
| P06213 | Insulin receptor | INSR | 6 |
Figure 2PPI network of Artemisia annua potential target for NSCLC treatment. PPI – protein–protein interactions; NSCLC – non-small cell lung cancer.
Figure 3Network map of active ingredients and targets of Artemisia annua in the treatment of NSCLC. NSCLC – non-small cell lung cancer.
The biological process of artemisia annua on non-small cell lung cancer target.
| Description | Group genes | |
|---|---|---|
| 6.51E-06 | Regulation of oxidative stress-induced intrinsic apoptotic signaling pathway | AKT1, MCL1, NFE2L2, PARP1 |
| 8.93E-05 | Regulation of mitochondrial depolarization | BCL2, KDR, PARP1 |
| 1.85E-04 | Cellular response to vitamin | COL1A1, MDM2, PPARG |
| 1.85E-04 | Negative regulation of hydrogen peroxide-induced cell death | IL10, MET, NFE2L2 |
| 1.85E-04 | Regulation of anoikis | BCL2, CHEK2, MCL1 |
| 3.91E-04 | Cytoplasmic sequestering of NF-kappaB | IL10, NFKBIA |
| 4.02E-04 | Regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway | MCL1, PARP1 |
| 8.23E-04 | Monocyte differentiation | JUN, PPARG |
| 1.27E-03 | Ositive regulation of glycogen biosynthetic process | AKT1, INSR |
| 1.57E-03 | DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator | CDKN1A, CHEK2 |
Figure 4GO biological process analysis. Go – Gene Ontology.
Enrichment analysis of KEGG signal pathway of artemisia annua anti-small cell lung cancer targets (top 20).
| KEGG ID | Pathway | Group genes | |
|---|---|---|---|
| KEGG: 04151 | PI3K-Akt signaling pathway | 3.28E-17 | AKT1, BCL2, BCL2L1, CCND1, CDKN1A, COL1A1, EGFR, ERBB2, ERBB3, GSK3B, IGF2, IKBKB, INSR, KDR, MAPK1, MCL1, MDM2, MET, MYC, RAF1, RXRA |
| KEGG: 04210 | Apoptosis | 4.69E-11 | AKT1, BAX, BCL2, BCL2L1, CASP8, IKBKB, JUN, MAPK1, MCL1, NFKBIA, PARP1, RAF1 |
| KEGG: 04012 | ErbB signaling pathway | 2.45E-10 | AKT1, CDKN1A, EGFR, ERBB2, ERBB3, GSK3B, JUN, MAPK1, MYC, RAF1 |
| KEGG: 04115 | p53 signaling pathway | 1.76E-09 | BAX, BCL2, BCL2L1, CASP8, CCND1, CDKN1A, CHEK1, CHEK2, MDM2 |
| KEGG: 04625 | C-type lectin receptor signaling pathway | 1.79E-09 | AKT1, CASP8, IKBKB, IL10, JUN, MAPK1, MDM2, NFKBIA, RAF1, STAT1 |
| KEGG: 04510 | Focal adhesion | 3.56E-09 | AKT1, BCL2, CCND1, COL1A1, EGFR, ERBB2, GSK3B, JUN, KDR, MAPK1, MET, RAF1 |
| KEGG: 04630 | JAK-STAT signaling pathway | 6.86E-09 | AKT1, BCL2, BCL2L1, CCND1, CDKN1A, EGFR, IL10, MCL1, MYC, RAF1, STAT1 |
| KEGG: 04068 | FoxO signaling pathway | 1.72E-08 | AKT1, CCND1, CDKN1A, EGFR, IKBKB, IL10, INSR, MAPK1, MDM2, RAF1 |
| KEGG: 04218 | Cellular senescence | 1.05E-07 | AKT1, CCND1, CDKN1A, CHEK1, CHEK2, MAPK1, MDM2, MYC, RAF1, RB1 |
| KEGG: 04066 | HIF-1 signaling pathway | 6.47E-07 | AKT1, BCL2, CDKN1A, EGFR, ERBB2, HIF1A, INSR, MAPK1 |
| KEGG: 04110 | Cell cycle | 2.95E-06 | CCND1, CDKN1A, CHEK1, CHEK2, GSK3B, MDM2, MYC, RB1 |
| KEGG: 04620 | Toll-like receptor signaling pathway | 1.28E-05 | AKT1, CASP8, IKBKB, JUN, MAPK1, NFKBIA, STAT1 |
| KEGG: 04380 | Osteoclast differentiation | 4.29E-05 | AKT1, IKBKB, JUN, MAPK1, NFKBIA, PPARG, STAT1 |
| KEGG: 04657 | IL-17 signaling pathway | 8.36E-05 | CASP8, GSK3B, IKBKB, JUN, MAPK1, NFKBIA |
| KEGG: 04215 | Apoptosis | 2.21E-04 | BAX, BCL2, BCL2L1, CASP8 |
| KEGG: 04520 | Adherens junction | 2.65E-04 | EGFR, ERBB2, INSR, MAPK1, MET |
| KEGG: 04658 | Th1 and Th2 cell differentiation | 7.11E-04 | IKBKB, JUN, MAPK1, NFKBIA, STAT1 |
| KEGG: 04064 | NF-kappa B signaling pathway | 7.37E-04 | BCL2, BCL2L1, IKBKB, NFKBIA, PARP1 |
| KEGG: 04370 | VEGF signaling pathway | 1.31E-03 | AKT1, KDR, MAPK1, RAF1 |
| KEGG: 04340 | Hedgehog signaling pathway | 6.15E-03 | BCL2, CCND1, GSK3B |
Figure 5Enrichment analysis of KEGG signaling pathway. KEGG – Kyoto Encyclopedia of Genes and Genomes.