| Literature DB >> 32468592 |
Bianca N Lourenço1, Amanda E Coleman1, Jaime L Tarigo2, Roy D Berghaus3, Cathy A Brown2, Daniel R Rissi2, James B Stanton2, Scott A Brown4, Chad W Schmiedt1.
Abstract
BACKGROUND: Increased gene transcription of hypoxia-induced mediators of fibrosis in renal tissue has been identified in experimentally induced, ischemic chronic kidney disease (CKD).Entities:
Keywords: feline; hypoxia-inducible factor; matrix metalloproteinases; tissue inhibitor of metalloproteinase; transforming growth factor; tubulointerstitial fibrosis; vascular endothelial growth factor
Mesh:
Substances:
Year: 2020 PMID: 32468592 PMCID: PMC7379026 DOI: 10.1111/jvim.15801
Source DB: PubMed Journal: J Vet Intern Med ISSN: 0891-6640 Impact factor: 3.333
Primer sequences for quantitative polymerase chain reaction
| Gene | Ensemble ID/ NCBI access no. | Primer sequence (5′ → 3′) | Fragment size (bp) | Source |
|---|---|---|---|---|
|
| ENSFCAG 00000006874 |
For: GCTGCCCAGAACATCATCC rev: GTCAGATCCACGACGGACAC | 134 | Riedel et al |
|
| NM_001009832 |
For: GTCCCAGAAGCCGCACTT T rev: CACAATCTCGCTCGGGAA AA | 74 | Kessler et al |
|
| XM_001493206 |
For: TTGGCAGCAATGACACAGACACTG rev: TTGAGTGCAGGGTCAGCACTACTT | 175 | Agaoglu et al |
|
| XM_003998042.2 |
For: AGACAAGTTCTGGAGGTACAATG rev: CGCCCTTGAAGAAGTAGCTGT | 149 | Lourenço et al |
|
| XM_003992303.2 |
For: CTTTGCAAGAGGAGCTCACG rev: AATTCCTAGACCCCTGCCGT | 148 | Lourenço et al |
|
| XM_003983412.4 |
For: GCTTCTGGAGGTTCGACGTG rev: CAATAGAAGCGGTCCTGGCA | 148 | Lourenço et al |
|
| AY425617.1 |
For: AGCACGTGGAGCTGTACCAGAAAT rev: TCCAGTGACATCAAAGGACAGCCA | 110 | Agaoglu et al |
|
| XM_011291721.2 |
For: TCTCATCGCCGGAAAACTGC rev: AGCCAGCAGCATAGGTCTTG | 122 | Lourenço et al |
|
| AB071947.1 |
For: TTTCTGCTCTCTTGGGTGCATTGG rev: TGCGCTGGTAGACATCCATGAACT | 139 | Agaoglu et al |
Abbreviations: For: forward primer; GAPDH, gene for glyceraldehyde 3‐phosphate dehydrogenase; HIF1A, gene for hypoxia‐inducible factor‐1α; MMP2, gene for matrix metalloproteinase‐2; MMP7, gene for matrix metalloproteinase‐7; MMP9, gene for matrix metalloproteinase‐9; NCBI, National Center for Biotechnology Information; rev: reverse primer; RPS7, gene for ribosomal protein S7; TGFB1, gene for transforming growth factor‐β1; TIMP1, gene for tissue inhibitor of metalloproteinase‐1; VEGFA, gene for vascular endothelial growth factor‐A.
Clinical and clinicopathologic data from cats with chronic kidney disease (n = 12) and from healthy control cats (n = 8). Numerical data are presented as mean ± SD or median (range), where appropriate. Number of cats for which data are available is provided if different from the number of individuals in each group
| Chronic kidney disease group | Healthy control group |
| |
|---|---|---|---|
| Number included | 12 | 8 | |
| Age (years) | 17.4 (3.1‐19.4) | 1.7 (1‐7) | <.001 |
| Sex | .005 | ||
| Female spayed | 7 | 0 | |
| Female intact | 0 | 3 | |
| Male neutered | 5 | 4 | |
| Male intact | 0 | 1 | |
| Breed | .24 | ||
| Domestic short haired | 8 | 8 | |
| Domestic medium haired | 3 | 0 | |
| Abyssinian | 1 | 0 | |
| Body weight (kg) | 3.77 ± 1.42 | 4.22 ± 0.95 | .44 |
| n | 10 | 8 | |
| Serum creatinine concentration (mg/dL) | 5.7 ± 3.2 | 0.9 ± 0.5 | <.001 |
| Serum urea nitrogen concentration (mg/dL) | 92.0 ± 41.9 | 24.9 ± 5.1 | <.001 |
| Serum symmetric dimethylarginine (μg/dL) | 14.5 (9‐20) | 10.5 (6‐14) | .60 |
| n | 2 | 8 | |
| Urine specific gravity | 1.016 ± 0.003 | 1.051 ± 0.007 | <.001 |
| n | 8 | 8 | |
| Urinary protein‐to‐creatinine ratio | 0.70 (0.39‐23.41) | 0.19 (0.07‐0.41) | .02 |
| n | 3 | 8 | |
| Days elapsed between last clinicopathologic data and euthanasia | 11.5 (0‐525) | 0 (0‐0) | .01 |
| IRIS CKD stage | N/A | ||
| 1 | 1 | ||
| 2 | 2 | ||
| 3 | 2 | ||
| 4 | 7 |
Abbreviations: CKD, chronic kidney disease; IRIS, International Renal Interest Society.
IRIS CKD stage assumes that the most recent serum creatinine concentration measurement represented the cat’s stable value.
FIGURE 1Dot plots of normalized gene transcript levels of HIF1A (A), MMP2 (B), MMP7 (C), MMP9 (D), TIMP1 (E), TGFB1 (F), and VEGFA (G) in renal tissue homogenates from each kidney of cats with chronic kidney disease (n = 12) and healthy control cats (n = 8). Levels of each target gene were normalized to those of the reference genes GAPDH and RPS7. For each gene, transcript levels are scaled to those of the lowest sample; note, therefore, that scales differ among genes. Values from the left (open diamond) and right kidney (open circle) of the same individual are connected by solid lines. **P < .01; ***P < .001. CKD, chronic kidney disease; HIF1A, gene for hypoxia‐inducible factor‐1α; MMP2, gene for matrix metalloproteinase‐2; MMP7, gene for matrix metalloproteinase‐7; MMP9, gene for matrix metalloproteinase‐9; TGFB1, gene for transforming growth factor‐β1; TIMP1, gene for tissue inhibitor of metalloproteinase‐1; VEGFA, gene for vascular endothelial growth factor‐A
Association between serum creatinine concentration (mg/dL) and natural log‐transformed bilateral renal tissue homogenate gene transcript levels in healthy control cats (n = 8) and cats with chronic kidney disease (n = 11) using a linear mixed model
| Gene | Group | Slope (SE) |
|
|---|---|---|---|
|
| Control | −0.21 (0.15) | .21 |
| CKD | −0.01 (0.05) | .86 | |
|
| Control | 0.49 (0.40) | .25 |
| CKD | 0.12 (0.06) | .06 | |
|
| Control | 0.53 (0.32) | .14 |
| CKD | 0.14 (0.06) | .05 | |
|
| Control | 1.14 (0.85) | .20 |
| CKD | 0.15 (0.11) | .20 | |
|
| Control | 0.19 (0.11) | .12 |
| CKD | −0.02 (0.04) | .65 | |
|
| Control | 0.04 (0.17) | .81 |
| CKD | 0.13 (0.04) | .005 | |
|
| Control | −0.01 (0.14) | .95 |
| CKD | −0.04 (0.02) | .07 |
Notes. Linear mixed model with fixed effect = group, creatinine, group*creatinine; random effect = cat. Slopes represent the change in ln(transcript levels) corresponding to a 1 mg/dL increase in serum creatinine. One cat in the chronic kidney disease group did not have a serum creatinine measurement within 91 days of euthanasia and was not included in the analysis.
Abbreviations: HIF1A, gene for hypoxia‐inducible factor‐1α; MMP2, gene for matrix metalloproteinase‐2; MMP7, gene for matrix metalloproteinase‐7; MMP9, gene for matrix metalloproteinase‐9; RPS7, gene for ribosomal protein S7; TGFB1, gene for transforming growth factor‐β1; TIMP1, gene for tissue inhibitor of metalloproteinase‐1; VEGFA, gene for vascular endothelial growth factor‐A.
FIGURE 2Dot plot of median inflammation (A), tubular atrophy (B), and fibrosis (C) scores of kidneys from cats with chronic kidney disease (n = 12) and from healthy adult control cats (n = 8). Values from the left (open diamond) and right kidney (open circle) of the same individual are connected by solid lines. Histologic scores were recorded as integer values; spherical random noise has been added to the observations in this figure to facilitate visualization of kidneys with overlapping scores
Association between renal histologic lesion scores for inflammation, tubular atrophy, and fibrosis, and natural log‐transformed gene transcript levels in bilateral renal tissue samples from cats with chronic kidney disease (n = 12) using a linear mixed model
| Histologic score | Gene | Coefficient (SE) |
|
|---|---|---|---|
| Inflammation |
| 0.49 (0.24) | .05 |
|
| 0.15 (0.28) | .61 | |
|
| 0.42 (0.36) | .25 | |
|
| −0.51 (0.39) | .21 | |
|
| 0.34 (0.18) | .06 | |
|
| 0.18 (0.26) | .51 | |
|
| −0.09 (0.11) | .44 | |
| Tubular atrophy |
| 0.08 (0.16) | .62 |
|
| 0.31 (0.15) | .05 | |
|
| 0.64 (0.19) | .003 | |
|
| 0.22 (0.23) | .34 | |
|
| 0.16 (0.12) | .18 | |
|
| 0.22 (0.15) | .16 | |
|
| 0.04 (0.07) | .58 | |
| Fibrosis |
| 0.06 (0.18) | .75 |
|
| 0.67 (0.19) | .002 | |
|
| 0.71 (0.27) | .02 | |
|
| 0.66 (0.33) | .06 | |
|
| 0.08 (0.14) | .57 | |
|
| 0.49 (0.19) | .02 | |
|
| −0.43 (0.12) | .003 |
Note. Linear mixed model with fixed effect = histologic score; random effect = cat.
Abbreviations: HIF1A, gene for hypoxia‐inducible factor‐1α; MMP2, gene for matrix metalloproteinase‐2; MMP7, gene for matrix metalloproteinase‐7; MMP9, gene for matrix metalloproteinase‐9; RPS7, gene for ribosomal protein S7; TGFB1, gene for transforming growth factor‐β1; TIMP1, gene for tissue inhibitor of metalloproteinase‐1; VEGFA, gene for vascular endothelial growth factor‐A.
The coefficient for the VEGFA fibrosis model represents the change in ln(VEGFA transcript levels) for kidneys with a fibrosis score of 2 (moderate) or 3 (severe) compared to kidneys with a fibrosis score of 1 (mild). The coefficients for all other models represent the change in ln(transcript levels) corresponding to a one‐unit increase in the linear histologic score.
FIGURE 3Scatter plot of natural log of normalized gene transcript levels of MMP7 and tubular atrophy scores (A), MMP2 and fibrosis scores (B), MMP7 and fibrosis scores (C), TIMP1 and fibrosis scores (D), and VEGFA and fibrosis scores (E) in tissue samples from each kidney of cats with chronic kidney disease (n = 12)