Literature DB >> 32466640

Machine Learning for Precision Breast Cancer Diagnosis and Prediction of the Nanoparticle Cellular Internalization.

Maha Alafeef1,2, Indrajit Srivastava1, Dipanjan Pan1,3,4.   

Abstract

In the field of theranostics, diagnostic nanoparticles are designed to collect highly patient-selective disease profiles, which is then leveraged by a set of nanotherapeutics to improve the therapeutic results. Despite their early promise, high interpatient and intratumoral heterogeneities make any rational design and analysis of these theranostics platforms extremely problematic. Recent advances in deep-learning-based tools may help bridge this gap, using pattern recognition algorithms for better diagnostic precision and therapeutic outcome. Triple-negative breast cancer (TNBC) is a conundrum because of the complex molecular diversity, making its diagnosis and therapy challenging. To address these challenges, we propose a method to predict the cellular internalization of nanoparticles (NPs) against different cancer stages using artificial intelligence. Here, we demonstrate for the first time that a combination of machine-learning (ML) algorithm and characteristic cellular uptake responses for individual cancer cell types can be successfully used to classify various cancer cell types. Utilizing this approach, we can optimize the nanomaterials to get an optimum structure-internalization response for a given particle. This methodology predicted the structure-internalization response of the evaluated nanoparticles with remarkable accuracy (Q2 = 0.9). We anticipate that it can reduce the effort by minimizing the number of nanoparticles that need to be tested and could be utilized as a screening tool for designing nanotherapeutics. Following this, we have proposed a diagnostic nanomaterial-based platform used to assemble a patient-specific cancer profile with the assistance of machine learning (ML). The platform is composed of eight carbon nanoparticles (CNPs) with multifarious surface chemistries that can differentiate healthy breast cells from cancerous cells and then subclassify TNBC cells vs non-TNBC cells, within the TNBC group. The artificial neural network (ANN) algorithm has been successfully used in identifying the type of cancer cells from 36 unknown cancer samples with an overall accuracy of >98%, providing potential applications in cancer diagnostics.

Entities:  

Keywords:  artificial neural network, biosensor; breast cancer; cancer diagnosis; carbon nanoparticles; cellular uptake; pattern recognition

Mesh:

Year:  2020        PMID: 32466640     DOI: 10.1021/acssensors.0c00329

Source DB:  PubMed          Journal:  ACS Sens        ISSN: 2379-3694            Impact factor:   7.711


  7 in total

Review 1.  Merging data curation and machine learning to improve nanomedicines.

Authors:  Chen Chen; Zvi Yaari; Elana Apfelbaum; Piotr Grodzinski; Yosi Shamay; Daniel A Heller
Journal:  Adv Drug Deliv Rev       Date:  2022-02-18       Impact factor: 17.873

2.  Algorithmically Guided Optical Nanosensor Selector (AGONS): Guiding Data Acquisition, Processing, and Discrimination for Biological Sampling.

Authors:  Christopher W Smith; Mustafa Salih Hizir; Nidhi Nandu; Mehmet V Yigit
Journal:  Anal Chem       Date:  2021-12-29       Impact factor: 8.008

3.  Monitoring the Viral Transmission of SARS-CoV-2 in Still Waterbodies Using a Lanthanide-Doped Carbon Nanoparticle-Based Sensor Array.

Authors:  Maha Alafeef; Ketan Dighe; Parikshit Moitra; Dipanjan Pan
Journal:  ACS Sustain Chem Eng       Date:  2021-12-29       Impact factor: 8.198

4.  A Fluorescent Biosensor for Sensitive Detection of Salmonella Typhimurium Using Low-Gradient Magnetic Field and Deep Learning via Faster Region-Based Convolutional Neural Network.

Authors:  Qiwei Hu; Siyuan Wang; Hong Duan; Yuanjie Liu
Journal:  Biosensors (Basel)       Date:  2021-11-11

Review 5.  Nanomedicine Ex Machina: Between Model-Informed Development and Artificial Intelligence.

Authors:  Mônica Villa Nova; Tzu Ping Lin; Saeed Shanehsazzadeh; Kinjal Jain; Samuel Cheng Yong Ng; Richard Wacker; Karim Chichakly; Matthias G Wacker
Journal:  Front Digit Health       Date:  2022-02-18

Review 6.  Diagnostic Approaches For COVID-19: Lessons Learned and the Path Forward.

Authors:  Maha Alafeef; Dipanjan Pan
Journal:  ACS Nano       Date:  2022-08-03       Impact factor: 18.027

7.  Machine learning diagnosis by immunoglobulin N-glycan signatures for precision diagnosis of urological diseases.

Authors:  Hiromichi Iwamura; Kei Mizuno; Shusuke Akamatsu; Shingo Hatakeyama; Yuki Tobisawa; Shintaro Narita; Takuma Narita; Shinichi Yamashita; Sadafumi Kawamura; Toshihiko Sakurai; Naoki Fujita; Hirotake Kodama; Daisuke Noro; Ikuko Kakizaki; Shigeyuki Nakaji; Ken Itoh; Norihiko Tsuchiya; Akihiro Ito; Tomonori Habuchi; Chikara Ohyama; Tohru Yoneyama
Journal:  Cancer Sci       Date:  2022-05-25       Impact factor: 6.518

  7 in total

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