Literature DB >> 32457822

Diffuse Correlation Spectroscopy Analysis Implemented on a Field Programmable Gate Array.

Wei Lin1, David R Busch2, Chia Chieh Goh1, James Barsi1, Thomas F Floyd1,2.   

Abstract

Diffusive correlation spectroscopy (DCS) is an emerging optical technique that measures blood perfusion in deep tissue. In a DCS measurement, temporal changes in the interference pattern of light, which has passed through tissue, are quantified by an autocorrelation function. This autocorrelation function is further parameterized through a non-linear curve fit to a solution to the diffusion equation for coherence transport. The computational load for this non-linear curve fitting is a barrier for deployment of DCS for clinical use, where real-time results, as well as instrument size and simplicity, are important considerations. We have mitigated this computational bottleneck through development of a hardware analyzer for DCS. This analyzer implements the DCS curving fitting algorithm on digital logic circuit using Field Programmable Gate Array (FPGA) technology. The FPGA analyzer is more efficient than a typical software analysis solution. The analyzer module can be easily duplicated for processing multiple channels of DCS data in real-time. We have demonstrated the utility of this analyzer in pre-clinical large animal studies of spinal cord ischemia. In combination with previously described FPGA implementations of auto-correlators, this hardware analyzer can provide a complete device-on-a-chip solution for DCS signal processing. Such a component will enable new DCS applications demanding mobility and real-time processing.

Entities:  

Keywords:  Diffuse Correlation Spectroscopy; Field Programmable Gate Array; High Performance Computing

Year:  2019        PMID: 32457822      PMCID: PMC7249994          DOI: 10.1109/access.2019.2938085

Source DB:  PubMed          Journal:  IEEE Access        ISSN: 2169-3536            Impact factor:   3.367


  23 in total

1.  Longitudinal optical monitoring of blood flow in breast tumors during neoadjuvant chemotherapy.

Authors:  J M Cochran; S H Chung; A Leproux; W B Baker; D R Busch; A M DeMichele; J Tchou; B J Tromberg; A G Yodh
Journal:  Phys Med Biol       Date:  2017-04-12       Impact factor: 3.609

2.  Photon migration through a turbid slab described by a model based on diffusion approximation. I. Theory.

Authors:  D Contini; F Martelli; G Zaccanti
Journal:  Appl Opt       Date:  1997-07-01       Impact factor: 1.980

3.  Diffuse optical monitoring of hemodynamic changes in piglet brain with closed head injury.

Authors:  Chao Zhou; Stephanie A Eucker; Turgut Durduran; Guoqiang Yu; Jill Ralston; Stuart H Friess; Rebecca N Ichord; Susan S Margulies; Arjun G Yodh
Journal:  J Biomed Opt       Date:  2009 May-Jun       Impact factor: 3.170

4.  Note: a 4 ns hardware photon correlator based on a general-purpose field-programmable gate array development board implemented in a compact setup for fluorescence correlation spectroscopy.

Authors:  Stanislav Kalinin; Ralf Kühnemuth; Hayk Vardanyan; Claus A M Seidel
Journal:  Rev Sci Instrum       Date:  2012-09       Impact factor: 1.523

5.  Combined multi-distance frequency domain and diffuse correlation spectroscopy system with simultaneous data acquisition and real-time analysis.

Authors:  Stefan A Carp; Parisa Farzam; Norin Redes; Dennis M Hueber; Maria Angela Franceschini
Journal:  Biomed Opt Express       Date:  2017-08-07       Impact factor: 3.732

6.  Liquid phantoms for near-infrared and diffuse correlation spectroscopies with tunable optical and dynamic properties.

Authors:  Lorenzo Cortese; Giuseppe Lo Presti; Marco Pagliazzi; Davide Contini; Alberto Dalla Mora; Antonio Pifferi; Sanathana Konugolu Venkata Sekar; Lorenzo Spinelli; Paola Taroni; Marta Zanoletti; Udo M Weigel; Sixte de Fraguier; An Nguyen-Dihn; Bogdan Rosinski; Turgut Durduran
Journal:  Biomed Opt Express       Date:  2018-04-04       Impact factor: 3.732

7.  Validation of diffuse correlation spectroscopy for muscle blood flow with concurrent arterial spin labeled perfusion MRI.

Authors:  Guoqiang Yu; Thomas F Floyd; Turgut Durduran; Chao Zhou; Jiongjiong Wang; John A Detre; Arjun G Yodh
Journal:  Opt Express       Date:  2007-02-05       Impact factor: 3.894

8.  Cerebral hemodynamics in preterm infants during positional intervention measured with diffuse correlation spectroscopy and transcranial Doppler ultrasound.

Authors:  Erin M Buckley; Noah M Cook; Turgut Durduran; Meeri N Kim; Chao Zhou; Regine Choe; Guoqiang Yu; Susan Schultz; Chandra M Sehgal; Daniel J Licht; Peter H Arger; Mary E Putt; Hallam H Hurt; Arjun G Yodh
Journal:  Opt Express       Date:  2009-07-20       Impact factor: 3.894

9.  Time to surgery and preoperative cerebral hemodynamics predict postoperative white matter injury in neonates with hypoplastic left heart syndrome.

Authors:  Jennifer M Lynch; Erin M Buckley; Peter J Schwab; Ann L McCarthy; Madeline E Winters; David R Busch; Rui Xiao; Donna A Goff; Susan C Nicolson; Lisa M Montenegro; Stephanie Fuller; J William Gaynor; Thomas L Spray; Arjun G Yodh; Maryam Y Naim; Daniel J Licht
Journal:  J Thorac Cardiovasc Surg       Date:  2014-06-27       Impact factor: 5.209

10.  Transcranial optical monitoring of cerebrovascular hemodynamics in acute stroke patients.

Authors:  Turgut Durduran; Chao Zhou; Brian L Edlow; Guoqiang Yu; Regine Choe; Meeri N Kim; Brett L Cucchiara; Mary E Putt; Qaisar Shah; Scott E Kasner; Joel H Greenberg; Arjun G Yodh; John A Detre
Journal:  Opt Express       Date:  2009-03-02       Impact factor: 3.894

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  4 in total

1.  Multi-Site Optical Monitoring of Spinal Cord Ischemia during Spine Distraction.

Authors:  David R Busch; Wei Lin; Chunyu Cai; Alissa Cutrone; Jakub Tatka; Brandon J Kovarovic; Arjun G Yodh; Thomas F Floyd; James Barsi
Journal:  J Neurotrauma       Date:  2020-07-20       Impact factor: 5.269

2.  Impact of changes in tissue optical properties on near-infrared diffuse correlation spectroscopy measures of skeletal muscle blood flow.

Authors:  Miles F Bartlett; Scott M Jordan; Dennis M Hueber; Michael D Nelson
Journal:  J Appl Physiol (1985)       Date:  2021-02-11

3.  Towards rapid intraoperative axial localization of spinal cord ischemia with epidural diffuse correlation monitoring.

Authors:  David R Busch; Wei Lin; Chia Chieh Goh; Feng Gao; Nicholas Larson; Joseph Wahl; Thomas V Bilfinger; Arjun G Yodh; Thomas F Floyd
Journal:  PLoS One       Date:  2021-05-10       Impact factor: 3.240

4.  FPGA Correlator for Applications in Embedded Smart Devices.

Authors:  Christopher H Moore; Wei Lin
Journal:  Biosensors (Basel)       Date:  2022-04-12
  4 in total

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