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Literature DB >> 32451477

Illumination guidelines for ultrafast pump-probe experiments by serial femtosecond crystallography.

Marie Luise Grünbein¹, Miriam Stricker¹, Gabriela Nass Kovacs¹, Marco Kloos¹, R Bruce Doak¹, Robert L Shoeman¹, Jochen Reinstein¹, Sylvain Lecler², Stefan Haacke³, Ilme Schlichting⁴.

Abstract

Time-resolved crystallography with X-ray free-electron lasers enables structural characterization of light-induced reactions on ultrafast timescales. To be biologically and chemically relevant, such studies must be carried out in an appropriate photoexcitation regime to avoid multiphoton artifacts, a common issue in recent studies. We describe numerical and experimental approaches to determine how many photons are needed for single-photon excitation in microcrystals, taking into account losses by scattering.

Mesh：

Year: 2020 PMID： 32451477 DOI： 10.1038/s41592-020-0847-3

Source DB: PubMed Journal: Nat Methods ISSN： 1548-7091 Impact factor: 28.547

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Cited

12 in total

1. Dynamic Structural Biology Experiments at XFEL or Synchrotron Sources.

Authors: Pierre Aller; Allen M Orville
Journal: Methods Mol Biol Date: 2021

2. Crystallographic Studies of Rhodopsins: Structure and Dynamics.

Authors: Marie Luise Grünbein; Gabriela Nass Kovacs; Marco Kloos; Alexander Gorel; R Bruce Doak; Robert L Shoeman; Thomas R M Barends; Ilme Schlichting
Journal: Methods Mol Biol Date: 2022

Review 3. Mapping Enzyme Landscapes by Time-Resolved Crystallography with Synchrotron and X-Ray Free Electron Laser Light.

Authors: Mark A Wilson
Journal: Annu Rev Biophys Date: 2021-12-21 Impact factor: 19.763

4. High-resolution crystal structures of transient intermediates in the phytochrome photocycle.

Authors: Melissa Carrillo; Suraj Pandey; Juan Sanchez; Moraima Noda; Ishwor Poudyal; Luis Aldama; Tek Narsingh Malla; Elin Claesson; Weixiao Yuan Wahlgren; Denisse Feliz; Vukica Šrajer; Michał Maj; Leticia Castillon; So Iwata; Eriko Nango; Rie Tanaka; Tomoyuki Tanaka; Luo Fangjia; Kensuke Tono; Shigeki Owada; Sebastian Westenhoff; Emina A Stojković; Marius Schmidt
Journal: Structure Date: 2021-03-22 Impact factor: 5.006

5. Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.

Authors: P Mehrabi; R Bücker; G Bourenkov; H M Ginn; D von Stetten; H M Müller-Werkmeister; A Kuo; T Morizumi; B T Eger; W-L Ou; S Oghbaey; A Sarracini; J E Besaw; O Pare-Labrosse; S Meier; H Schikora; F Tellkamp; A Marx; D A Sherrell; D Axford; R L Owen; O P Ernst; E F Pai; E C Schulz; R J D Miller
Journal: Sci Adv Date: 2021-03-17 Impact factor: 14.136

6. Capturing structural changes of the S₁ to S₂ transition of photosystem II using time-resolved serial femtosecond crystallography.

Authors: Hongjie Li; Yoshiki Nakajima; Takashi Nomura; Michihiro Sugahara; Shinichiro Yonekura; Siu Kit Chan; Takanori Nakane; Takahiro Yamane; Yasufumi Umena; Mamoru Suzuki; Tetsuya Masuda; Taiki Motomura; Hisashi Naitow; Yoshinori Matsuura; Tetsunari Kimura; Kensuke Tono; Shigeki Owada; Yasumasa Joti; Rie Tanaka; Eriko Nango; Fusamichi Akita; Minoru Kubo; So Iwata; Jian-Ren Shen; Michihiro Suga
Journal: IUCrJ Date: 2021-04-07 Impact factor: 4.769

Illumination guidelines for ultrafast pump-probe experiments by serial femtosecond crystallography.

1. Dynamic Structural Biology Experiments at XFEL or Synchrotron Sources.

2. Crystallographic Studies of Rhodopsins: Structure and Dynamics.

Review 3. Mapping Enzyme Landscapes by Time-Resolved Crystallography with Synchrotron and X-Ray Free Electron Laser Light.

4. High-resolution crystal structures of transient intermediates in the phytochrome photocycle.

5. Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.

6. Capturing structural changes of the S₁ to S₂ transition of photosystem II using time-resolved serial femtosecond crystallography.

Review 7. Best practices for time-resolved serial synchrotron crystallography.

8. Filming ultrafast roaming-mediated isomerization of bismuth triiodide in solution.

Review 9. Discerning best practices in XFEL-based biological crystallography - standards for nonstandard experiments.

Review 10. Using photocaging for fast time-resolved structural biology studies.

Illumination guidelines for ultrafast pump-probe experiments by serial femtosecond crystallography.

1. Dynamic Structural Biology Experiments at XFEL or Synchrotron Sources.

2. Crystallographic Studies of Rhodopsins: Structure and Dynamics.

Review 3. Mapping Enzyme Landscapes by Time-Resolved Crystallography with Synchrotron and X-Ray Free Electron Laser Light.

4. High-resolution crystal structures of transient intermediates in the phytochrome photocycle.

5. Serial femtosecond and serial synchrotron crystallography can yield data of equivalent quality: A systematic comparison.

6. Capturing structural changes of the S1 to S2 transition of photosystem II using time-resolved serial femtosecond crystallography.

Review 7. Best practices for time-resolved serial synchrotron crystallography.

8. Filming ultrafast roaming-mediated isomerization of bismuth triiodide in solution.

Review 9. Discerning best practices in XFEL-based biological crystallography - standards for nonstandard experiments.

Review 10. Using photocaging for fast time-resolved structural biology studies.

6. Capturing structural changes of the S₁ to S₂ transition of photosystem II using time-resolved serial femtosecond crystallography.