Literature DB >> 32451476

Intelligent image-based deformation-assisted cell sorting with molecular specificity.

Ahmad Ahsan Nawaz1,2, Marta Urbanska3,4, Maik Herbig3, Martin Nötzel3, Martin Kräter3,4, Philipp Rosendahl3,5, Christoph Herold5, Nicole Toepfner3,6, Markéta Kubánková4, Ruchi Goswami3,4,7, Shada Abuhattum3,4, Felix Reichel3,4, Paul Müller3,4, Anna Taubenberger3, Salvatore Girardo3,4,7, Angela Jacobi3,4, Jochen Guck8,9.   

Abstract

Although label-free cell sorting is desirable for providing pristine cells for further analysis or use, current approaches lack molecular specificity and speed. Here, we combine real-time fluorescence and deformability cytometry with sorting based on standing surface acoustic waves and transfer molecular specificity to image-based sorting using an efficient deep neural network. In addition to general performance, we demonstrate the utility of this method by sorting neutrophils from whole blood without labels.

Mesh:

Year:  2020        PMID: 32451476     DOI: 10.1038/s41592-020-0831-y

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  17 in total

1.  Super-resolution optofluidic scanning microscopy.

Authors:  Biagio Mandracchia; Jeonghwan Son; Shu Jia
Journal:  Lab Chip       Date:  2021-02-09       Impact factor: 6.799

2.  Scaling microfluidic throughput with flow-balanced manifolds to simply control devices with multiple inlets and outlets.

Authors:  Katherine M Young; Peter G Shankles; Theresa Chen; Kelly Ahkee; Sydney Bules; Todd Sulchek
Journal:  Biomicrofluidics       Date:  2022-05-16       Impact factor: 3.258

3.  Cell morphology-based machine learning models for human cell state classification.

Authors:  Yi Li; Chance M Nowak; Uyen Pham; Khai Nguyen; Leonidas Bleris
Journal:  NPJ Syst Biol Appl       Date:  2021-05-26

4.  The in vitro micronucleus assay using imaging flow cytometry and deep learning.

Authors:  Matthew A Rodrigues; Christine E Probst; Artiom Zayats; Bryan Davidson; Michael Riedel; Yang Li; Vidya Venkatachalam
Journal:  NPJ Syst Biol Appl       Date:  2021-05-18

Review 5.  Image-Based Live Cell Sorting.

Authors:  Cody A LaBelle; Angelo Massaro; Belén Cortés-Llanos; Christopher E Sims; Nancy L Allbritton
Journal:  Trends Biotechnol       Date:  2020-11-13       Impact factor: 21.942

6.  Hydrodynamic assisted multiparametric particle spectrometry.

Authors:  Alberto Martín-Pérez; Daniel Ramos; Marina L Yubero; Sergio García-López; Priscila M Kosaka; Javier Tamayo; Montserrat Calleja
Journal:  Sci Rep       Date:  2021-02-11       Impact factor: 4.379

7.  Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae.

Authors:  Chuyi Chen; Yuyang Gu; Julien Philippe; Peiran Zhang; Hunter Bachman; Jinxin Zhang; John Mai; Joseph Rufo; John F Rawls; Erica E Davis; Nicholas Katsanis; Tony Jun Huang
Journal:  Nat Commun       Date:  2021-02-18       Impact factor: 17.694

Review 8.  Sensitivity-Enhancing Strategies in Optical Biosensing.

Authors:  Youngsun Kim; John Gonzales; Yuebing Zheng
Journal:  Small       Date:  2020-12-28       Impact factor: 13.281

9.  AIDeveloper: Deep Learning Image Classification in Life Science and Beyond.

Authors:  Martin Kräter; Shada Abuhattum; Despina Soteriou; Angela Jacobi; Thomas Krüger; Jochen Guck; Maik Herbig
Journal:  Adv Sci (Weinh)       Date:  2021-03-18       Impact factor: 16.806

10.  Single-Cell Mechanophenotyping in Microfluidics to Evaluate Behavior of U87 Glioma Cells.

Authors:  Esra Sengul; Meltem Elitas
Journal:  Micromachines (Basel)       Date:  2020-09-11       Impact factor: 2.891

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