Literature DB >> 33602914

Acoustofluidic rotational tweezing enables high-speed contactless morphological phenotyping of zebrafish larvae.

Chuyi Chen1, Yuyang Gu1, Julien Philippe2, Peiran Zhang1, Hunter Bachman1, Jinxin Zhang1, John Mai3, Joseph Rufo1, John F Rawls4, Erica E Davis2,5,6, Nicholas Katsanis2,5,6, Tony Jun Huang7.   

Abstract

Modern biomedical research and preclinical pharmaceutical development rely heavily on the phenotyping of small vertebrate models for various diseases prior to human testing. In this article, we demonstrate an acoustofluidic rotational tweezing platform that enables contactless, high-speed, 3D multispectral imaging and digital reconstruction of zebrafish larvae for quantitative phenotypic analysis. The acoustic-induced polarized vortex streaming achieves contactless and rapid (~1 s/rotation) rotation of zebrafish larvae. This enables multispectral imaging of the zebrafish body and internal organs from different viewing perspectives. Moreover, we develop a 3D reconstruction pipeline that yields accurate 3D models based on the multi-view images for quantitative evaluation of basic morphological characteristics and advanced combinations of metrics. With its contactless nature and advantages in speed and automation, our acoustofluidic rotational tweezing system has the potential to be a valuable asset in numerous fields, especially for developmental biology, small molecule screening in biochemistry, and pre-clinical drug development in pharmacology.

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Year:  2021        PMID: 33602914      PMCID: PMC7892888          DOI: 10.1038/s41467-021-21373-3

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   17.694


  64 in total

Review 1.  Technologies for micromanipulating, imaging, and phenotyping small invertebrates and vertebrates.

Authors:  Mehmet Fatih Yanik; Christopher B Rohde; Carlos Pardo-Martin
Journal:  Annu Rev Biomed Eng       Date:  2011-08-15       Impact factor: 9.590

2.  Selective particle and cell capture in a continuous flow using micro-vortex acoustic streaming.

Authors:  David J Collins; Bee Luan Khoo; Zhichao Ma; Andreas Winkler; Robert Weser; Hagen Schmidt; Jongyoon Han; Ye Ai
Journal:  Lab Chip       Date:  2017-05-16       Impact factor: 6.799

3.  Acoustic radiation- and streaming-induced microparticle velocities determined by microparticle image velocimetry in an ultrasound symmetry plane.

Authors:  Rune Barnkob; Per Augustsson; Thomas Laurell; Henrik Bruus
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-11-13

4.  Focusing of sub-micrometer particles and bacteria enabled by two-dimensional acoustophoresis.

Authors:  M Antfolk; P B Muller; P Augustsson; H Bruus; T Laurell
Journal:  Lab Chip       Date:  2014-06-04       Impact factor: 6.799

5.  Monitoring neural activity with bioluminescence during natural behavior.

Authors:  Eva A Naumann; Adam R Kampff; David A Prober; Alexander F Schier; Florian Engert
Journal:  Nat Neurosci       Date:  2010-03-21       Impact factor: 24.884

6.  Histone deacetylase 3 (hdac3) is specifically required for liver development in zebrafish.

Authors:  Muhammad Farooq; K N Sulochana; Xiufang Pan; Jiawei To; Donglai Sheng; Zhiyuan Gong; Ruowen Ge
Journal:  Dev Biol       Date:  2008-02-29       Impact factor: 3.582

7.  Digital acoustofluidics enables contactless and programmable liquid handling.

Authors:  Steven Peiran Zhang; James Lata; Chuyi Chen; John Mai; Feng Guo; Zhenhua Tian; Liqiang Ren; Zhangming Mao; Po-Hsun Huang; Peng Li; Shujie Yang; Tony Jun Huang
Journal:  Nat Commun       Date:  2018-07-26       Impact factor: 14.919

8.  Acoustofluidic separation of cells and particles.

Authors:  Mengxi Wu; Adem Ozcelik; Joseph Rufo; Zeyu Wang; Rui Fang; Tony Jun Huang
Journal:  Microsyst Nanoeng       Date:  2019-06-03       Impact factor: 7.127

9.  High-throughput hyperdimensional vertebrate phenotyping.

Authors:  Carlos Pardo-Martin; Amin Allalou; Jaime Medina; Peter M Eimon; Carolina Wählby; Mehmet Fatih Yanik
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

10.  Rotational manipulation of single cells and organisms using acoustic waves.

Authors:  Daniel Ahmed; Adem Ozcelik; Nagagireesh Bojanala; Nitesh Nama; Awani Upadhyay; Yuchao Chen; Wendy Hanna-Rose; Tony Jun Huang
Journal:  Nat Commun       Date:  2016-03-23       Impact factor: 14.919

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  6 in total

Review 1.  Ultrasound-Responsive Systems as Components for Smart Materials.

Authors:  Athanasios G Athanassiadis; Zhichao Ma; Nicolas Moreno-Gomez; Kai Melde; Eunjin Choi; Rahul Goyal; Peer Fischer
Journal:  Chem Rev       Date:  2021-11-12       Impact factor: 60.622

2.  Sonoporation: Past, Present, and Future.

Authors:  Joseph Rich; Zhenhua Tian; Tony Jun Huang
Journal:  Adv Mater Technol       Date:  2021-09-14

3.  Flexible thin-film acoustic wave devices with off-axis bending characteristics for multisensing applications.

Authors:  Zhangbin Ji; Jian Zhou; Huamao Lin; Jianhui Wu; Dinghong Zhang; Sean Garner; Alex Gu; Shurong Dong; YongQing Fu; Huigao Duan
Journal:  Microsyst Nanoeng       Date:  2021-11-26       Impact factor: 7.127

4.  Fish Capsules: A System for High-Throughput Screening of Combinatorial Drugs.

Authors:  Minghui Tang; Xin Duan; Anqi Yang; Shijie He; Yajing Zhou; Yuxin Liu; Lu Zhang; Xuan Luo; Peng Shi; Honglin Li; Xudong Lin
Journal:  Adv Sci (Weinh)       Date:  2022-01-27       Impact factor: 16.806

5.  Manipulation of single cells via a Stereo Acoustic Streaming Tunnel (SteAST).

Authors:  Yang Yang; Wei Pang; Hongxiang Zhang; Weiwei Cui; Ke Jin; Chongling Sun; Yanyan Wang; Lin Zhang; Xiubao Ren; Xuexin Duan
Journal:  Microsyst Nanoeng       Date:  2022-08-04       Impact factor: 8.006

6.  In vivo acoustic manipulation of microparticles in zebrafish embryos.

Authors:  Viktor Manuel Jooss; Jan Stephan Bolten; Jörg Huwyler; Daniel Ahmed
Journal:  Sci Adv       Date:  2022-03-25       Impact factor: 14.136

  6 in total

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