| Literature DB >> 32448590 |
J Martijn Bos1, Virginia B Hebl2, Ann L Oberg3, Zhifu Sun3, Daniel S Herman4, Polakit Teekakirikul4, Jonathan G Seidman4, Christine E Seidman5, Cristobal G Dos Remedios6, Joseph J Maleszewski7, Hartzell V Schaff8, Joseph A Dearani8, Peter A Noseworthy2, Paul A Friedman2, Steve R Ommen2, Frank V Brozovich2, Michael J Ackerman9.
Abstract
OBJECTIVE: To explore the transcriptomic differences between patients with hypertrophic cardiomyopathy (HCM) and controls. PATIENTS AND METHODS: RNA was extracted from cardiac tissue flash frozen at therapeutic surgical septal myectomy for 106 patients with HCM and 39 healthy donor hearts. Expression profiling of 37,846 genes was performed using the Illumina Human HT-12v3 Expression BeadChip. All patients with HCM were genotyped for pathogenic variants causing HCM. Technical validation was performed using quantitative real-time polymerase chain reaction (qRT-PCR) and Western blot. This study was started on January 1, 1999, and final analysis was completed on April 20, 2020.Entities:
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Year: 2020 PMID: 32448590 PMCID: PMC7186205 DOI: 10.1016/j.mayocp.2020.04.028
Source DB: PubMed Journal: Mayo Clin Proc ISSN: 0025-6196 Impact factor: 7.616
Demographics of HCM and Control Cohorts
| Cases | Controls | |
|---|---|---|
| No. | 106 | 39 |
| Sex (male/female), no. | 54/52 | 19/20 |
| Age, diagnosis (y), median (IQR) | 43 (27-55) | NA |
| Age, myectomy (y), median (IQR) | 51 (32-60) | N/A |
| Age, death (y), median (IQR) | N/A | 38 (23-48) |
| NYHA class III-IV, no. (%) | 82 (77) | NA |
| Family history of HCM, no. (%) | 29 (27) | NA |
| Family history of SCD, no. (%) | 14 (13) | NA |
| Systolic BP (mm Hg), median (IQR) | 120 (109-130) | NA |
| Diastolic BP (mm Hg), median (IQR) | 70 (62-80) | NA |
| Heart rate (beats/min), median (IQR) | 68 (60-76) | NA |
| Ejection fraction (%), median (IQR) | 74 (68-77) | NA |
| LV mass index (g/m2), median (IQR) | 171 (139-225) | NA |
| LV wall thickness (mm), median (IQR) | 22 (18-26) | NA |
| LV outflow tract MIG (mm Hg), median (IQR) | 68 (29-100) | NA |
| Interstitial fibrosis score of moderate or severe, no. (%) | 29 (27) | NA |
| Endocardial fibrosis score of moderate or severe, no. (%) | 67 (63) | NA |
BP = blood pressure; HCM = hypertrophic cardiomyopathy; IQR = interquartile range; LV = left ventricular; MIG = maximum instantaneous gradient; N/A = not applicable; NA = not available; NYHA = New York Heart Association; SCD = sudden cardiac death.
Baseline Characteristics by Major Genotype Subgroups
| MYBPC3-HCM | MYH7-HCM | Genotype Negative | ||
|---|---|---|---|---|
| No. | 23 | 17 | 48 | |
| Sex (male/female) | 13/10 | 7/10 | 27/21 | NS |
| Age, diagnosis (y), median (IQR) | 37 (23-45) | 37 (13-45) | 52 (33-64) | .003 |
| Age, myectomy (y), median (IQR) | 38 (30-53) | 43 (16-52) | 57 (44-67) | .003 |
| NYHA class III-IV, no. (%) | 19 (83) | 12 (71) | 35 (73) | NS |
| Family history of HCM, no. (%) | 11 (48) | 7 (41) | 8 (17) | .01 |
| Family history of SCD, no. (%) | 6 (26) | 1 (6) | 5 (10) | NS |
| Systolic BP (mm Hg), median (IQR) | 120 (110-122) | 118 (102-127) | 125 (113-137) | NS |
| Diastolic BP (mm Hg), median (IQR) | 70 (62-75) | 66 (57-70) | 74 (64-82) | .01 |
| Heart rate (beats/min), median (IQR) | 68 (60-73) | 70 (60-78) | 68 (59-76) | NS |
| Ejection fraction (%), median (IQR) | 70 (65-76) | 75 (75-80) | 73 (70-76) | NS |
| LV mass index (g/m2), median (IQR) | 192 (144-238) | 183 (130-258) | 171 (134-217) | NS |
| LV wall thickness (mm), median (IQR) | 24 (18-27) | 25 (18-29) | 21 (16-24) | NS |
| LV outflow tract MIG (mm Hg), median (IQR) | 40 (16-106) | 81 (70-121) | 64 (30-94) | NS |
| Interstitial fibrosis score moderate or severe, no. (%) | 5 (22) | 4 (24) | 13 (27) | NS |
| Endocardial fibrosis score moderate or severe, no. (%) | 15 (65) | 13 (76) | 30 (63) | NS |
BP = blood pressure; HCM = hypertrophic cardiomyopathy; IQR = interquartile range; LV = left ventricular; MIG = maximum instantaneous gradient; MYBPC3 = myosin binding protein C; MYH7 = beta myosin heavy chain; NS = not significant; NYHA = New York Heart Association; SCD = sudden cardiac death.
Figure 1Top up-regulated and down-regulated genes in hypertrophic cardiomyopathy (HCM). Bar diagram shows the top 10 up-regulated (left) and down-regulated (right) genes in tissues of patients with obstructive HCM compared with controls.
Top 10 Differentially Expressed Messenger RNA Transcripts Up-Regulated in HCM Compared With Controls
| Gene | Official Full Name | Fold Change | q-Value | Gene Ontology Biological Process Term(s) | Gene Ontology Molecular Function Term(s) |
|---|---|---|---|---|---|
| Angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 | +3.53 | 1.30×10−23 | Angiotensin catabolic process in blood; regulation of inflammatory response; regulation of vasoconstriction | Peptidase activity; glycoprotein binding; zinc ion binding | |
| Secreted frizzled-related protein 1 | +3.32 | 5.93×10−21 | Regulation of cell growth; canonical Wnt receptor signaling pathway | Cysteine-type endopeptidase activity; Wnt-protein binding | |
| RAS-like, family 11, member B | +3.30 | 3.44×10−22 | Small GTPase-mediated signal transduction | GTPase activity | |
| Centromere protein A | +3.25 | 3.37×10−16 | Nucleosome assembly | Chromatin binding; DNA binding; protein binding | |
| Apolipoprotein A-I | +3.00 | 1.17×10−12 | Lipid metabolic process | Cholesterol transport activity | |
| Not available | +2.95 | 2.06×10−16 | Not available | Not available | |
| SPARC-related modular calcium binding 2 | +2.80 | 7.56×10−27 | Extracellular matrix organization | Calcium ion binding | |
| Protein S (alpha) | +2.77 | 3.06×10−29 | Blood coagulation | Calcium ion binding | |
| Frizzled-related protein | +2.64 | 2.75×10−24 | Negative regulation of cell growth; negative regulation of Wnt receptor signaling pathway | Wnt-activated receptor activity; Wnt-protein binding | |
| Heat shock 70 kDa protein 2 | +2.62 | 1.07×10−16 | Positive regulation of cyclin-dependent protein kinase activity involved in G2/M | Adenosine triphosphate binding |
HCM = hypertrophic cardiomyopathy; GTPase = hydrolase enzyme that binds to the nucleotide guanosine triphosphate; RAS = rat sarcoma.
Top 10 Differentially Expressed mRNA Transcripts, Down-Regulated in HCM Compared With Controls
| Gene | Official Full Name | Fold Change q-Value | q-Value | Gene Ontology Biological Process Term(s) | Gene Ontology Molecular Function Term(s) |
|---|---|---|---|---|---|
| Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 | −11.81 | 1.73×10−37 | Inflammatory response; regulation of proteolysis; regulation of lipid metabolic process | Peptidase inhibitor activity; DNA binding; protein binding | |
| RAS, dexamethasone-induced 1 | −11.43 | 2.26×10−40 | Small GTPase-mediated signal transduction | GTP binding; GTPase activity | |
| S100 calcium-binding protein A9 | −7.54 | 7.18×10−36 | Cell-cell signaling; leukocyte chemotaxis; actin cytoskeleton reorganization | Calcium ion binding; protein binding; signal transducer activity | |
| S100 calcium-binding protein A8 | −6.27 | 1.23×10−30 | Inflammatory response; response to zinc ion; response to ethanol | Calcium ion binding; protein binding | |
| Metallothionein 1X | −5.18 | 1.02×10−30 | Response to metal ion | Zinc ion binding | |
| CCAAT/enhancer binding protein (C/EBP), delta | −4.95 | 1.13×10−40 | Transcription from RNA polymerase II promoter | Protein dimerization activity; sequence-specific DNA binding | |
| Zinc finger protein 36, C3H type, homolog (mouse) | −4.72 | 2.07×10−40 | 3'-UTR-mediated mRNA stabilization | DNA binding; mRNA binding; protein binding; zinc ion binding | |
| Metallothionein 1M | −4.67 | 2.49×10−35 | Negative regulation of growth | Zinc ion binding | |
| Tubulin, alpha 3d | −4.61 | 1.75×10−39 | Microtubule-based movement | GTP binding; GTPase activity; structural molecule activity | |
| Tubulin, alpha 3e | −4.51 | 0.00 | Microtubule-based movement | GTP binding; GTPase activity; structural molecule activity |
HCM = hypertrophic cardiomyopathy; GTP = guanosine triphosphate; GTPase = hydrolase enzyme that binds to the nucleotide guanosine triphosphate; mRNA = messenger RNA; RAS = rat sarcoma; UTR = untranslated region.
Figure 2Technical validation of the microarray technique. Microarray fold change and quantitative real-time polymerase chain reaction (qRT-PCR) fold change are plotted side by side for the 12 genes tested. The qRT-PCR data validated the microarray data for 11 of 12 genes (92%).
Figure 3Marked accentuation of angiotensin-converting enzyme type 2 (ACE2) in hypertrophic cardiomyopathy (HCM). Bar diagram shows: (A) 5.3-fold increase in ACE2 protein in HCM patients compared with controls by Western blot analysis and (B) significant staining of ACE2 antibody in the myectomy specimen from a patient with obstructive HCM. Flow chart shows (C) the role of ACE2 in converting angiotensin (ang) I to ang (1-9) and angiotensin II to ang (1-7) to counter the effects of angiotensin II. SARS-CoV-2 = severe acute respiratory syndrome coronavirus 2.
Figure 4Angiotensin-converting enzyme type 2 (ACE2) overexpression and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. Central illustration shows possible mechanism behind ACE2 overexpression and SARS-CoV-2 infection picturing normal ACE2 expression (left) and ACE2 protein overexpression in obstructive hypertrophic cardiomyopathy (HCM; right). The SARS-CoV-2 virus hijacks membrane-bound ACE2 for cellular entry. Aside from allowing cellular invasion and viral replication, internalization of the SARS-CoV-2–ACE2 complex causes a decrease in surface ACE2. Loss of surface ACE2: (1) increases the angiotensin II to ang (1-7) ratio and (2) increases angiotensin type 1 receptor (AT1R) activity with a resultant increase in damaging angiotensin II activity. Shown are potential therapeutic targets (and clinical trials) using either angiotensin receptor blockers (ARBs; losartan specifically) or human recombinant soluble ACE2 (hrsACE2). For patients with ACE2-accentuating heart diseases such as obstructive HCM, the speculated increase in viral infectivity of the heart muscle remains to be proven. (Portion of figure adapted from: Simmons G, Zmora P, Gierer S, Heurich A, Pöhlman S. Proteolytic activation of the SARS-coronavirus spike protein: Cutting enzymes at the cutting edge of antiviral research. Antivir Res. 2013;100(3):605-614 with permission from Elsevier, license number 4814880904484).