| Literature DB >> 32448126 |
L Chkioua1, O Grissa2, N Leban2, M Gribaa3, H Boudabous4, H Ben Turkia4, S Ferchichi5, N Tebib4, S Laradi6.
Abstract
BACKGROUND: Mucopolysaccharidosis type II (MPS II) or Hunter syndrome is an X-linked recessive lysosomal storage disorder resulting from deficient activity of iduronate 2-sulfatase (IDS) and the progressive lysosomal accumulation of sulfated glycosaminoglycans (GAGs).Entities:
Keywords: Clinical features; Hunter syndrome; Mucopolysaccharidosis type II; Mutations
Year: 2020 PMID: 32448126 PMCID: PMC7247178 DOI: 10.1186/s12881-020-01051-9
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Primers for PCR and DNA sequencing for detection of IDS mutations
| Primer | Sequence 5′ > 3′ | Tm (°C) | Expected products (bp) |
|---|---|---|---|
| F1-IDS | GAGGAGGTCTCTGTGGCTGC | 63 .5 | 376 |
| R1-IDS | AGGGACGGTAGGAAGGAGTG | 61 .4 | |
| F2-IDS | CACTCACTATCTCGCTTCCTC | 59.8 | 540 |
| R2-IDS | CCTCTAACAAGATGTCCCG | 56.7 | |
| F3-IDS | GGTTACCTAAGAGATGGCAG | 57.3 | 542 |
| R3-IDS | CAGCCTGTGTCCTCCCTAC | 61.0 | |
| F4-IDS | GTAGATGAGGAAACTGAGCC | 57.3 | 475 |
| R4-IDS | CTATTCAATGAGTCTGACACG | 55.9 | |
| F5-IDS | GCCTGGAAAACAAGAAACACC | 57.9 | 487 |
| R5-IDS | TGGCGATGGCAGGATGTAG | 58.8 | |
| F6-IDS | AGGCAGGAGGTGGGGACAG | 63.1 | 607 |
| R6-IDS | CCAGCACTTTGCCTGATAACTC | 60.3 | |
| F7-IDS | CTAAGGGGTAGGGATTGGGAG | 61.8 | 440 |
| R7-IDS | ACCCACACCTATCCGTCAAGC | 61.8 | |
| F8-IDS | GGTGATGAGTTTCTACTTCCT | 55.9 | 465 |
| R8-IDS | GAGATGTTCAGAAAGCGTG | 54.5 | |
| F9-IDS | GTGAGGTGCCGAGGTGGTG | 63.1 | 468 |
| R9-IDS | GGTGCGTATGGAATAGCCC | 58.8 | |
| F9–1-IDS | CTTCAGACATCCCTCAGTGG | 95.4 | 283 |
| R9–1-IDS | GCTCTAACTCCTCCTCTCACC | 61.8 |
Fig. 1MPS II electrophoresis profile on a cellulose acetate plate of urinary GAGs. 1, 2 and 5: MPS II patients; 3: MPS III patients; 4: Control case; CS: chondroïtin sulphate; DS: dermatansulfate; HS: heparan sulfate, KS: Keratan sulfate
Biochemical and molecular MPS II profiles in Tunisian patients
| Patients ID | P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | P9 | P10 | P11 | P12 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sex | M | M | M | M | M | M | M | F | M | M | M | M |
| Consanguinity | unrelated | 1st cousins | 3rd cousins | unrelated | 1st cousins | unrelated | unrelated | 1st cousins | unrelated | unrelated | unrelated | 1st cousins |
| Origin | Tunis | Sfax | Kairouan | Sousse | Tunis | Sfax | Beja | Monastir | Sousse | Sousse | Mahdia | Sousse |
| Urine GAGs1 mg/g/creatinine | 93.4 | 30.0 | 95.0 | 48.0 | 56.8 | 105 | 116 | 125 | 28.4 | 65.8 | 23.3 | 83.9 |
| Age at diagnosis (years/months) | 4 | 1 /6 | 4 | 6 | 3 | 4/ 2 | 4 | 3 | 2 | 3 | 9 | 12 |
| Actual age of patients (years) | 4 | 18 | 22 | 26 | 5 | 5 | 7 | 9 (died) | 9 (died) | 19 (died) | 29 (died) | 39 (died) |
| Leukocytes IDS activity (nmol/h/mg protein) | 0.20 | 0.20 | 0.50 | 0.00 | 0.750 | 0.00 | 0.00 | 0.39 | 0.059 | 0.00 | 0.65 | 1.5 |
| Mutations | c.240 + 1 G > A | p.R88P | Ex1_7dela | p.Q396* | p.G94D | p.D450Nfs*95 | p.Q204* | p.R88Pb | None found | None found | None found | None found |
| Location | INTRON 2 | EXON 3 | * | EXON 9 | EXON 3 | EXON9 | EXON 5 | EXON 3 | ||||
| Restriction enzyme | (−) ECO64I | (−) ACC II | – | (−) Cac8I | (−) BseNI | (−) BamHI | (−) Cac8I | (−) ACC II | These patients were dead before our molecular analysis. | |||
| Fragment length (bp) | N: 373 M: 180 + 193 | N: 91 + 432 M: 523 | – | N: 49 + 54 + 119 + 333 M: 95 + 119 + 173 | N: 37 + 46 + 109 + 331 M: 37 + 155 + 331 | N: 137 + 303 M: 440 | N: 200 + 280 | N: 91 + 432 M: 523 | ||||
| Status | reported | reported | reported | reported | reported | Novel | Novel | reported | ||||
| Reference | [ | [ | [ | [ | [ | This report | This report | [ | ||||
| Polymorphisms | c.419–16 delT; c.641C > T (p.T214M); c.438 C > T (p.T146T); c.709-87G > A; c.1006 + 38 T > C | none | none | c.419–16 delT; c.641C > T (p.T214M); c.438 C > T (p.T146T); c.709-87G > A; c.1006 + 38 T > C | c.419–16 delT; c.641C > T (p.T214M); c.438 C > T (p.T146T); c.709-87G > A; c.1006 + 38 T > C | c.419–16 delT; c.641C > T (p.T214M); c.438 C > T (p.T146T); c.709-87G > A; c.1006 + 38 T > C | ||||||
| Phenotype | severe | severe | Severe | severe | Mild | severe | Severe | severe | ||||
1Urine GAGs: normal value GAGs
a: at position 1,307,880 (GenBank NT:019686), and the distal deletion breakpoint was located at position 1,346,697
N Normal sequence; M Mutated sequence.
b: According to his phenotype, it can be presumed that the P8 was homozygous for p.R88P mutation.
* indicates the stop codon according the standard nomenclature of the nonsense mutation
Clinical findings of the MPS II patients
| MPS II patients | P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | P9 | P10 | P11 | P12 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Age at diagnosis (year/month) | 4 | 1/6 | 4 | 6 | 3 | 4/2 | 4 | 3 | 2 | 3 | 9 | 12 |
| Age (years) | 4 | 18 | 22 | 26 | 5 | 5 | 7 | 9 (died) | 9 (died) | 19 (died) | 29 (died) | 39 (died) |
| ++ | ++ | ++ | ++ | + | ++ | ++ | ++ | ++ | ++ | ++ | ||
| ++ | ++ | ++ | ++ | ++ | ++ | ++ | ++ | ++ | ++ | ++ | ++ | |
| ++ | +++ | +++ | ++ | ++ | ++ | ++ | + | ++ | ++ | ++ | ++ | |
| ++ | +++ | +++ | ++ | + | ++ | +++ | ++ | +++ | +++ | ++ | ++ | |
| multiple dysostosis | ++ | +++ | +++ | ++ | ++ | ++ | +++ | +++ | +++ | +++ | +++ | +++ |
| ++ | ++ | ++ | +++ | ++ | +++ | ++ | ++ | ++ | ++ | +++ | ||
| ++ | +++ | ++ | ++ | + | ++ | ++++ | ++ | ++ | ||||
| ++ | ++ | ++ | ++ | ++ | ++++ | ++++ | ++ | ++ | ++ | ++ | ++ | |
| ++ | ++ | ++ | ++ | ++ | ++++ | ++++ | ++ | ++ | ++ | ++ | ++ | |
| ++ | ++ | ++ | ++ | ++ | + | ++++ | ++ | ++ | ++ | ++ | ++ | |
| Multiple hernia | Blood smear shows an overload | Blood smear shows an overload Dysphasia | Skin involvement | Rhinorrhea umbilical hernia | ||||||||
Fig. 2Positions of IDS mutations
Fig. 3a: Structural superposition of wild type (blue) and the p.D450Nfs*95 mutated IDS protein (green). The deleted part of the mutate protein (red) correspond the C-terminal of the heavy chain (5 amino acids) and the all part of the light chain (14KDa). PyMOL; pdb = 5FQL. b Structural superposition of wild type (blue) and the p.Q204* mutated IDS protein (light blue). The deleted part of the mutate protein (red) correspond the active site and the C-terminal of the heavy chain PyMOL; pdb = 5FQL