| Literature DB >> 32440317 |
Mohammad PouralijanAmiri1, Maryam Khoshkam2, Reza Madadi3, Koorosh Kamali4, Ghassem Faghanzadeh Ganji5, Reza Salek6, Ali Ramazani4,7.
Abstract
OBJECTIVES: Unstable angina (UA) is a form of the acute coronary syndrome (ACS) that affects more than a third of the population before age 70. Due to the limitations of diagnostic tests, appropriate identification of UA is difficult. In this study, we proceeded to investigate metabolite profiling in UA patients compared with controls to determine potential candidate biomarkers.Entities:
Keywords: Biomarker; Metabolites; Metabolomics; NMR spectroscopy; Unstable angina
Year: 2020 PMID: 32440317 PMCID: PMC7229510 DOI: 10.22038/IJBMS.2020.39979.9475
Source DB: PubMed Journal: Iran J Basic Med Sci ISSN: 2008-3866 Impact factor: 2.699
Demographic information and clinical characteristics of unstable angina (UA) patients and controls
|
|
|
| |||
|---|---|---|---|---|---|
|
|
| ||||
|
| 64.07 ± 10.5 | 54.13 ± 11.7 | < 0.001 | ||
|
|
| 54 (57.4 %) | 14 (43.8 %) | 0.179 | |
|
| 40 (42.6 %) | 18 (56.3 %) | |||
|
| 26.44 ± 3.9 | 28.56±4.9 | 0.023 | ||
|
| 9 (12.3 %) | 5 (15.6 %) | 0.756 | ||
|
| 3 (4.1 %) | 4 (12.5 %) | 0.196 | ||
|
| 44 (60.3 %) | 15 (46.9 %) | 0.203 | ||
|
| 47 (64.4 %) | 17 (53.1 %) | 0.276 | ||
|
| 41 (60.3 %) | 24 (77.4 %) | 0.096 | ||
|
| 136.67±58.1 | 113.13±41.5 | 0.337 | ||
|
| 182.25±59.5 | 215.88±99.6 | 0.355 | ||
|
| 45.50±10.6 | 43.50±8.7 | 0.664 | ||
|
| 101.91±47.1 | 133.86±83.8 | 0.313 | ||
|
| 48.20±8.3 | 49.29±11.0 | 0.635 | ||
|
| 91.45±7.2 | N/A | _ | ||
|
| 67.27±36.8 | N/A | _ | ||
|
| 68.97±39.2 | N/A | _ | ||
|
|
| 6 (8.2 %) | N/A | _ | |
|
| 16 (21.9 %) | N/A | _ | ||
|
| 51 (69.9 %) | N/A | _ | ||
BMI: Body mass index; HDL: High density lipoprotein; LDL: Low density lipoprotein; N/A: Not applicable; LAD: Left anterior descending; LCX: Left circumflex artery; RCA: Right coronary artery
Figure 1.Raw data before any pre-prossecing treatment and analysis
Figure 2Important variables were selected according to VIP≥1. Vertical red line show the VIP=1. VIP more than 1 selected for analysis
Figure 3Score plot from applying PLS-DA to data. LV and EV are bbreviations for Latent Variable and Explained Variance, respectively. Red circles indicating UA patients and blue one indicating the controls
Figure 4Loading plot from applying PLS-DA to data. The circled points are the points whose corresponding chemical shifts were selected based on their VIP values more than 1
The altered metabolic pathways in unstable angina (UA) patients in comparison to controls
|
|
|
|
|
|
|
|
|---|---|---|---|---|---|---|
| 1 | Steroid hormone biosynthesis | 9.1778E-7 | 13.901 | 7.3422E-5 | 7.3422E-5 | 0.27779 |
| 2 | Aminoacyl-tRNA biosynthesis | 0.024081 | 3.7264 | 1.0 | 0.84683 | 0.0 |
| 3 | Lysine degredation | 0.031756 | 3.4497 | 1.0 | 0.84683 | 0.01613 |
| 4 | Phenylalanine, tyrosine and tryptophan biosynthesis | 0.060425 | 2.8064 | 1.0 | 1.0 | 0.00738 |
Selected important metabolites obtained from unstable angina (UA) patients
|
|
|
|
|
|
|---|---|---|---|---|
| 1 | Deoxycorticosterone | HMDB0000016 | Steroid hormone biosynthesis | ↑ |
| 2 | 17-Hydroxyprogesterone | HMDB0000374 | Steroid hormone biosynthesis | ↓ |
| 3 | Androstenedione | HMDB0000053 | Steroid hormone biosynthesis | ↑ |
| 4 | Androstanedione | HMDB0000899 | Steroid hormone biosynthesis | ↓ |
| 5 | Etiocholanolone | HMDB0000490 | Steroid hormone biosynthesis | ↑ |
| 6 | Estradiol | HMDB0000151 | Steroid hormone biosynthesis | ↓ |
| 7 | 2-Hydroxyestradiol | HMDB0000338 | Steroid hormone biosynthesis | ↑ |
| 8 | 2-Hydroxyestrone | HMDB0000343 | Steroid hormone biosynthesis | ↓ |
| 9 | 2-Methoxyestradiol | HMDB0000405 | Steroid hormone biosynthesis | ↓ |
| 10 | 2-Methoxyestrone | HMDB0000010 | Steroid hormone biosynthesis | ↓ |
| 11 | L-Arginine | HMDB0000517 | Aminoacyl-tRNA biosynthesis | ↓ |
| 12 | L-Methionine | HMDB0000696 | Aminoacyl-tRNA biosynthesis | ↑ |
| 13 | L-Tryptophan | HMDB0000929 | Aminoacyl-tRNA biosynthesis | ↓ |
| 14 | L-Tyrosine | HMDB0000866 | Aminoacyl-tRNA biosynthesis | ↓ |
| 15 | Aminoadipic acid | HMDB0062715 | Lysine degradation | ↓ |
| 16 | N6-Acetyl-L-lysine | HMDB0033891 | Lysine degradation | ↓ |
| 17 | L-Pipecolic acid | HMDB0000716 | Lysine degradation | ↓ |
Figure 5Graphical overview of metabolic pathway topology analysis of unstable angina (UA) metabotypes. The graph was generated using MetaboAnalyst 4.0 web-based software
Figure 6The obtained ROC curve to diagnose unstable angina (UA) patients. A: AUC, B: Specificity (red) and sensitivity (blue)