| Literature DB >> 32431926 |
K Anitha1, S Sivakumar1,2, R Arulraj3, K Rajkumar1, Manpreet Kaur4, Jerry P Jasinski4.
Abstract
The title compound, C21H23F2NO, consists of two fluoro-phenyl groups and one butyl group equatorially oriented on a piperidine ring, which adopts a chair conformation. The dihedral angle between the mean planes of the phenyl rings is 72.1 (1)°. In the crystal, N-H⋯O and weak C-H⋯F inter-actions, which form R 2 2[14] motifs, link the mol-ecules into infinite C(6) chains propagating along [001]. A weak C-H⋯π inter-action is also observed. A Hirshfeld surface analysis of the crystal structure indicates that the most significant contributions to the crystal packing are from H⋯H (53.3%), H⋯C/C⋯H (19.1%), H⋯F/F⋯H (15.7%) and H⋯O/O⋯H (7.7%) contacts. Density functional theory geometry-optimized calculations were compared to the experimentally determined structure in the solid state and used to determine the HOMO-LUMO energy gap and compare it to the UV-vis experimental spectrum. © Anitha et al. 2020.Entities:
Keywords: Hirshfeld surface; crystal structure; piperidin-4-one
Year: 2020 PMID: 32431926 PMCID: PMC7199252 DOI: 10.1107/S2056989020004636
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1A view of the molecular structure of C21H23F2NO, showing displacement ellipsoids drawn at the 30% probability level.
Hydrogen-bond geometry (Å, °)
Cg3 is the centroid of the C12–C17 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O1i | 1.05 | 2.06 | 3.0921 (16) | 165 |
| C7—H7⋯F1ii | 0.95 | 2.52 | 3.3291 (18) | 143 |
| C10—H10⋯O1iii | 0.95 | 2.66 | 3.470 (2) | 144 |
| C16—H16⋯F2iv | 0.95 | 2.62 | 3.3680 (18) | 136 |
| C21—H21 | 0.98 | 2.58 | 3.489 (2) | 154 |
| C21—H21 | 0.98 | 2.95 | 3.793 (2) | 145 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .
Figure 2Crystal packing for C21H23F2NO viewed along the a-axis direction. Dashed lines indicate N—H⋯O hydrogen bonds and weak C—H⋯F interactions forming (14) loops and infinite C(6) chains (via the N—H⋯O bond) along the c-axis direction.
Figure 3A view of the three-dimensional Hirshfeld surface for C21H23F2NO, plotted over d norm in the range −0.39 to 1.31 a.u.
Figure 4A view of the two-dimensional fingerprint plots for C21H23F2NO, showing (a) all interactions, and separated into (b) H⋯H, (c) H⋯C/C⋯H, (d) H⋯F/F⋯H, (e) O⋯H/H⋯O, (f) F⋯F, (g) C—C and (h) O⋯O interactions. The d i and d e values are the closest internal and external distances (in Å) from given points on the Hirshfeld surface contacts.
Figure 5Schematic MO diagram.
Figure 6UV–vis spectrum of C21H23F2NO
Experimental details
| Crystal data | |
| Chemical formula | C21H23F2NO |
|
| 343.40 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 173 |
|
| 5.4945 (3), 25.0707 (13), 12.9811 (9) |
| β (°) | 93.497 (6) |
|
| 1784.83 (18) |
|
| 4 |
| Radiation type | Cu |
| μ (mm−1) | 0.76 |
| Crystal size (mm) | 0.42 × 0.36 × 0.35 |
| Data collection | |
| Diffractometer | Rigaku Oxford Diffraction Gemini Eos |
| Absorption correction | Multi-scan ( |
|
| 0.803, 1.000 |
| No. of measured, independent and observed [ | 6900, 3404, 3045 |
|
| 0.027 |
| (sin θ/λ)max (Å−1) | 0.614 |
| Refinement | |
|
| 0.045, 0.126, 1.04 |
| No. of reflections | 3404 |
| No. of parameters | 228 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.26, −0.24 |
Computer programs: CrysAlis PRO (Rigaku OD, 2019 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL (Sheldrick, 2015b ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| C21H23F2NO | |
| Monoclinic, | Cu |
| Cell parameters from 3131 reflections | |
| θ = 0.8–1.0° | |
| µ = 0.76 mm−1 | |
| β = 93.497 (6)° | |
| Prism, colourless | |
| 0.42 × 0.36 × 0.35 mm |
| Rigaku Oxford Diffraction Gemini Eos diffractometer | 3404 independent reflections |
| Radiation source: fine-focus sealed X-ray tube | 3045 reflections with |
| Detector resolution: 16.0416 pixels mm-1 | |
| ω scans | θmax = 71.3°, θmin = 3.5° |
| Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2019) | |
| 6900 measured reflections |
| Refinement on | Hydrogen site location: mixed |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.26 e Å−3 | |
| 3404 reflections | Δρmin = −0.24 e Å−3 |
| 228 parameters | Extinction correction: SHELXL (Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.0035 (5) |
| Primary atom site location: dual |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| F1 | 1.1088 (2) | 0.45264 (4) | 0.91794 (7) | 0.0458 (3) | |
| F2 | 0.2626 (2) | 0.04577 (4) | 0.65950 (9) | 0.0493 (3) | |
| O1 | 0.9789 (3) | 0.28871 (5) | 0.32525 (9) | 0.0439 (3) | |
| N1 | 0.8301 (2) | 0.26447 (5) | 0.61588 (9) | 0.0265 (3) | |
| H1 | 0.859899 | 0.250816 | 0.692480 | 0.032* | |
| C1 | 1.0000 (3) | 0.30675 (6) | 0.58925 (11) | 0.0267 (3) | |
| H1A | 1.163280 | 0.290264 | 0.580635 | 0.032* | |
| C2 | 0.9099 (3) | 0.33248 (6) | 0.48525 (11) | 0.0278 (3) | |
| H2 | 0.745757 | 0.348399 | 0.494336 | 0.033* | |
| C3 | 0.8784 (3) | 0.28808 (6) | 0.40558 (11) | 0.0312 (3) | |
| C4 | 0.7247 (3) | 0.24148 (6) | 0.43663 (12) | 0.0341 (4) | |
| H4A | 0.729221 | 0.212850 | 0.384262 | 0.041* | |
| H4B | 0.553231 | 0.252968 | 0.440962 | 0.041* | |
| C5 | 0.8253 (3) | 0.22036 (6) | 0.54247 (11) | 0.0282 (3) | |
| H5 | 0.996468 | 0.207883 | 0.535604 | 0.034* | |
| C6 | 0.6767 (3) | 0.17398 (6) | 0.57869 (11) | 0.0261 (3) | |
| C7 | 0.7422 (3) | 0.12243 (6) | 0.55255 (12) | 0.0303 (3) | |
| H7 | 0.883737 | 0.116949 | 0.515379 | 0.036* | |
| C8 | 0.6046 (3) | 0.07877 (6) | 0.57975 (13) | 0.0344 (4) | |
| H8 | 0.649053 | 0.043603 | 0.561167 | 0.041* | |
| C9 | 0.4023 (3) | 0.08793 (6) | 0.63432 (12) | 0.0340 (4) | |
| C10 | 0.3355 (3) | 0.13790 (7) | 0.66510 (13) | 0.0351 (4) | |
| H10 | 0.198118 | 0.142774 | 0.705110 | 0.042* | |
| C11 | 0.4740 (3) | 0.18125 (6) | 0.63626 (12) | 0.0314 (3) | |
| H11 | 0.429534 | 0.216223 | 0.656111 | 0.038* | |
| C12 | 1.0247 (3) | 0.34625 (6) | 0.67737 (11) | 0.0265 (3) | |
| C13 | 1.2301 (3) | 0.34492 (6) | 0.74451 (13) | 0.0350 (4) | |
| H13 | 1.353733 | 0.319324 | 0.734112 | 0.042* | |
| C14 | 1.2594 (3) | 0.38022 (7) | 0.82671 (13) | 0.0389 (4) | |
| H14 | 1.400409 | 0.378901 | 0.872784 | 0.047* | |
| C15 | 1.0794 (3) | 0.41700 (6) | 0.83961 (12) | 0.0327 (4) | |
| C16 | 0.8701 (3) | 0.41935 (6) | 0.77634 (12) | 0.0347 (4) | |
| H16 | 0.747117 | 0.444956 | 0.787708 | 0.042* | |
| C17 | 0.8432 (3) | 0.38332 (6) | 0.69539 (12) | 0.0312 (3) | |
| H17 | 0.698502 | 0.383920 | 0.651444 | 0.037* | |
| C18 | 1.0774 (3) | 0.37699 (6) | 0.45103 (12) | 0.0300 (3) | |
| H18A | 1.214626 | 0.360763 | 0.416194 | 0.036* | |
| H18B | 1.146589 | 0.395904 | 0.513051 | 0.036* | |
| C19 | 0.9510 (3) | 0.41772 (6) | 0.37807 (12) | 0.0347 (4) | |
| H19A | 1.075666 | 0.442006 | 0.352266 | 0.042* | |
| H19B | 0.873544 | 0.398610 | 0.317901 | 0.042* | |
| C20 | 0.7587 (3) | 0.45074 (7) | 0.42774 (14) | 0.0409 (4) | |
| H20A | 0.828276 | 0.464904 | 0.494378 | 0.049* | |
| H20B | 0.619586 | 0.427418 | 0.442398 | 0.049* | |
| C21 | 0.6662 (4) | 0.49699 (7) | 0.36054 (15) | 0.0453 (4) | |
| H21A | 0.800002 | 0.522000 | 0.351000 | 0.068* | |
| H21B | 0.534931 | 0.515376 | 0.394092 | 0.068* | |
| H21C | 0.603886 | 0.483414 | 0.293211 | 0.068* |
| F1 | 0.0703 (7) | 0.0351 (5) | 0.0321 (5) | −0.0142 (5) | 0.0041 (5) | −0.0113 (4) |
| F2 | 0.0580 (6) | 0.0342 (5) | 0.0559 (7) | −0.0176 (5) | 0.0041 (5) | 0.0125 (5) |
| O1 | 0.0700 (8) | 0.0380 (6) | 0.0248 (6) | −0.0140 (6) | 0.0122 (5) | −0.0041 (5) |
| N1 | 0.0356 (6) | 0.0226 (6) | 0.0212 (6) | −0.0038 (5) | 0.0004 (5) | 0.0010 (4) |
| C1 | 0.0301 (7) | 0.0244 (7) | 0.0255 (7) | −0.0014 (5) | 0.0015 (5) | 0.0005 (6) |
| C2 | 0.0342 (7) | 0.0259 (7) | 0.0233 (7) | −0.0032 (6) | 0.0018 (6) | 0.0009 (6) |
| C3 | 0.0411 (8) | 0.0301 (7) | 0.0219 (7) | −0.0048 (6) | −0.0009 (6) | 0.0028 (6) |
| C4 | 0.0449 (9) | 0.0313 (8) | 0.0258 (8) | −0.0093 (6) | −0.0010 (6) | −0.0008 (6) |
| C5 | 0.0340 (7) | 0.0244 (7) | 0.0262 (7) | −0.0035 (6) | 0.0026 (6) | 0.0002 (6) |
| C6 | 0.0309 (7) | 0.0227 (7) | 0.0244 (7) | −0.0013 (5) | −0.0010 (5) | 0.0010 (5) |
| C7 | 0.0353 (7) | 0.0276 (7) | 0.0281 (7) | 0.0002 (6) | 0.0027 (6) | −0.0029 (6) |
| C8 | 0.0467 (9) | 0.0216 (7) | 0.0344 (8) | 0.0011 (6) | −0.0031 (7) | −0.0008 (6) |
| C9 | 0.0391 (8) | 0.0284 (8) | 0.0338 (8) | −0.0087 (6) | −0.0040 (6) | 0.0093 (6) |
| C10 | 0.0335 (7) | 0.0358 (8) | 0.0365 (9) | −0.0006 (6) | 0.0063 (6) | 0.0047 (6) |
| C11 | 0.0343 (7) | 0.0243 (7) | 0.0356 (8) | 0.0029 (6) | 0.0033 (6) | 0.0009 (6) |
| C12 | 0.0335 (7) | 0.0229 (7) | 0.0231 (7) | −0.0047 (5) | 0.0029 (5) | 0.0025 (5) |
| C13 | 0.0371 (8) | 0.0334 (8) | 0.0338 (8) | 0.0041 (6) | −0.0029 (6) | −0.0032 (6) |
| C14 | 0.0398 (8) | 0.0430 (9) | 0.0327 (9) | −0.0049 (7) | −0.0075 (7) | −0.0048 (7) |
| C15 | 0.0496 (9) | 0.0256 (7) | 0.0235 (7) | −0.0119 (6) | 0.0064 (6) | −0.0038 (6) |
| C16 | 0.0430 (8) | 0.0301 (8) | 0.0316 (8) | 0.0033 (6) | 0.0074 (6) | −0.0015 (6) |
| C17 | 0.0321 (7) | 0.0344 (8) | 0.0270 (7) | 0.0004 (6) | 0.0006 (6) | −0.0012 (6) |
| C18 | 0.0348 (7) | 0.0290 (7) | 0.0266 (7) | −0.0063 (6) | 0.0045 (6) | 0.0004 (6) |
| C19 | 0.0460 (9) | 0.0294 (8) | 0.0293 (8) | −0.0052 (6) | 0.0073 (6) | 0.0038 (6) |
| C20 | 0.0513 (10) | 0.0329 (8) | 0.0396 (9) | −0.0004 (7) | 0.0114 (8) | 0.0073 (7) |
| C21 | 0.0581 (11) | 0.0334 (9) | 0.0442 (10) | 0.0035 (8) | 0.0022 (8) | 0.0044 (7) |
| F1—C15 | 1.3559 (17) | C10—H10 | 0.9500 |
| F2—C9 | 1.3581 (17) | C10—C11 | 1.391 (2) |
| O1—C3 | 1.2096 (19) | C11—H11 | 0.9500 |
| N1—H1 | 1.0549 | C12—C13 | 1.384 (2) |
| N1—C1 | 1.4678 (17) | C12—C17 | 1.393 (2) |
| N1—C5 | 1.4590 (18) | C13—H13 | 0.9500 |
| C1—H1A | 1.0000 | C13—C14 | 1.388 (2) |
| C1—C2 | 1.5498 (19) | C14—H14 | 0.9500 |
| C1—C12 | 1.5128 (19) | C14—C15 | 1.370 (2) |
| C2—H2 | 1.0000 | C15—C16 | 1.373 (2) |
| C2—C3 | 1.522 (2) | C16—H16 | 0.9500 |
| C2—C18 | 1.5296 (19) | C16—C17 | 1.387 (2) |
| C3—C4 | 1.511 (2) | C17—H17 | 0.9500 |
| C4—H4A | 0.9900 | C18—H18A | 0.9900 |
| C4—H4B | 0.9900 | C18—H18B | 0.9900 |
| C4—C5 | 1.543 (2) | C18—C19 | 1.530 (2) |
| C5—H5 | 1.0000 | C19—H19A | 0.9900 |
| C5—C6 | 1.5121 (19) | C19—H19B | 0.9900 |
| C6—C7 | 1.389 (2) | C19—C20 | 1.517 (2) |
| C6—C11 | 1.391 (2) | C20—H20A | 0.9900 |
| C7—H7 | 0.9500 | C20—H20B | 0.9900 |
| C7—C8 | 1.388 (2) | C20—C21 | 1.520 (2) |
| C8—H8 | 0.9500 | C21—H21A | 0.9800 |
| C8—C9 | 1.373 (2) | C21—H21B | 0.9800 |
| C9—C10 | 1.372 (2) | C21—H21C | 0.9800 |
| C1—N1—H1 | 113.1 | C6—C11—C10 | 120.76 (14) |
| C5—N1—H1 | 111.4 | C6—C11—H11 | 119.6 |
| C5—N1—C1 | 112.32 (11) | C10—C11—H11 | 119.6 |
| N1—C1—H1A | 108.4 | C13—C12—C1 | 119.50 (13) |
| N1—C1—C2 | 109.37 (11) | C13—C12—C17 | 118.36 (14) |
| N1—C1—C12 | 108.87 (11) | C17—C12—C1 | 122.12 (13) |
| C2—C1—H1A | 108.4 | C12—C13—H13 | 119.3 |
| C12—C1—H1A | 108.4 | C12—C13—C14 | 121.38 (15) |
| C12—C1—C2 | 113.29 (11) | C14—C13—H13 | 119.3 |
| C1—C2—H2 | 107.8 | C13—C14—H14 | 120.9 |
| C3—C2—C1 | 107.73 (11) | C15—C14—C13 | 118.19 (15) |
| C3—C2—H2 | 107.8 | C15—C14—H14 | 120.9 |
| C3—C2—C18 | 112.44 (12) | F1—C15—C14 | 118.78 (15) |
| C18—C2—C1 | 113.01 (12) | F1—C15—C16 | 118.50 (15) |
| C18—C2—H2 | 107.8 | C14—C15—C16 | 122.72 (14) |
| O1—C3—C2 | 122.51 (14) | C15—C16—H16 | 120.9 |
| O1—C3—C4 | 122.15 (14) | C15—C16—C17 | 118.15 (15) |
| C4—C3—C2 | 115.25 (12) | C17—C16—H16 | 120.9 |
| C3—C4—H4A | 109.9 | C12—C17—H17 | 119.4 |
| C3—C4—H4B | 109.9 | C16—C17—C12 | 121.17 (14) |
| C3—C4—C5 | 109.09 (12) | C16—C17—H17 | 119.4 |
| H4A—C4—H4B | 108.3 | C2—C18—H18A | 108.7 |
| C5—C4—H4A | 109.9 | C2—C18—H18B | 108.7 |
| C5—C4—H4B | 109.9 | C2—C18—C19 | 114.09 (12) |
| N1—C5—C4 | 108.21 (12) | H18A—C18—H18B | 107.6 |
| N1—C5—H5 | 108.4 | C19—C18—H18A | 108.7 |
| N1—C5—C6 | 111.60 (12) | C19—C18—H18B | 108.7 |
| C4—C5—H5 | 108.4 | C18—C19—H19A | 108.8 |
| C6—C5—C4 | 111.70 (12) | C18—C19—H19B | 108.8 |
| C6—C5—H5 | 108.4 | H19A—C19—H19B | 107.7 |
| C7—C6—C5 | 119.12 (13) | C20—C19—C18 | 113.74 (13) |
| C7—C6—C11 | 118.74 (14) | C20—C19—H19A | 108.8 |
| C11—C6—C5 | 122.13 (13) | C20—C19—H19B | 108.8 |
| C6—C7—H7 | 119.4 | C19—C20—H20A | 109.0 |
| C8—C7—C6 | 121.23 (14) | C19—C20—H20B | 109.0 |
| C8—C7—H7 | 119.4 | C19—C20—C21 | 112.94 (14) |
| C7—C8—H8 | 121.0 | H20A—C20—H20B | 107.8 |
| C9—C8—C7 | 118.03 (14) | C21—C20—H20A | 109.0 |
| C9—C8—H8 | 121.0 | C21—C20—H20B | 109.0 |
| F2—C9—C8 | 118.78 (14) | C20—C21—H21A | 109.5 |
| F2—C9—C10 | 118.38 (15) | C20—C21—H21B | 109.5 |
| C10—C9—C8 | 122.84 (14) | C20—C21—H21C | 109.5 |
| C9—C10—H10 | 120.8 | H21A—C21—H21B | 109.5 |
| C9—C10—C11 | 118.34 (15) | H21A—C21—H21C | 109.5 |
| C11—C10—H10 | 120.8 | H21B—C21—H21C | 109.5 |
| F1—C15—C16—C17 | 178.97 (13) | C4—C5—C6—C11 | −88.66 (17) |
| F2—C9—C10—C11 | −177.84 (14) | C5—N1—C1—C2 | 64.80 (15) |
| O1—C3—C4—C5 | 123.39 (17) | C5—N1—C1—C12 | −170.93 (11) |
| N1—C1—C2—C3 | −54.89 (15) | C5—C6—C7—C8 | −176.87 (13) |
| N1—C1—C2—C18 | −179.73 (12) | C5—C6—C11—C10 | 177.54 (14) |
| N1—C1—C12—C13 | 102.72 (15) | C6—C7—C8—C9 | −0.6 (2) |
| N1—C1—C12—C17 | −75.42 (16) | C7—C6—C11—C10 | −1.5 (2) |
| N1—C5—C6—C7 | −148.28 (13) | C7—C8—C9—F2 | 178.51 (13) |
| N1—C5—C6—C11 | 32.63 (19) | C7—C8—C9—C10 | −1.8 (2) |
| C1—N1—C5—C4 | −64.54 (15) | C8—C9—C10—C11 | 2.5 (2) |
| C1—N1—C5—C6 | 172.17 (11) | C9—C10—C11—C6 | −0.7 (2) |
| C1—C2—C3—O1 | −124.44 (16) | C11—C6—C7—C8 | 2.2 (2) |
| C1—C2—C3—C4 | 52.03 (17) | C12—C1—C2—C3 | −176.53 (12) |
| C1—C2—C18—C19 | −155.74 (13) | C12—C1—C2—C18 | 58.63 (16) |
| C1—C12—C13—C14 | −179.62 (14) | C12—C13—C14—C15 | −0.5 (3) |
| C1—C12—C17—C16 | −179.67 (14) | C13—C12—C17—C16 | 2.2 (2) |
| C2—C1—C12—C13 | −135.36 (14) | C13—C14—C15—F1 | −178.24 (14) |
| C2—C1—C12—C17 | 46.50 (18) | C13—C14—C15—C16 | 1.7 (2) |
| C2—C3—C4—C5 | −53.09 (18) | C14—C15—C16—C17 | −1.0 (2) |
| C2—C18—C19—C20 | 66.24 (18) | C15—C16—C17—C12 | −1.0 (2) |
| C3—C2—C18—C19 | 82.03 (16) | C17—C12—C13—C14 | −1.4 (2) |
| C3—C4—C5—N1 | 55.98 (16) | C18—C2—C3—O1 | 0.7 (2) |
| C3—C4—C5—C6 | 179.22 (13) | C18—C2—C3—C4 | 177.20 (13) |
| C4—C5—C6—C7 | 90.43 (16) | C18—C19—C20—C21 | 170.21 (14) |
| H··· | ||||
| N1—H1···O1i | 1.05 | 2.06 | 3.0921 (16) | 165 |
| C7—H7···F1ii | 0.95 | 2.52 | 3.3291 (18) | 143 |
| C10—H10···O1iii | 0.95 | 2.66 | 3.470 (2) | 144 |
| C16—H16···F2iv | 0.95 | 2.62 | 3.3680 (18) | 136 |
| C21—H21 | 0.98 | 2.58 | 3.489 (2) | 154 |
| C21—H21 | 0.98 | 2.95 | 3.793 (2) | 145 |